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1.
Nat Commun ; 11(1): 5322, 2020 10 21.
Article in English | MEDLINE | ID: mdl-33087724

ABSTRACT

Forest production efficiency (FPE) metric describes how efficiently the assimilated carbon is partitioned into plants organs (biomass production, BP) or-more generally-for the production of organic matter (net primary production, NPP). We present a global analysis of the relationship of FPE to stand-age and climate, based on a large compilation of data on gross primary production and either BP or NPP. FPE is important for both forest production and atmospheric carbon dioxide uptake. We find that FPE increases with absolute latitude, precipitation and (all else equal) with temperature. Earlier findings-FPE declining with age-are also supported by this analysis. However, the temperature effect is opposite to what would be expected based on the short-term physiological response of respiration rates to temperature, implying a top-down regulation of carbon loss, perhaps reflecting the higher carbon costs of nutrient acquisition in colder climates. Current ecosystem models do not reproduce this phenomenon. They consistently predict lower FPE in warmer climates, and are therefore likely to overestimate carbon losses in a warming climate.

2.
Scand J Rheumatol ; 45(4): 255-61, 2016 Jul.
Article in English | MEDLINE | ID: mdl-26690505

ABSTRACT

OBJECTIVES: Rheumatoid arthritis (RA) patients suffer from disabling fatigue but the causes of this condition are unknown. Our aim was to assess which of the variables disease activity, disease duration, and pain is associated with fatigue. METHOD: We conducted a systematic literature search in MEDLINE and EMBASE, followed by selection of studies according to set criteria, data extraction, and statistical analyses of the relationships in RA between fatigue and the following covariates: disease duration, erythrocyte sedimentation rate (ESR), C-reactive protein (CRP), the 28-joint Disease Activity Score (DAS28), swollen to tender joint count ratio (STR), and pain. Linear regression analyses of fatigue regressed on each of the six covariates, and a multiple regression analysis where fatigue was regressed on the six covariates through a forward selection procedure was carried out with construction of correlation measures between fatigue and the covariates. RESULTS: A total of 121 studies were included in the analyses, including > 100 000 RA patients. A high level of fatigue was seen even in well-treated patients, demonstrating fatigue as a major problem in RA. Fatigue was found to be positively correlated with pain, CRP, DAS28, and ESR but not with the STR or disease duration, with pain as the overall domineering factor. CONCLUSIONS: Fatigue has a substantial influence on the lives of RA patients, independent of disease duration. Pain is the domineering factor in the experience and degree of fatigue. Disease activity is positively correlated to fatigue but does not contribute substantially when pain is considered. Optimal pain relief is therefore an important part of the treatment to improve fatigue in RA.


Subject(s)
Arthritis, Rheumatoid/physiopathology , Fatigue/physiopathology , Pain/physiopathology , Arthritis, Rheumatoid/epidemiology , Arthritis, Rheumatoid/immunology , Blood Sedimentation , C-Reactive Protein/immunology , Fatigue/epidemiology , Humans , Pain/epidemiology , Regression Analysis , Severity of Illness Index , Time Factors
3.
Int J Food Microbiol ; 196: 40-50, 2015 Mar 02.
Article in English | MEDLINE | ID: mdl-25522056

ABSTRACT

The accurate estimation of true prevalence and concentration of microorganisms in foods is an important element of quantitative microbiological risk assessment (QMRA). This estimation is often based on microbial detection and enumeration data. Among such data are artificial zero counts, that originated by chance from contaminated food products. When these products are not differentiated from uncontaminated products that originate true zero counts, the estimates of true prevalence and concentration may be inaccurate. This inaccuracy is especially relevant in situations where highly pathogenic bacteria are involved and where growth can occur along the food pathway. Our aim was to develop a method that provides accurate estimates of concentration parameters and differentiates between artificial and true zeroes, thus also accurately estimating true prevalence. We first show the disadvantages of using a limit of quantification (LOQ) threshold for the analysis of microbial enumeration data. We show that, depending on the original distribution of concentrations and the LOQ value, it may be incorrect to treat artificial zeroes as censored below a quantification threshold. Next, a method is developed that estimates the true prevalence of contamination within a food lot and the parameters characterizing the within-lot distribution of concentrations, without assuming a LOQ, and using raw plate count data as an input. Counts resulting both from contaminated and uncontaminated sample units are analysed together. This procedure allows the estimation of the proportion of artificial zeroes among the total of zero counts, and therefore the estimation of true prevalence from enumeration results. We observe that this method yields best estimates of mean, standard deviation and prevalence at low true prevalence levels and low expected standard deviation. Furthermore, we conclude that the estimation of prevalence and the estimation of the distribution of concentrations are interrelated and therefore should be estimated simultaneously. We also conclude that one of the keys to an accurate characterization of the overall microbial contamination is the correct identification and separation of true and artificial zeroes. Our method for the analysis of quantitative microbial data shows a good performance in the estimation of true prevalence and the parameters of the distribution of concentrations, which indicates that it is a useful data analysis tool in the field of QMRA.


Subject(s)
Food Microbiology/methods , Risk Assessment/standards , Bacterial Load , Models, Biological , Prevalence , Probability
4.
J Dairy Sci ; 96(12): 7558-64, 2013.
Article in English | MEDLINE | ID: mdl-24140322

ABSTRACT

Salmonella Dublin is a bacterium that causes disease and production losses in cattle herds. In Denmark, a surveillance and control program was initiated in 2002 to monitor and reduce the prevalence of Salmonella Dublin. In dairy herds, the surveillance includes herd classification based on bulk tank milk measurements of antibodies directed against Salmonella Dublin at 3-mo intervals. In this study, an "alarm herd" concept, based on the dynamic progression of these repeated measurements, was formulated such that it contains predictive power for Salmonella Dublin herd classification change from "likely free of infection" to "likely infected" in the following quarter of the year, thus warning the farmer 3 mo earlier than the present system. The alarm herd concept was defined through aberrations from a stable development over time of antibody levels. For suitable parameter choices, alarm herd status was a positive predictor for Salmonella Dublin status change in dairy herds, in that alarm herds had a higher risk of changing status in the following quarter compared with nonalarm herds. This was despite the fact that both alarm and nonalarm herds had antibody levels that did not indicate the herds being "likely infected" according to the existing classification system in the present quarter. The alarm herd concept can be used as a new early warning element in the existing surveillance program. Additionally, to improve accuracy of herd classification, the alarm herd concept could be incorporated into a model including other known risk factors for change in herd classification. Furthermore, the model could be extended to other diseases monitored in similar ways.


Subject(s)
Cattle Diseases/diagnosis , Cattle Diseases/epidemiology , Cattle Diseases/microbiology , Epidemiological Monitoring/veterinary , Salmonella Infections, Animal/diagnosis , Salmonella Infections, Animal/epidemiology , Salmonella enterica , Animals , Antibodies, Bacterial/analysis , Cattle , Denmark/epidemiology , Milk/chemistry , Prevalence
5.
J Comp Pathol ; 146(2-3): 243-52, 2012.
Article in English | MEDLINE | ID: mdl-21868026

ABSTRACT

A novel technique of endoscopical collection of small tissue samples was used to obtain sequential tissue samples from the dorsal soft palate (DSP) of individual cattle infected with foot-and-mouth disease virus (FMDV) at different phases of the infection. Levels of mRNA encoding interferon (IFN)-α and IFN-ß as well as tumour necrosis factor (TNF)-α were measured in these samples by quantitative reverse transcriptase polymerase chain reaction. Expression of IFN-ß mRNA was significantly down-regulated in the biopsy samples harvested during the acute phase of infection, while there was no statistically significant effect on the expression of IFN-α mRNA compared with baseline levels. In contrast, the mRNA encoding TNF-α was significantly up-regulated in samples collected during both acute and late (>28 days post infection) phases of infection. There were also significantly higher levels of TNF-α mRNA expressed in samples derived from animals that were identified subsequently as persistently infected FMDV-carriers. It was concluded that there was a significant difference in the host-response in the DSP of calves that were identified as persistently infected, subclinical carriers of FMDV.


Subject(s)
Cattle Diseases/metabolism , Foot-and-Mouth Disease Virus/metabolism , Foot-and-Mouth Disease/metabolism , Interferon-alpha/metabolism , Interferon-beta/metabolism , Pharynx/metabolism , Tumor Necrosis Factor-alpha/metabolism , Animals , Cattle , Cattle Diseases/genetics , Cattle Diseases/virology , Foot-and-Mouth Disease/genetics , Foot-and-Mouth Disease/virology , Foot-and-Mouth Disease Virus/genetics , Interferon-alpha/genetics , Interferon-beta/genetics , Pharynx/virology , RNA, Messenger/genetics , RNA, Messenger/metabolism , Tumor Necrosis Factor-alpha/genetics
6.
Acta Physiol (Oxf) ; 197 Suppl 673: 1-68, 2009 Oct.
Article in English | MEDLINE | ID: mdl-19744082

ABSTRACT

AIM: Muscle strength is an excellent indicator of general health when based on reliable measurements. Muscle strength data for a healthy population are rare or non-existent. The aim of the present study was to measure a set of normal values for isometric and isokinetic muscle strength for all the major joint movements of the body and, from these data, to create a basis for comparison of the muscle strength of an individual with the expected value in a normal population. METHODS: A randomly selected group, aged 20-80 years, from the Copenhagen City Heart Study were studied. The group was subgrouped according to age and gender. Isometric and isokinetic muscle strength was measured in each subject across the main joints in the body. A statistical model was developed that encompassed the three main muscle groups: upper limbs, trunk and lower limbs. RESULTS: Muscle strength in healthy men decreases in a linear fashion from the age of 25 years down to between 54% and 89% at the age of 75 years, and seems not highly dependent on any other parameter than age. For women, the muscle strength is dependent on weight and is only related to age from around 40 years of age. The decrease in muscle strength from the age around 40 to 75 years is 48-92%. For most muscle groups, men are 1.5-2 times stronger than women, with the oldest men having strength similar to that observed among the youngest women. CONCLUSION: We developed a model to compare the isometric and isokinetic muscle strength of all the major joint movements of an individual with values for a healthy man or woman at any age in the range of 20-80 years. In all age groups, women have lower muscle strength than men. Men's muscle strength declines with age, while women's muscle strength declines from the age of 41 years.


Subject(s)
Isometric Contraction/physiology , Muscle Strength/physiology , Adult , Age Factors , Aged , Biomechanical Phenomena , Cohort Studies , Cross-Sectional Studies , Female , Humans , Male , Middle Aged , Muscle, Skeletal/physiology , Physical Fitness , Reference Standards , Sex Factors , Young Adult
7.
Scand J Public Health ; 37(4): 418-26, 2009 Jun.
Article in English | MEDLINE | ID: mdl-19470691

ABSTRACT

AIMS: The aim of this study was to examine the association between different dimensions of socioeconomic position, body mass index (BMI) and obesity in the Danish population. Possible interactions between the different dimensions and gender differences were also investigated. METHODS: This was a cross-sectional survey conducted in 2000-2002 including a simple random sample from the civil registration system, comprising 1953 males and 2167 females aged 4-75 years. Information about different dimensions of socioeconomic position, height and weight was obtained by face-to-face interview. Associations between dimensions of socioeconomic position and weight status were examined by use of linear multiple regression analysis and logistic regression analysis. RESULTS: BMI and prevalence of obesity were significantly associated with education for both men and women. Odds ratios (ORs) for obesity were 2.9 (95% confidence interval (CI) 1.4-5.9) and 6.5 (95% CI 2.3-18.7) for those with basic school as compared with those with long higher education for men and women, respectively. Women outside the labour market had higher BMIs and a greater prevalence of obesity (OR 2.5 (95% CI 1.6-3.9)) after adjustment for educational level. CONCLUSIONS: Education was the dimension most consistently associated with BMI and obesity, indicating the importance of cultural capital for weight status. The gender-specific pattern showed a stronger social gradient for women, and indicated that a high relative body weight was associated with less favourable social and material conditions for women, but not for men. A public health strategy to prevent and reduce obesity should be gender-specific, focus on groups with short education, and incorporate cultural norms.


Subject(s)
Body Mass Index , Obesity/epidemiology , Socioeconomic Factors , Adolescent , Adult , Aged , Child , Child, Preschool , Cross-Sectional Studies , Denmark/epidemiology , Educational Status , Female , Humans , Male , Middle Aged , Obesity/prevention & control , Sex Factors , Young Adult
8.
Vet Rec ; 163(15): 445-7, 2008 Oct 11.
Article in English | MEDLINE | ID: mdl-18849576

ABSTRACT

The effect of a single or double dose of tulathromycin was evaluated in pigs carrying Actinobacillus pleuropneumoniae serotype 2 in their tonsils. Twenty-nine pigs from a reinfected specific pathogen-free-herd were selected from animals testing positive in an A pleuropneumoniae serotype 2-specific pcr test on tonsil scrapings and they were divided into three groups. The pigs in group 1 were treated subcutaneously with 2.5 mg/kg tulathromycin on day 0, the pigs in group 2 were treated with 2.5 mg/kg tulathromycin on days 0 and 4, and the pigs in group 3 were left untreated as controls. The pigs were tested by pcr on tonsil scrapings on days 0, 4, 11 and 33, and on day 33 all the animals were euthanased. There were no significant differences between the numbers of PCR-positive animals in the three groups on any of the sampling dates.


Subject(s)
Actinobacillus Infections/veterinary , Actinobacillus pleuropneumoniae/drug effects , Carrier State/veterinary , Disaccharides/administration & dosage , Heterocyclic Compounds/administration & dosage , Palatine Tonsil/microbiology , Swine Diseases/drug therapy , Actinobacillus Infections/drug therapy , Actinobacillus Infections/microbiology , Actinobacillus pleuropneumoniae/classification , Animals , Carrier State/drug therapy , Carrier State/microbiology , Denmark , Microbial Sensitivity Tests , Polymerase Chain Reaction , Swine , Swine Diseases/microbiology
9.
Appl Environ Microbiol ; 72(8): 5463-8, 2006 Aug.
Article in English | MEDLINE | ID: mdl-16885299

ABSTRACT

Certified Campylobacter-free poultry products have been produced in Denmark since 2002, the first example of fresh (unprocessed and nonfrozen) chickens labeled "Campylobacter free." This success occurred partly through use of a 4-hour gel-based PCR testing scheme on fecal swabs. In this study, a faster, real-time PCR approach was validated in comparative and collaborative trials, based on recommendations from the Nordic system for validation of alternative microbiological methods (NordVal). The comparative real-time PCR trial was performed in comparison to two reference culture protocols on naturally contaminated samples (99 shoe covers, 101 cloacal swabs, 102 neck skins from abattoirs, and 100 retail neck skins). Culturing included enrichment in both Bolton and Preston broths followed by isolation on Preston agar and mCCDA. In one or both culture protocols, 169 samples were identified as positive. The comparative trial resulted in relative accuracy, sensitivity, and specificity of 98%, 95%, and 97%, respectively. The collaborative trial included nine laboratories testing neck skin, cloacal swab, and shoe cover samples, spiked with low, medium, and high concentrations of Campylobacter jejuni. Valid results were obtained from six of the participating laboratories. Accuracy for high levels was 100% for neck skin and cloacal swab samples. For low levels, accuracy was 100% and 92% for neck skin and cloacal swab samples, respectively; however, detection in shoe cover samples failed. A second collaborative trial, with an optimized DNA extraction procedure, gave 100% accuracy results for all three spiking levels. Finally, on-site validation at the abattoir on a flock basis was performed on 400 samples. Real-time PCR correctly identified 10 of 20 flocks as positive; thus, the method fulfilled the NordVal validation criteria and has since been implemented at a major abattoir.


Subject(s)
Campylobacter/isolation & purification , Chickens/microbiology , Polymerase Chain Reaction/methods , Poultry Products/standards , Animals , Campylobacter/classification , Campylobacter/genetics , Campylobacter Infections/microbiology , Campylobacter Infections/veterinary , Food Contamination/prevention & control , Poultry Diseases/microbiology , Poultry Products/microbiology , Sensitivity and Specificity , Taq Polymerase
10.
Ugeskr Laeger ; 163(39): 5370-8, 2001 Sep 24.
Article in Danish | MEDLINE | ID: mdl-11590953

ABSTRACT

INTRODUCTION: Over the past decade a number of studies on the incidence and preventability of adverse events in the health care have been published in the US, Australia and the UK. So far no similar study has been performed in Denmark. In order to determine whether foreign findings could be generalised to Danish health care, a pilot study on adverse events was carried out in Danish acute care hospitals. METHOD: Chart reviews were carried out on 1.097 acute care hospital admissions, sampled from the central Danish National Patient Register. The sample was truly proportional with no over-sampling of high-risks groups. Chart reviews was done in 17 different acute care hospitals, reviewing between 20 and 204 admissions per hospital. Adverse events was identified using a three-step procedure: 1) Nurse screening by 18 criteria identifying high-risk groups. 2) Independent reviews by pairs of consultants. 3) In case of disagreement between second step consultants, two additional independent reviews was performed by new consultants (internist and surgeon) followed by conference. All chart reviews were performed independent of medical specialty. All nurses and doctors were senior and experienced clinicians. RESULTS: In 114 admissions 176 Adverse Events (AEs) were identified. The prevalence of admissions with adverse events were 9.0% of all admissions. Preventability of adverse events was found in 46 of admissions (40.4% of AEs). The adverse events caused on average a 7.0 days prolonged hospital stay. Most adverse events resulted in minor, transient disabilities. Permanent disability or death in relation to adverse event were recorded in 30 admissions. DISCUSSION: The findings from the Danish Adverse Event Study are similar to the results found in Australia, United Kingdom and the United States. It is therefore recommended that further Danish research, is directed towards high-risk groups focussing on narratives and intervention and towards research in primary health care.


Subject(s)
Malpractice/statistics & numerical data , Medical Errors/statistics & numerical data , Medication Errors/statistics & numerical data , Risk Management , Denmark/epidemiology , Humans , Iatrogenic Disease/epidemiology , Incidence , Medical Errors/prevention & control , Medical Records , Medication Errors/prevention & control , Observer Variation , Patient Admission , Quality Assurance, Health Care , Registries , Retrospective Studies
11.
Biometrics ; 55(3): 671-7, 1999 Sep.
Article in English | MEDLINE | ID: mdl-11314992

ABSTRACT

A crime has been committed, and a DNA profile of the perpetrator is obtained from the crime scene. A suspect with a matching profile is found. The problem of evaluating this DNA evidence in a forensic context, when the suspect is found through a database search, is analysed through a likelihood approach. The recommendations of the National Research Council of the U.S. are derived in this setting as the proper way of evaluating the evidence when finiteness of the population of possible perpetrators is not taken into account. When a finite population of possible perpetrators may be assumed, it is possible to take account of the sampling process that resulted in the actual database, so one can deal with the problem where a large proportion of the possible perpetrators belongs to the database in question. It is shown that the last approach does not in general result in a greater weight being assigned to the evidence, though it does when a sufficiently large amount of the possible perpetrators are in the database. The value of the likelihood ratio corresponding to the probable cause setting constitutes an upper bound for this weight, and the upper bound is only attained when all but one of the possible perpetrators are in the database.


Subject(s)
DNA Fingerprinting/statistics & numerical data , DNA/genetics , Forensic Medicine/methods , Forensic Medicine/statistics & numerical data , Biometry , Databases, Factual , Humans , Likelihood Functions
12.
Health Soc Serv J ; 91(4732): 228-9, 1981 Feb 27.
Article in English | MEDLINE | ID: mdl-10251947
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