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1.
Nat Commun ; 15(1): 3527, 2024 Apr 25.
Article in English | MEDLINE | ID: mdl-38664390

ABSTRACT

We present an interpretable implementation of the autoencoding algorithm, used as an anomaly detector, built with a forest of deep decision trees on FPGA, field programmable gate arrays. Scenarios at the Large Hadron Collider at CERN are considered, for which the autoencoder is trained using known physical processes of the Standard Model. The design is then deployed in real-time trigger systems for anomaly detection of unknown physical processes, such as the detection of rare exotic decays of the Higgs boson. The inference is made with a latency value of 30 ns at percent-level resource usage using the Xilinx Virtex UltraScale+ VU9P FPGA. Our method offers anomaly detection at low latency values for edge AI users with resource constraints.

2.
J Hosp Infect ; 130: 52-55, 2022 Dec.
Article in English | MEDLINE | ID: mdl-36087803

ABSTRACT

BACKGROUND: Macroscopic contamination of orthopaedic instruments with particulates, including cortical bone and polymethyl methacrylate (PMMA) bone cement, that have previously undergone pre-operative sterilization is frequently encountered peri- or intraoperatively, calling into question the sterility of such instruments. AIM: To determine if macroscopic contaminants of orthopaedic surgical instrumentation maintain a bacterial burden following sterile processing, and to determine the most commonly contaminated instruments and the most common contaminants. METHODS: Macroscopic contaminants in orthopaedic instrument trays were collected prospectively at a single tertiary referral centre over a 6-month period from August 2021 to May 2022. When identified, these specimens were swabbed and plated on sheep blood agar. All specimens were incubated at 37 °C for 14 days, and inspected visually for colony formation. When bacterial colony formation was identified, samples were sent for species identification. RESULTS: In total, 33 contaminants were tested, and only one contaminant was found to be growing bacterial colonies (Corynebacterium sp.). The items most commonly found to have macroscopic contamination were surgical trays (N=9) and cannulated drills (N=7). The identifiable contaminants were bone (N=10), PMMA bone cement (N=4) and hair (N=4). Eleven macroscopic contaminants were not identifiable. CONCLUSION: This study found that 97% of macroscopic orthopaedic surgical instrument contaminants that underwent sterile processing did not possess a bacterial burden. Contaminants discovered during a procedure are likely to be sterile, and do not pose a substantially increased risk of infection to a patient.


Subject(s)
Orthopedics , Animals , Sheep , Orthopedics/methods , Polymethyl Methacrylate , Bone Cements , Prevalence , Sterilization/methods , Surgical Instruments/microbiology , Bacteria
3.
J Hosp Infect ; 118: 59-62, 2021 Dec.
Article in English | MEDLINE | ID: mdl-34637851

ABSTRACT

BACKGROUND: With the high costs of operating room time, minimizing potential causes of time waste is financially beneficial to surgeons and hospitals. The time needed to activate a chlorhexidine gluconate surgical solution applicator presents an opportunity for optimization. Many techniques are employed to expedite the process, but there have been no studies comparing these techniques. AIM: To determine the most efficient method for utilizing a chlorhexidine gluconate surgical prep applicator. METHODS: Six techniques were tested to determine which caused the sponge of a Chloraprep™ applicator to become saturated quickest. These were a single squeeze (control), up-and-down shaking, side-to-side shaking, pressing the sponge on a surface (dab), pressing with cotton swabs (poke), and continuously squeezing the lever of the applicator. The time between the internal glass breaking in the applicator to the time of sponge saturation with solution was measured for each technique. Times were then compared to determine which technique best expedited the process. FINDINGS: The side-to-side shake, up-and-down shake, and 'dab' techniques were each significantly faster than the control group. Side-to-side shaking had the fastest time to sponge saturation on average. The average difference in time to saturation between the side-to-side shake technique and the 'poke' technique may be as much as 27.5 s. CONCLUSIONS: Utilization of the side-to-side shake technique, as well as the up-and-down shake and 'dab' techniques, significantly expedite the time it takes to use a chlorhexidine gluconate applicator. The time savings from employing these techniques could result in significant financial benefits.


Subject(s)
Anti-Infective Agents, Local , Chlorhexidine , Chlorhexidine/analogs & derivatives , Humans , Surgical Wound Infection
4.
Biophys Rev ; 10(3): 941, 2018 06.
Article in English | MEDLINE | ID: mdl-29388160

ABSTRACT

In the original version of this article, the name of one of the authors is not correct. The correct name should be W. A. Linke, which is shown correctly in the authorgroup section above.

5.
Biophys Rev ; 9(4): 431-441, 2017 08.
Article in English | MEDLINE | ID: mdl-28808947

ABSTRACT

The Sydney Heart Bank (SHB) is one of the largest human heart tissue banks in existence. Its mission is to provide high-quality human heart tissue for research into the molecular basis of human heart failure by working collaboratively with experts in this field. We argue that, by comparing tissues from failing human hearts with age-matched non-failing healthy donor hearts, the results will be more relevant than research using animal models, particularly if their physiology is very different from humans. Tissue from heart surgery must generally be used soon after collection or it significantly deteriorates. Freezing is an option but it raises concerns that freezing causes substantial damage at the cellular and molecular level. The SHB contains failing samples from heart transplant patients and others who provided informed consent for the use of their tissue for research. All samples are cryopreserved in liquid nitrogen within 40 min of their removal from the patient, and in less than 5-10 min in the case of coronary arteries and left ventricle samples. To date, the SHB has collected tissue from about 450 failing hearts (>15,000 samples) from patients with a wide range of etiologies as well as increasing numbers of cardiomyectomy samples from patients with hypertrophic cardiomyopathy. The Bank also has hearts from over 120 healthy organ donors whose hearts, for a variety of reasons (mainly tissue-type incompatibility with waiting heart transplant recipients), could not be used for transplantation. Donor hearts were collected by the St Vincent's Hospital Heart and Lung transplantation team from local hospitals or within a 4-h jet flight from Sydney. They were flushed with chilled cardioplegic solution and transported to Sydney where they were quickly cryopreserved in small samples. Failing and/or donor samples have been used by more than 60 research teams around the world, and have resulted in more than 100 research papers. The tissues most commonly requested are from donor left ventricles, but right ventricles, atria, interventricular system, and coronary arteries vessels have also been reported. All tissues are stored for long-term use in liquid N or vapor (170-180 °C), and are shipped under nitrogen vapor to avoid degradation of sensitive molecules such as RNAs and giant proteins. We present evidence that the availability of these human heart samples has contributed to a reduction in the use of animal models of human heart failure.

6.
Bull Environ Contam Toxicol ; 93(4): 442-5, 2014 Oct.
Article in English | MEDLINE | ID: mdl-25168694

ABSTRACT

The sensitivity of Danio rerio to three chemicals was compared at two growth stages [larval (10 ± 2 after hatching) and post-larval (60 ± 4 days after hatching)] based on acute toxicity tests. Thirty-nine 48 h acute toxicity tests were performed with the substances CuSO4, NaCl and KCl. The 48 h LC50 values at the two growth stages were compared by independent samples t-tests. The results showed a clear decrease in sensitivity when post-larval organisms were used. Since acute toxicity test methods for D. rerio that recommend using post-larval stage fish do not represent the most sensitive stage of the test organism, our study suggests a revision of the methods to use larval fish.


Subject(s)
Copper Sulfate/toxicity , Models, Animal , Potassium Chloride/toxicity , Sodium Chloride/toxicity , Toxicity Tests, Acute/methods , Zebrafish/metabolism , Age Factors , Animals , Larva/drug effects , Lethal Dose 50
7.
Am J Physiol Heart Circ Physiol ; 305(1): H52-65, 2013 Jul 01.
Article in English | MEDLINE | ID: mdl-23666674

ABSTRACT

Mutations in cardiac myosin binding protein C (MyBP-C) are a common cause of familial hypertrophic cardiomyopathy (FHC). The majority of MyBP-C mutations are expected to reduce MyBP-C expression; however, the consequences of MyBP-C deficiency on the regulation of myofilament function, Ca²âº homeostasis, and in vivo cardiac function are unknown. To elucidate the effects of decreased MyBP-C expression on cardiac function, we employed MyBP-C heterozygous null (MyBP-C+/-) mice presenting decreases in MyBP-C expression (32%) similar to those of FHC patients carrying MyBP-C mutations. The levels of MyBP-C phosphorylation were reduced 53% in MyBP-C+/- hearts compared with wild-type hearts. Skinned myocardium isolated from MyBP-C+/- hearts displayed decreased cross-bridge stiffness at half-maximal Ca²âº activations, increased steady-state force generation, and accelerated rates of cross-bridge recruitment at low Ca²âº activations (<15% and <25% of maximum, respectively). Protein kinase A treatment abolished basal differences in rates of cross-bridge recruitment between MyBP-C+/- and wild-type myocardium. Intact ventricular myocytes from MyBP-C+/- hearts displayed abnormal sarcomere shortening but unchanged Ca²âº transient kinetics. Despite a lack of left ventricular hypertrophy, MyBP-C+/- hearts exhibited elevated end-diastolic pressure and decreased peak rate of LV pressure rise, which was normalized following dobutamine infusion. Furthermore, electrocardiogram recordings in conscious MyBP-C+/- mice revealed prolonged QRS and QT intervals, which are known risk factors for cardiac arrhythmia. Collectively, our data show that reduced MyBP-C expression and phosphorylation in the sarcomere result in myofilament dysfunction, contributing to contractile dysfunction that precedes compensatory adaptations in Ca²âº handling, and chamber remodeling. Perturbations in mechanical and electrical activity in MyBP-C+/- mice could increase their susceptibility to cardiac dysfunction and arrhythmia.


Subject(s)
Carrier Proteins/metabolism , Muscle Contraction , Myocardium/metabolism , Sarcomeres/metabolism , Action Potentials , Animals , Calcium/metabolism , Calcium Signaling , Carrier Proteins/genetics , Heart/physiology , Heart Rate , Heart Ventricles/cytology , Heterozygote , Mice , Mutation , Phosphorylation , Sarcomeres/physiology , Transcription, Genetic
8.
Horm Metab Res ; 41(2): 132-6, 2009 Feb.
Article in English | MEDLINE | ID: mdl-19214923

ABSTRACT

So far little is known about how the antidiabetic drugs acting at the level of gastrointestinal mucosa may affect immune and cellular response to food intake. The following study investigated the association between acarbose treatment and postprandial metabolism, immune- and inflammatory activity in patients with early type 2 diabetes: The Acarbose action on low grade Inflammation and Immune response in type 2 Diabetes on Atherosclerosis risk (AIIDA) study. Middle-aged patients (n=87) with early type 2 diabetes (2 h-plasma-glucose >or=11.1 mmol/l and/or HbA1c >or=6.5%) and sub-clinical inflammation (leucocytes >or=6.2 GPt/l and/or hsCRP >or=1.0 mg/l) underwent a mixed meal load (527 kcal). Metabolic parameters and markers of subclinical inflammation were measured at fasting (0'), 2 h-postprandial (2-hpp) and 4-hpp before and after 20 weeks of treatment with acarbose or placebo. Leukocytes and lymphocytes excursion after 20 weeks of treatment was significantly reduced with acarbose 4 h after testmeal [GPt/l] (7.5 vs. 7; p<0.05; and 2.29 vs. 2.14; p<0.05, respectively). Acarbose had only marginal effects on pp glucose, FFA, triglycerides, and insulin excursion. Biomarkers of inflammation (hsCRP, MBL, and PAI1) were not affected by acarbose. Multivariate analysis reveals only baseline leukocytes and of acarbose as independent determinant of 4-h leucocytes excursion. Postprandial metabolic and inflammatory parameters were strongly interrelated. These results suggest pleiotropic effects of acarbose, which may contribute to its vasoprotective potentials.


Subject(s)
Acarbose/therapeutic use , Diabetes Mellitus, Type 2/drug therapy , Diabetes Mellitus, Type 2/immunology , Hypoglycemic Agents/therapeutic use , Leukocytes, Mononuclear/drug effects , Adult , Aged , Blood Glucose/drug effects , Diabetes Mellitus, Type 2/blood , Female , Humans , Insulin/blood , Leukocyte Count , Leukocytes, Mononuclear/immunology , Male , Middle Aged , Placebo Effect , Treatment Outcome , Triglycerides/blood
9.
Dtsch Med Wochenschr ; 134(7): 291-7, 2009 Feb.
Article in German | MEDLINE | ID: mdl-19197810

ABSTRACT

INTRODUCTION: The efficacy of a multifactorial intervention with antihypertensive drugs, statins and acetylsalicylic acid was shown in the STENO 2 trial of diabetic patients with microalbuminuria. But how good is clinical practice in Germany? The DIG (Diabetes in Germany) study was an prospective survey, analysing the quality of risk factor control and treatment patterns of type 2 diabetics over 4 years between 2002 and 2007. METHODS: A total of 4020 type 2 diabetics (aged 35 - 80 years) were recruited by 238 physicians across Germany. Their medical history, risk factor profile and clinical data were recorded. The quality of control of diabetes, hypertension or hyperlipidemia and the use of aspirin were assessed in 2914 patients at baseline and after 3,7 years. RESULTS: The mean HbA (1c) value was 6,98 % at baseline and 7,03 at the study end. 42,9 % at the beginning vs. 36,9 % at follow-up had HbA (1c) values above the target level of 6,5 %. Mean blood pressure was 139,3/80.0 compared with 137,3/79.9 mm Hg (p < 0,01), while 24,1 % and 27,0 %, respectively had values above the target level. Mean LDL-cholesterol levels were 3,23 mmol/l and 2,93 mmol/l, respectively, but only 23,2 % and 30,4 % of patients, respectively, reached target levels. There was a significant increase in the use of antihypertensive drugs, statins and acetylsalicylic acid over the four-year period. CONCLUSION: Type 2 diabetics in Germany received an acceptable level of treatment for hyperglycaemia, but still more than 60 % of the patients have HbA (1c) values higher than 6,5 %. There are serious deficits in the management of hypertension, hypercholesterolemia and the use of aspirin. Because intensive, multifactorial care of type 2 diabetics leads to reduced rates of death and cardiovascular disorders, these results indicate that the early and meticulous implementation of current treatment guidelines remains a major challenge.


Subject(s)
Cardiovascular Diseases/prevention & control , Diabetes Complications/prevention & control , Diabetes Mellitus, Type 2/therapy , Glycated Hemoglobin/analysis , Hypoglycemic Agents/therapeutic use , Quality of Health Care , Adult , Aged , Aged, 80 and over , Antihypertensive Agents/therapeutic use , Aspirin/therapeutic use , Cardiovascular Diseases/blood , Cardiovascular Diseases/epidemiology , Diabetes Complications/blood , Diabetes Complications/epidemiology , Diabetes Mellitus, Type 2/blood , Diabetes Mellitus, Type 2/epidemiology , Female , Follow-Up Studies , Germany/epidemiology , Humans , Hyperlipidemias/complications , Hyperlipidemias/drug therapy , Hyperlipidemias/epidemiology , Hypertension/complications , Hypertension/drug therapy , Hypertension/epidemiology , Hypolipidemic Agents/therapeutic use , Male , Middle Aged , Prospective Studies , Risk Factors
10.
Rev Sci Instrum ; 79(2 Pt 2): 02A501, 2008 Feb.
Article in English | MEDLINE | ID: mdl-18315122

ABSTRACT

The converter-type negative ion source currently employed at the Los Alamos Neutron Science Center (LANSCE) is based on cesium enhanced surface production of H(-) ion beams in a filament-driven discharge. In this kind of an ion source the extracted H(-) beam current is limited by the achievable plasma density which depends primarily on the electron emission current from the filaments. The emission current can be increased by increasing the filament temperature but, unfortunately, this leads not only to shorter filament lifetime but also to an increase in metal evaporation from the filament, which deposits on the H(-) converter surface and degrades its performance. Therefore, we have started an ion source development project focused on replacing these thermionic cathodes (filaments) of the converter source by a helicon plasma generator capable of producing high-density hydrogen plasmas with low electron energy. In our studies which have so far shown that the plasma density of the surface conversion source can be increased significantly by exciting a helicon wave in the plasma, and we expect to improve the performance of the surface converter H(-) ion source in terms of beam brightness and time between services. The design of this new source and preliminary results are presented, along with a discussion of physical processes relevant for H(-) ion beam production with this novel design. Ultimately, we perceive this approach as an interim step towards our long-term goal, combining a helicon plasma generator with an SNS-type main discharge chamber, which will allow us to individually optimize the plasma properties of the plasma cathode (helicon) and H(-) production (main discharge) in order to further improve the brightness of extracted H(-) ion beams.

11.
Rev Sci Instrum ; 79(2 Pt 2): 02A514, 2008 Feb.
Article in English | MEDLINE | ID: mdl-18315135

ABSTRACT

We present results on two different aspects that affect surface converter H(-) ion source performance: tungsten filament material and converter/wall temperature control. On the tungsten material aspect, evidence that filament grain size affects the source performance as well as filament failure modes is shown. Materials with impurity contents that hinder grain growth during conditioning or operation are to be avoided in order to increase the filament lifetime. Regarding the temperature control of the converter and plasma chamber walls, we present results of increased current output of up to 2.5 mA (15%). This is explained by generating increased cesium vapor pressure leading to enhanced sputtering of H(-) ions.

12.
Phys Rev E Stat Nonlin Soft Matter Phys ; 65(1 Pt 1): 011709, 2002 Jan.
Article in English | MEDLINE | ID: mdl-11800709

ABSTRACT

We study dynamical processes in a multidomain (MD) structured nematic liquid crystal cell with a particular emphasis on the motion, creation, and annihilation of disclinations. In the MD cell right- and left-handed director helices alternate due to a special choice of the director pretilt angles at the surfaces. As a result, a net of twist disclinations occurs. We have implemented a numerical algorithm based on a pure rotational dynamics of the director field to monitor the motion of the defect lines during the switching process, i.e., when an electric voltage is applied to or removed from the cell. We demonstrate that the total light transmission vs time is not affected by the presence of the defects compared to a conventional twisted nematic cell. If the pretilt angles at the surfaces are sufficiently small, the twisting sense of one species of helices is reversed and a configuration free of defects occurs. On the other hand, for an applied voltage twist disclinations close to the surface have to exist. Therefore, defect lines are created or they annihilate during the switching process. We investigate these situations in detail and reveal the underlying mechanisms.

13.
Phys Rev E Stat Nonlin Soft Matter Phys ; 63(2 Pt 1): 021510, 2001 Feb.
Article in English | MEDLINE | ID: mdl-11308501

ABSTRACT

Surface-induced profiles of both nematic and smectic order parameters in a nematic liquid crystal, ranging from an orienting substrate to "infinity," were evaluated numerically on the basis of an extended Landau theory. In order to obtain a smooth behavior of the solutions at "infinity," a boundary energy functional was derived by linearizing the Landau energy around its equilibrium solutions. We find that the intrinsic wave number of the smectic structure, which plays the role of a coupling between nematic and smectic order, strongly influences the director reorientation. Whereas the smectic order is rapidly decaying when moving away from the surface, the uniaxial nematic order parameter shows an oscillatory behavior close to the substrate, accompanied by a nonzero local biaxiality.

14.
Biochem Genet ; 35(9-10): 327-35, 1997 Oct.
Article in English | MEDLINE | ID: mdl-9475957

ABSTRACT

Randomly amplified polymorphic DNA (RAPD) was used to examine possible origin of Varroa jacobsoni Oudemans in the Americas. Among 64 primers screened, 2 primers provided variation which was informative for this study. All V. jacobsoni collected from the United States had the same banding pattern to that of mites collected from Russia, Morocco, Germany, Italy, Spain, and Portugal (Russian pattern). This banding pattern was different from the pattern found for mites collected from Japan, Brazil, and Puerto Rico (Japanese pattern). The Japanese pattern lacked a 766-bp band found in the Russian pattern (OPE-07). With primer OPP-03, the Russian pattern had a distinct band at 442 bp not found in the Japanese pattern. Two bands located at 675 and 412 bp were specific to the Japanese pattern. These results suggest that the V. jacobsoni of the United States is probably predominantly Russian in origin (via Europe), while the V. jacobsoni of Brazil and Puerto Rico are probably predominantly Japanese in origin.


Subject(s)
Mites/genetics , Americas , Animals , Bees/parasitology , DNA/analysis , DNA/genetics , DNA Primers/chemistry , Female , Genetic Markers/genetics , Mites/parasitology , Random Amplified Polymorphic DNA Technique
16.
Suicide Life Threat Behav ; 25(2): 241-52, 1995.
Article in English | MEDLINE | ID: mdl-7570785

ABSTRACT

Twenty adolescents who had made suicide attempts were compared with 20 nonpsychiatric control subjects on measures of problem solving, stress, and coping. The suicidal group did not show evidence of "rigid" thinking or of deficits in the ability to generate solutions to standardized interpersonal problems. However, they did report recent histories of more severe life stress and had inaccurate appraisal of the extent to which stressful events could be controlled. Although suicidal patients were able to generate as many adaptive strategies as control subjects for coping with their own most severe recent real-life stressor, they actually used fewer. They were also more likely to identify maladaptive behaviors as ways of coping. These findings support a transactional model of adolescent suicidal behavior, whereby inaccuracies in the appraisal aspects of problem solving (but not in the solution-generation aspects) in the face of high life stress lead to a reduction in the use of adaptive efforts to cope.


Subject(s)
Adaptation, Psychological , Problem Solving , Stress, Psychological/complications , Suicide, Attempted/psychology , Adolescent , Female , Humans , Internal-External Control , Male , Patient Admission , Personality Assessment , Suicide, Attempted/prevention & control
17.
Science ; 256(5058): 720-1, 1992 May 08.
Article in English | MEDLINE | ID: mdl-17756443
18.
Science ; 253(5017): 309-11, 1991 Jul 19.
Article in English | MEDLINE | ID: mdl-17794698

ABSTRACT

A population genetic analysis of honey bees of the Mexican neotropical Yucatan peninsula shows that the range expansion of Africanized bees there has involved extensive introgressive hybridization with European bees. Yucatan honey bee populations now include many colonies with intermediate morphologies. Genotypes of mitochondria have disassociated from historically correlated Africanized or European morphology, producing diverse phenotypic associations. This suggests that the size of resident European populations may be important in explaining previously reported asymmetrical hybridization. Evidence of natural hybridization is encouraging for the use of genetic management to mitigate the effects of Africanized bees in the United States.

20.
Urologe A ; 27(4): 218-20, 1988 Jul.
Article in German | MEDLINE | ID: mdl-2459830

ABSTRACT

Red blood cells were concentrated from the irrigation fluid used during prostatic resection in 30 patients by means of a cell saver system. The resulting units of packed red cells were analysed for quality and possible contamination. Average blood loss during the procedure was 645 ml, and an average of 580 ml of packed red cells was harvested and retransfused in 25 patients. Retransfusion was well tolerated and no adverse reactions were seen. Our positive clinical experience with the method and the ease of application suggest that it can probably be recommended as a routine procedure during transurethral resection of the prostate.


Subject(s)
Blood Component Removal/instrumentation , Blood Transfusion, Autologous/instrumentation , Erythrocyte Transfusion , Prostatectomy/methods , Prostatic Hyperplasia/surgery , Aged , Humans , Male , Postoperative Complications/etiology , Urethra/surgery
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