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1.
Clin Immunol ; 259: 109876, 2024 02.
Article in English | MEDLINE | ID: mdl-38145857

ABSTRACT

Autoimmune tissues may contain ectopic germinal centers (EGCs). However, these structures have never been described in the liver of patients suffering from autoimmune hepatitis (AIH). We retrospectively reviewed histological features of 120 definite AIH cases, and found 10 cases harboring markers of EGCs. In these cases, CD21+ follicular dendritic cells were intermixed with CD3+ T and CD20+ B lymphocytes. The latter expressed the GC-specific marker bcl6, and some were proliferative as assessed by Ki67 expression. Antibody-secreting cells (ASCs) defined by expression of the mum-1 transcription factor and presence of cytoplasmic IgMs were usually present in the periphery of these structures, but some were also present within the EGCs. Notably, some ASCs were IgG-switched. Common treatment applied to AIH patients achieved biochemical normalization as efficiently as in patients without EGCs. In the present study, we provide the proof for the occurrence of functional EGCs enabling differentiation of B cells into ASCs and occurrence of immunoglobulin switch in AIH livers.


Subject(s)
Hepatitis, Autoimmune , Humans , Retrospective Studies , Germinal Center , B-Lymphocytes/metabolism
2.
Matrix Biol ; 120: 60-75, 2023 06.
Article in English | MEDLINE | ID: mdl-37201729

ABSTRACT

Multiple myeloma is a hematological neoplasm derived from plasma cells invariably developing in the bone marrow (BM). The persisting clinical challenge in MM resides in its high ability to resist drugs as shown by the frequent relapses observed in patients regardless of the treatment applied. In a mouse model of MM, we identified a subpopulation of cells harboring increased resistance to current MM drugs. These cells bound a proliferation inducing ligand (APRIL), a key MM promoting/survival factor. APRIL binding involved the heparan sulfate (HS) chain present on syndecan-1 (SDC-1), and correlated with reactivity to the anti-HS antibody 10e4. 10e4+cells had a high proliferation activity, and were able to form colonies in 3-D cultures. 10e4+ cells were the only cells able to develop in BM after intravenous injection. They also resisted drugs in vivo, since their number increased after treatment in BM. Notably, 10e4+ cells differentiated into 10e4- cells upon in vitro and in vivo expansion. Expression of one sulfotransferase, HS3ST3a1, allowed modification of syndecan-1 to confer reactivity to 10e4 and binding to APRIL. HS3ST3a1 deletion inhibited tumorigenesis in BM. Notably, the two populations coexisted at a variable frequency in the BM of MM patients at diagnosis. In total, our results indicate that 3-O-sulfation on SDC-1 carried out by HS3ST3a1 defines aggressive MM cells, and that targeting of this enzyme could possibly be used to better control drug resistance.


Subject(s)
Multiple Myeloma , Syndecan-1 , Animals , Mice , Bone Marrow/metabolism , Heparitin Sulfate/metabolism , Multiple Myeloma/genetics , Multiple Myeloma/metabolism , Sulfotransferases/genetics , Syndecan-1/genetics , Syndecan-1/metabolism
3.
Sci Rep ; 12(1): 8538, 2022 05 20.
Article in English | MEDLINE | ID: mdl-35595856

ABSTRACT

Physical stress is common in GI endoscopists, leading to musculoskeletal disorders. Considering the increasing complexity of interventional GI endoscopy with prolonged examination time, work-related musculoskeletal disorders have come into focus. However, data on work-related health stress in German endoscopists are elusive. The aim of this study was therefore to investigate the prevalence and consequences of work-related musculoskeletal disorders in German endoscopists. A 24-item questionnaire on endoscopy-associated musculoskeletal disorders and standardized pain assessment was developed by an interdisciplinary team of endoscopists and sports medics. The survey was distributed online by the leading German societies for gastroenterology and endoscopy. Overall, 151 German practicing endoscopists took part in the study. Regarding the average number of endoscopic procedures per week, the study collective consisted mainly of high-volume endoscopists. The survey showed that most participants suffered from general musculoskeletal disorders (82.8%) and from work-related musculoskeletal disorders (76.8%). The most affected body parts were the neck, low back, thumb, and shoulder. Temporary absence from work due to symptoms was reported by 9.9% of the respondents. Over 30% of participating endoscopists stated the need for analgesics or physiotherapy due to musculoskeletal disorders. Age, professional experience and work time were identified as relevant risk factors for musculoskeletal health issues. A high number of German endoscopists are affected by musculoskeletal disorders due to specific working postures and repetitive movements with a large impact on personal health. Further interventional studies are mandatory to improve the risk prevention of endoscopic activity.


Subject(s)
Musculoskeletal Diseases , Occupational Diseases , Endoscopy, Gastrointestinal/adverse effects , Germany/epidemiology , Humans , Musculoskeletal Diseases/epidemiology , Musculoskeletal Diseases/etiology , Occupational Diseases/epidemiology , Occupational Diseases/etiology , Occupational Diseases/prevention & control , Prevalence , Risk Factors , Surveys and Questionnaires
4.
Obes Surg ; 31(6): 2641-2648, 2021 06.
Article in English | MEDLINE | ID: mdl-33665755

ABSTRACT

BACKGROUND AND AIMS: Bariatric surgery provides a useful opportunity to perform intraoperative liver biopsy to screen for non-alcoholic steatohepatitis (NASH). There is currently no consensus on whether intraoperative liver biopsy should be systematically performed. The aim of this study was to develop and validate a decision tree to guide that choice. APPROACH AND RESULTS: This prospective study included 102 consecutive patients from the severe obesity outcome network (SOON) cohort in whom liver biopsy was systematically performed during bariatric surgery. A classification and regression tree (CART) was created to identify the nodes that best classified patients with and without NASH. External validation was performed. Seventy-one biopsies were of sufficient quality for analysis (median body mass index 43.3 [40.7; 48.0] kg/m2). NASH was diagnosed in 32.4% of cases. None of the patients with no steatosis on ultrasound had NASH. The only CART node that differentiated between a "high-risk" and a "low-risk" of NASH was alanine aminotransferase (ALT). ALT>53IU/L predicted NASH with a positive predictive value (PPV) of 68% and a negative predictive value (NPP) of 89%, a sensitivity of 77%, and a specificity of 84%. In the external cohort (n=258), PPV was 68%, NPV was 62%, sensitivity was 27%, and specificity was 90%. CONCLUSIONS: The present work supports intraoperative liver biopsy to screen for NASH in patients with ALT>53IU/L; however, patients with no steatosis on ultrasound should not undergo biopsy. The CART failed to identify an algorithm with a good sensitivity to screen for NASH in patients with ultrasonography-proven steatosis and ALT≤53IU/L.


Subject(s)
Bariatric Surgery , Non-alcoholic Fatty Liver Disease , Obesity, Morbid , Biopsy , Decision Trees , Humans , Liver/diagnostic imaging , Obesity, Morbid/surgery , Prospective Studies
7.
Diagn Interv Imaging ; 96(9): 941-6, 2015 Sep.
Article in English | MEDLINE | ID: mdl-25921626

ABSTRACT

PURPOSE: The goal of this study was to evaluate the diagnostic accuracy of a software program that automatically analyzes the liver surface to diagnose significant fibrosis, by comparing it to the subjective analysis of a radiologist and to transient elastography (Fibroscan(®)). PATIENTS AND METHODS: One hundred fourteen patients with chronic liver disease were included in the study. They underwent liver biopsy, FibroScan(®) and ultrasonographic examination of the liver surface. The liver surface was analyzed by a software program that gave a score of surface irregularities. This evaluation was compared to subjective analysis by a radiologist expert in liver imaging and by two general radiologists. RESULTS: Fifty percent of the patients had significant fibrosis according to the METAVIR score. The AUROC for the diagnosis of significant fibrosis by the software program was 0.80 (95%CI: 0.71-0.87), which was equivalent (P=0.86) to that of FibroScan(®) (0.81; 95%CI: 0.71-0.89). Results of the subjective analysis by the expert radiologist were poorer than those of the software analysis (P=0.02) (AUROC=0.66; 95%CI: 0.56-0.75). Interobserver agreement among radiologists was poor (0.25

Subject(s)
Image Interpretation, Computer-Assisted/methods , Liver Cirrhosis/diagnostic imaging , Liver/diagnostic imaging , Software , Adolescent , Adult , Aged , Aged, 80 and over , Biopsy , Diagnosis, Computer-Assisted/methods , Elasticity Imaging Techniques/methods , Female , Hepatitis, Chronic/diagnostic imaging , Hepatitis, Chronic/pathology , Humans , Liver/pathology , Liver Cirrhosis/pathology , Male , Middle Aged , Sensitivity and Specificity , Young Adult
8.
J Viral Hepat ; 19(2): e143-53, 2012 Feb.
Article in English | MEDLINE | ID: mdl-22239512

ABSTRACT

We evaluated whether quantitative measurements of liver fibrosis with recently developed diagnostics outperform histological staging in detecting natural or interferon-induced changes. We compared Metavir staging, morphometry (area and fractal dimension) and six blood tests in 157 patients with chronic hepatitis C from two trials testing maintenance interferon for 96 weeks. Paired liver biopsies and blood tests were available for 101 patients, and there was a significant improvement in Metavir activity and a significant increase in blood tests reflecting fibrosis quantity in patients treated with interferon when compared with controls - all per cent changes in histological fibrosis measures were significantly increased in F1 vs F2-4 stages only in the interferon group. For the whole population studied between weeks 0 and 96, there was significant progression only in the area of fibrosis (AOF) (P = 0.026), FibroMeter (P = 0.020) and CirrhoMeter (P = 0.003). With regards to dynamic reproducibility, agreement was good (r(ic) ≥ 0.72) only for Metavir fibrosis score, FibroMeter and CirrhoMeter. The per cent change in AOF was significantly higher than that of fractal dimension (P = 0.003) or Metavir fibrosis score (P = 0.015). CirrhoMeter was the only blood test with a change significantly higher than that of AOF (P = 0.039). AOF and two blood tests, reflecting fibrosis quantity, have high sensitivity and/or reproducibility permitting the detection of a small progression in liver fibrosis over two years. A blood test reflecting fibrosis quantity is more sensitive and reproducible than morphometry. The study also shows that maintenance interferon does not improve fibrosis, whatever its stage.


Subject(s)
Fibrosis/diagnosis , Hematologic Tests/methods , Hepatitis C, Chronic/complications , Hepatitis C, Chronic/drug therapy , Interferons/administration & dosage , Liver/pathology , Pathology, Clinical/methods , Adult , Aged , Antiviral Agents/administration & dosage , Biopsy , Clinical Trials as Topic , Female , Fibrosis/pathology , Humans , Male , Middle Aged , Reproducibility of Results , Sensitivity and Specificity
9.
Mem Inst Oswaldo Cruz ; 104(7): 1051-4, 2009 Nov.
Article in English | MEDLINE | ID: mdl-20027478

ABSTRACT

In an effort to unify the nomenclature of Trypanosoma cruzi, the causative agent of Chagas disease, an updated system was agreed upon at the Second Satellite Meeting. A consensus was reached that T. cruzi strains should be referred to by six discrete typing units (T. cruzi I-VI). The goal of a unified nomenclature is to improve communication within the scientific community involved in T. cruzi research. The justification and implications will be presented in a subsequent detailed report.


Subject(s)
Terminology as Topic , Trypanosoma cruzi/classification , Animals
11.
Arch Mal Coeur Vaiss ; 100(2): 121-5, 2007 Feb.
Article in French | MEDLINE | ID: mdl-17474497

ABSTRACT

The prevalence and characteristics of patients operated for adrenal adenoma (Conn syndrome) as well as their post-operative arterial pressure evolution are varying through literature. Our aim was to report the Grenoble University Hospital experience. From 1993 to 2005, 24 patients (mean age = 46 +/-11 years) presented the biological criteria of primary hyperaldosteronism and benefited from adrenalectomy with confirmation of adrenal adenoma. All had an uncontrolled hypertension, refractory in 42% of cases, with a hypokaliemia (mean = 2.65 +/- 0.47 mmol/l). All adenomas measured more than 10 mm in scanner imaging. After a mean post-operative follow-up of 46 +/- 43 months, 70% of them were normotensive, with (45%) or without (25%) anti-hypertensive therapy. the post-operative kaliemia was normal in all cases. Only 25% had post-operative hormonal dosages for control. Post-operative spontaneous normotensive patients had, at the diagnosis of adrenal adenoma, a more recent and non-refractory hypertension, with a lower number of antihypertensive drugs, a better response to spirinolactone and higher aldosterone plasmatic levels. Two lessons can be taken from this study: 1) Whether 70% of patients operated for adrenal adenoma are normotensive (with or without treatement) post-operatively, only 25% are definitely cured after 4 years. Factors associated to a post-operative cure highlight the interest of an ealy diagnosis. 2) There is probably an underdiagnosis of adrenal adenoma (Conn syndrome) because neither adenomas with normokaliemia, nor adenomas <10 mm in scanner imaging have ever been diagnosed or at least, sent to surgery.


Subject(s)
Adrenal Cortex Neoplasms/diagnosis , Adrenal Cortex Neoplasms/surgery , Adrenocortical Adenoma/diagnosis , Adrenocortical Adenoma/surgery , Adrenal Cortex Neoplasms/complications , Adrenalectomy , Adrenocortical Adenoma/complications , Adult , Blood Pressure , Female , Follow-Up Studies , Humans , Hyperaldosteronism/etiology , Male , Middle Aged , Prognosis , Retrospective Studies
13.
J Viral Hepat ; 13(10): 643-51, 2006 Oct.
Article in English | MEDLINE | ID: mdl-16970595

ABSTRACT

We have recently described a fibrosis index combining serum procollagen type III N-terminal peptide (PIIINP) and matrix metalloproteinase 1 (MMP-1) concentrations for evaluating the amount of liver fibrosis in chronic hepatitis C patients. The aims of the present study were to validate this score in another cohort of patients and to assess its variations along those of TIMP-1, hyaluronic acid (HA) and MMP-9 during antiviral treatment. Seventy-nine patients treated by interferon-alpha and ribavirin for 24 or 48 weeks were included. A liver biopsy was performed within the 6 months before the start of treatment. Serum markers were measured in serum collected the day of the liver biopsy, at start of treatment, and every 3 months during treatment and a 6-month follow-up period. The PIIINP/MMP-1 index was significantly correlated to the METAVIR fibrosis (r = 0.68, P < 0.001). Its overall diagnostic value defined by the area under the receiver operating characteristics curves was 0.77 for discriminating F1 vs F2F3F4, and 0.81 for discriminating F1F2 vs F3F4, and was better than that observed for HA and TIMP-1. At the end of follow-up, the PIIINP/MMP-1 index significantly decreased in responders and remained stable in nonresponder patients. This decrease occurred early and continued regularly during the treatment period. This variation was because of both a decrease of PIIINP and an increase of MMP-1 concentrations. HA and TIMP-1 serum concentrations were also significantly lower at the end of follow-up in responder patients, but early changes were minimal and not influenced by the response to treatment. Our study shows that a noninvasive index combining PIIINP and MMP-1 is a useful tool to follow-up fibrosis change during and after antiviral therapy chronic hepatitis C patients.


Subject(s)
Hepatitis C, Chronic/diagnosis , Interferon-alpha/therapeutic use , Liver Cirrhosis/diagnosis , Matrix Metalloproteinase 1/blood , Peptide Fragments/blood , Procollagen/blood , Ribavirin/therapeutic use , Adult , Antiviral Agents/therapeutic use , Biomarkers/blood , Biopsy , Contraindications , Female , Hepatitis C, Chronic/blood , Hepatitis C, Chronic/drug therapy , Hepatitis C, Chronic/pathology , Humans , Hyaluronic Acid/blood , Liver Cirrhosis/blood , Liver Cirrhosis/drug therapy , Liver Cirrhosis/pathology , Longitudinal Studies , Male , Matrix Metalloproteinase 9/blood , Middle Aged , Retrospective Studies , Tissue Inhibitor of Metalloproteinase-1/blood
14.
Parasitology ; 129(Pt 5): 537-47, 2004 Nov.
Article in English | MEDLINE | ID: mdl-15552399

ABSTRACT

The biodiversity of insect trypanosomes is largely unknown, resulting in significant gaps in the understanding of pathogen evolution. A culture-independent preliminary survey of trypanosomatid fauna was conducted for the parasites of Heteroptera (Hemiptera) from several localities in Costa Rica. Trypanosomatid infections were detected by light microscopy of smeared gut contents. Out of 257 insects representing 6 families, infections were found in 62 cases; cultures were obtained for 29 new isolates. Gut material from infected hosts was preserved in the field using an SDS-EDTA buffer solution for subsequent DNA extraction in the laboratory. PCR amplification of the trypanosomatid-specific spliced leader (SL) RNA gene repeats was successful for 60 field samples. Eighteen distinct SL RNA typing units were identified in a set of 28 samples analysed in detail. Cluster analysis indicated that these typing units were unique and thus could represent new species and, in some cases, new genera. This study reveals only a minor fraction of the trypanosomatid biodiversity, which is anticipated to be high.


Subject(s)
Biodiversity , Heteroptera/parasitology , RNA, Spliced Leader/genetics , Trypanosomatina/classification , Trypanosomatina/isolation & purification , Animals , Base Sequence , Cluster Analysis , Costa Rica , DNA, Protozoan/analysis , Exons , Gene Amplification , Genotype , Molecular Sequence Data , Phylogeny , Polymerase Chain Reaction , RNA, Protozoan/genetics , Sequence Alignment , Sequence Homology, Nucleic Acid , Trypanosomatina/genetics
15.
Ann Chir ; 129(2): 100-2, 2004 Mar.
Article in French | MEDLINE | ID: mdl-15050181

ABSTRACT

Authors report on a case of one intramuscular metastasis from a non-medullary differentiated thyroid carcinoma. Muscular metastasis are rare in this pathology. Moreover, body-scanning scintigraphic interpretation is difficult for the pelvic area. False-positive are numerous and a very precise topographical diagnosis is required to choose the best surgical approach. Authors propose a specific management of different imaging methods for such a metastatic site. They associate a CT scan and a multiplanar iodine and technetium scintigraphy.


Subject(s)
Adenocarcinoma, Follicular/secondary , Muscle Neoplasms/secondary , Pelvic Floor , Thyroid Neoplasms , Adenocarcinoma, Follicular/radiotherapy , Adenocarcinoma, Follicular/surgery , Adult , Female , Follow-Up Studies , Humans , Iodine Radioisotopes/therapeutic use , Muscle Neoplasms/diagnostic imaging , Muscle Neoplasms/surgery , Ovarian Cysts/diagnosis , Ovarian Cysts/surgery , Ovariectomy , Radionuclide Imaging , Thyroid Neoplasms/radiotherapy , Time Factors , Tomography, X-Ray Computed
16.
Parasitology ; 127(Pt 3): 265-71, 2003 Sep.
Article in English | MEDLINE | ID: mdl-12964829

ABSTRACT

Trypanosomes isolated from South American bats include the human pathogen Trypanosoma cruzi. Other Trypanosoma spp. that have been found exclusively in bats are not well characterized at the DNA sequence level and we have therefore used the SL RNA gene to differentiate and characterize kinetoplastids isolated from bats in South America. A Trypanosoma sp. isolated from hats in southern Brazil was compared with the geographically diverse isolates T. cruzi marinkellei, T. vespertilionis, and T. dionisii. Analysis of the SL RNA gene repeats revealed size and sequence variability among these bat trypanosomes. We have developed hybridization probes to separate these bat isolates and have analysed the DNA sequence data to estimate their relatedness. A new species, Trypanosoma desterrensis sp. n., is proposed, for which a 5S rRNA gene was also found within the SL RNA repeat.


Subject(s)
Chiroptera/parasitology , Trypanosoma/isolation & purification , Animals , Base Sequence , Brazil , DNA, Protozoan/chemistry , DNA, Protozoan/genetics , Molecular Sequence Data , Nucleic Acid Conformation , Phylogeny , Polymerase Chain Reaction , RNA, Spliced Leader/chemistry , RNA, Spliced Leader/genetics , Sequence Alignment , Trypanosoma/classification , Trypanosoma/genetics
17.
Histopathology ; 42(2): 156-66, 2003 Feb.
Article in English | MEDLINE | ID: mdl-12558748

ABSTRACT

AIMS: Monoclonal antibody 34betaE12 (Ck34betaE12) recognizes a set of cytokeratins (1, 5, 10, 14) expressed in normal stratified squamous epithelium. We have recently reported its expression in squamous cell carcinoma and basaloid carcinoma, in contrast to large cell neuroendocrine carcinoma, an entity with overlapping morphological features with basaloid carcinoma. We have now examined the role of Ck34betaE12 in discriminating between neuroendocrine and non-neuroendocrine proliferations. METHODS AND RESULTS: We performed an immunohistochemical study of 228 cases, comprising the whole spectrum of lung neuroendocrine proliferations and tumours. All cases of neuroendocrine cell hyperplasia (n = 15), tumorlet (n = 23), typical carcinoid (n = 27) and atypical carcinoid (n = 23) were completely negative for Ck34betaE12. Although the neuroendocrine cells of small cell lung carcinoma and large cell neuroendocrine carcinoma were consistently negative, a strong and diffuse positive staining was found in the non-neuroendocrine components of combined small cell carcinoma (three of eight cases) and combined large cell neuroendocrine carcinoma (11 of 12 cases). In addition, scattered Ck34betaE12+ cells were noted in 11 of 64 (17%) large cell neuroendocrine carcinoma and in seven of 56 (12.5%) small cell carcinoma, which were not obviously histologically combined. This heterogeneity of high-grade neuroendocrine tumours was not observed in carcinoids which lack Ck34betaE12 clusters of reactive cells. There was mutual exclusion between expression of neuroendocrine markers and that of Ck34betaE12. CONCLUSION: We conclude that 34betaE12 expression excludes the neuroendocrine nature of tumour cells and uncovers the real frequency of combined forms in high-grade neuroendocrine tumours.


Subject(s)
Carcinoma, Neuroendocrine/metabolism , Carcinoma, Small Cell/metabolism , Keratins/metabolism , Biomarkers, Tumor/metabolism , Carcinoma, Neuroendocrine/pathology , Carcinoma, Small Cell/pathology , Fluorescent Antibody Technique, Indirect , Humans , Hyperplasia , Immunoenzyme Techniques , Lung Neoplasms
18.
Ann Trop Med Parasitol ; 96(8): 755-64, 2002 Dec.
Article in English | MEDLINE | ID: mdl-12625929

ABSTRACT

There is a high level of genetic diversity among the clinical isolates of the taxon Trypanosoma cruzi. The results of recent studies on well defined gene loci have revealed that T. cruzi can be divided into two major phylogenetic lineages, designated T. cruzi I and T. cruzi II. Further intra-lineage polymorphisms were explored, in clinical isolates from five representative regions of Brazil, using the internal transcribed spacers that flank the 5.8S ribosomal RNA gene. These regions were amplified in a PCR and the products were digested with six restriction enzymes before being subjected to RFLP analysis in polyacrylamide gels. The results were used to construct a complex evolutionary tree, in which the isolates were clustered into two major phylogenetic lineages with a low level of similarity. To investigate the evolutionary relationships between the isolates, the PCR products were cloned and sequenced. The results of the subsequent phylogenetic analysis confirmed the presence of the two major groups of T. cruzi and showed that zymodeme 3, a third iso-enzymatic sub-group, is closer to T. cruzi I than to T. cruzi II.


Subject(s)
RNA, Ribosomal/genetics , Trypanosoma cruzi/genetics , Animals , Brazil , DNA, Kinetoplast/genetics , DNA, Ribosomal Spacer/genetics , Phylogeny , Polymorphism, Restriction Fragment Length , RNA, Protozoan/genetics , Trypanosoma cruzi/classification
19.
FEMS Microbiol Lett ; 204(2): 233-7, 2001 Nov 13.
Article in English | MEDLINE | ID: mdl-11731128

ABSTRACT

The spliced leader RNA genes of Bodo saltans, Cryptobia helicis and Dimastigella trypaniformis were analyzed as molecular markers for additional taxa within the suborder Bodonina. The non-transcribed spacer regions were distinctive for each organism, and 5S rRNA genes were present in Bodo and Dimastigella but not in C. helicis. Two sequence classes of 5S rRNA were evident from analysis of the bodonid genes. The two classes of 5S rRNA genes were found in other Kinetoplastids independent of co-localization with the spliced leader RNA gene.


Subject(s)
Genes, rRNA , Kinetoplastida/genetics , RNA, Ribosomal, 5S/genetics , RNA, Spliced Leader/genetics , Animals , Base Sequence , Cloning, Molecular , Exons/genetics , Genes, Protozoan , Kinetoplastida/growth & development , Molecular Sequence Data , RNA, Protozoan/genetics , Sequence Analysis, DNA
20.
FEMS Microbiol Lett ; 205(1): 65-9, 2001 Nov 27.
Article in English | MEDLINE | ID: mdl-11728717

ABSTRACT

We report the cloning and sequencing of the first minicircle from a phloem-restricted, pathogenic Phytomonas sp. (Hart 1) isolated from a coconut palm with hartrot disease. The minicircle possessed a two-domain structure of two conserved regions, each containing three conserved sequence blocks (CSB). Based on the sequence around CSB 3 from Hart 1, PCR primers were designed to allow specific amplification of Phytomonas minicircles. This primer pair demonstrated specificity for at least six groups of plant trypanosomatids and did not amplify from insect trypanosomatids. The PCR results were consistent with a two-domain structure for other plant trypanosomatids.


Subject(s)
DNA, Circular/chemistry , DNA, Kinetoplast/chemistry , Plant Diseases/parasitology , Trees/parasitology , Trypanosomatina/genetics , Animals , Base Sequence , Cloning, Molecular , Cocos , Conserved Sequence , DNA, Circular/genetics , DNA, Kinetoplast/genetics , Molecular Sequence Data , Polymerase Chain Reaction , Sequence Analysis, DNA , Trees/ultrastructure
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