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1.
Biomacromolecules ; 23(1): 34-46, 2022 01 10.
Article in English | MEDLINE | ID: mdl-34793129

ABSTRACT

The black-legged tick (Ixodes scapularis) is the primary vector for bacteria that cause Lyme disease (Borrelia burgdorferi), where numerous glycosylated tick proteins are involved at the interface of vector-host-pathogen interactions. Reducing the expression of key tick proteins, such as selenoprotein K (SelK), through RNA interference is a promising approach to reduce pathogen transmission, but efficient delivery of nucleic acids to arthropods has proven challenging. While cationic glycopolymers have been used as nonviral gene delivery vehicles in mammalian cells, their use in arthropod or insect gene transfection has not been established. In this study, statistical acrylamide-based cationic glycopolymers with glucose or galactose pendant groups were synthesized by reversible addition-fragmentation chain transfer polymerization, and the effects of the saccharide pendant group and cationic monomer loading on polymer cytotoxicity, RNA complexation, and SelK gene knockdown in ISE6 cells were evaluated. All polymers exhibited low cytotoxicity, yet RNA/copolymer complex cell uptake and gene knockdown were highly dependent on the saccharide structure and the N:P (amino to phosphate groups) ratio.


Subject(s)
Borrelia burgdorferi , Ixodes , Lyme Disease , Animals , Arthropod Proteins/metabolism , Borrelia burgdorferi/metabolism , Ixodes/genetics , Ixodes/metabolism , Ixodes/microbiology , Lyme Disease/genetics , Lyme Disease/microbiology , RNA Interference
2.
FASEB J ; 35(2): e21318, 2021 02.
Article in English | MEDLINE | ID: mdl-33508158

ABSTRACT

Alzheimer's disease (AD) is a progressive neurodegenerative disorder that affects cognition and memory. Recent advances have helped identify many clinical sub-types in AD. Mounting evidence point toward structural polymorphism among fibrillar aggregates of amyloid-ß (Aß) to being responsible for the phenotypes and clinical manifestations. In the emerging paradigm of polymorphism and prion-like propagation of aggregates in AD, the role of low molecular weight soluble oligomers, which are long known to be the primary toxic agents, in effecting phenotypes remains inconspicuous. In this study, we present the characterization of three soluble oligomers of Aß42, namely 14LPOs, 16LPOs, and GM1Os with discreet biophysical and biochemical properties generated using lysophosphatidyl glycerols and GM1 gangliosides. The results indicate that the oligomers share some biophysical similarities but display distinctive differences with GM1Os. Unlike the other two, GM1Os were observed to be complexed with the lipid upon isolation. It also differs mainly in detection by conformation-sensitive dyes and conformation-specific antibodies, temperature and enzymatic stability, and in the ability to propagate morphologically-distinct fibrils. GM1Os also show distinguishable biochemical behavior with pronounced neuronal toxicity. Furthermore, all the oligomers induce cerebral amyloid angiopathy (CAA) and plaque burden in transgenic AD mice, which seems to be a consistent feature among all lipid-derived oligomers, but 16LPOs and GM1Os displayed significantly higher effect than the others. These results establish a correlation between molecular features of Aß42 oligomers and their distinguishable effects in transgenic AD mice attuned by lipid characteristics, and therefore help bridge the knowledge gap in understanding how oligomer conformers could elicit AD phenotypes.


Subject(s)
Amyloid beta-Peptides/metabolism , Amyloid/metabolism , Lipids/pharmacology , Amyloid/drug effects , Animals , Cell Line, Tumor , Cell Survival/physiology , Circular Dichroism , Dynamic Light Scattering , G(M1) Ganglioside/pharmacology , Immunohistochemistry , Magnetic Resonance Spectroscopy , Mice , Mice, Transgenic , Microscopy, Atomic Force , Phosphatidylglycerols/pharmacology , Plaque, Amyloid/metabolism , Spectrometry, Mass, Electrospray Ionization , Spectroscopy, Fourier Transform Infrared
3.
J Chem Phys ; 150(7): 075101, 2019 Feb 21.
Article in English | MEDLINE | ID: mdl-30795679

ABSTRACT

As the primary toxic species in the etiology of Alzheimer disease (AD) are low molecular weight oligomers of Aß, it is crucial to understand the structure of Aß oligomers for gaining molecular insights into AD pathology. We have earlier demonstrated that in the presence of fatty acids, Aß42 peptides assemble as 12-24mer oligomers. These Large Fatty Acid-derived Oligomers (LFAOs) exist predominantly as 12mers at low and as 24mers at high concentrations. The 12mers are more neurotoxic than the 24mers and undergo self-replication, while the latter propagate to morphologically distinct fibrils with succinct pathological consequences. In order to glean into their functional differences and similarities, we have determined their structures in greater detail by combining molecular dynamic simulations with biophysical measurements. We conjecture that the LFAO are made of Aß units in an S-shaped conformation, with the 12mers forming a double-layered hexamer ring (6 × 2) while the structure of 24mers is a double-layered dodecamer ring (12 × 2). A closer inspection of the (6 × 2) and (12 × 2) structures reveals a concentration and pH dependent molecular reorganization in the assembly of 12 to 24mers, which seems to be the underlying mechanism for the observed biophysical and cellular properties of LFAOs.


Subject(s)
Amyloid beta-Peptides/chemistry , Fatty Acids/chemistry , Peptide Fragments/chemistry , Protein Multimerization , Molecular Dynamics Simulation , Protein Structure, Quaternary
4.
Anal Chem ; 87(15): 7515-8, 2015 Aug 04.
Article in English | MEDLINE | ID: mdl-26148196

ABSTRACT

Quantitative analysis of the carbonate species within clinical and environmental samples is highly critical to the advancement of accurate environmental monitoring, disease screening, and personalized medicine. Herein we report the first example of carbonate detection using ultrasensitive ion selective electrodes (ISEs). The low detection limit (LDL) of these electrodes was at least 4 orders of magnitude lower than the best currently existing carbonate sensors. This was achieved by a simple alteration of the sensor's conditioning protocol. This resulted in the reduction of ion fluxes across the membrane interface consequently lowering the LDL to picomolar levels. The proposed ISEs exhibited near-Nernstian potentiometric responses to carbonate ions with a detection limit of 80 pmol L(-1) (5 ppt) and was utilized for direct determination of carbonate in seawater. Moreover, the new methodology has produced electrodes with excellent reproducibility, robustness, and durability. It is anticipated that this approach may form the basis for the development of highly sensitive and robust ion selective electrodes capable of in situ measurements.

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