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1.
J Med Genet ; 56(4): 209-219, 2019 04.
Article in English | MEDLINE | ID: mdl-30530636

ABSTRACT

BACKGROUND: Neurofibromatosis type 1 (NF1) predisposes to breast cancer (BC), but no genotype-phenotype correlations have been described. METHODS: Constitutional NF1 mutations in 78 patients with NF1 with BC (NF1-BC) were compared with the NF1 Leiden Open Variation Database (n=3432). RESULTS: No cases were observed with whole or partial gene deletions (HR 0.10; 95% CI 0.006 to 1.63; p=0.014, Fisher's exact test). There were no gross relationships with mutation position. Forty-five (64.3%; HR 6.4-83) of the 70 different mutations were more frequent than expected (p<0.05), while 52 (74.3%; HR 5.3-83) were significant when adjusted for multiple comparisons (adjusted p≤0.125; Benjamini-Hochberg). Higher proportions of both nonsense and missense mutations were also observed (adjusted p=0.254; Benjamini-Hochberg). Ten of the 11 missense cases with known age of BC occurred at <50 years (p=0.041). Eighteen cases had BRCA1/2 testing, revealing one BRCA2 mutation. DISCUSSION: These data strongly support the hypothesis that certain constitutional mutation types, and indeed certain specific variants in NF1 confer different risks of BC. The lack of large deletions and excess of nonsenses and missenses is consistent with gain of function mutations conferring risk of BC, and also that neurofibromin may function as a dimer. The observation that somatic NF1 amplification can occur independently of ERBB2 amplification in sporadic BC supports this concept. A prospective clinical-molecular study of NF1-BC needs to be established to confirm and build on these findings, but regardless of NF1 mutation status patients with NF1-BC warrant testing of other BC-predisposing genes.


Subject(s)
Breast Neoplasms/epidemiology , Breast Neoplasms/etiology , Genes, Neurofibromatosis 1 , Genetic Association Studies , Genetic Predisposition to Disease , Mutation , Neurofibromatosis 1/complications , Neurofibromatosis 1/genetics , Age of Onset , Alleles , Amino Acid Substitution , Female , Genetic Association Studies/methods , Genotype , Humans , Incidence , Phenotype , Risk Assessment , Risk Factors , Sequence Deletion
2.
Mol Genet Metab ; 112(2): 171-6, 2014 Jun.
Article in English | MEDLINE | ID: mdl-24793577

ABSTRACT

INTRODUCTION: In this study, patients suspected of having a clinical diagnosis of Marfan Syndrome (MFS), Loeys-Dietz Syndrome (LDS) and Thoracic Aortic Aneurysms and Dissections (TAAD) were referred for genetic testing and examined for mutations in the FBN1, TGFßR1, TGFßR2 and ACTA2 genes. METHODS: We examined 594 samples from unrelated individuals and different combinations of genes were sequenced, including one or more of the following: FBN1, TGFßR1, TGFßR2, ACTA2, and, in some cases, FBN1 was analyzed by MLPA to detect large deletions. RESULTS: A total of 112 patients had a positive result. Of those, 61 had a clinical diagnosis of MFS, eight had LDS, three had TAAD and 40 patients had clinical features with no specific diagnosis provided. A total of 44 patients had an inconclusive result; of these, 12 patients were referred with a clinical diagnosis of MFS, 4 with LDS and 9 with TAAD and 19 had no clinical diagnosis. A total of 89 mutations were novel. CONCLUSION: This study reveals the rate of detection of variants in several genes associated with MFS, LDS and TAAD. The evaluation of patients by individuals with expertise in the field may decrease the likelihood of ordering unnecessary molecular testing. Nevertheless, genetic testing supports the diagnosis of MFS, LDS and TAAD.


Subject(s)
Actins/genetics , Aortic Aneurysm/diagnosis , Genetic Variation , Marfan Syndrome/diagnosis , Microfilament Proteins/genetics , Receptors, Transforming Growth Factor beta/genetics , Adolescent , Adult , Aged , Aortic Aneurysm/genetics , Aortic Aneurysm/pathology , Child , Child, Preschool , Female , Fibrillin-1 , Fibrillins , Genetic Testing , Humans , Infant , Infant, Newborn , Male , Marfan Syndrome/genetics , Middle Aged , Mutation , Sequence Analysis, DNA , Young Adult
3.
J Genet Couns ; 21(1): 136-49, 2012 Feb.
Article in English | MEDLINE | ID: mdl-21892706

ABSTRACT

In North America, genetic counseling is an allied health profession where entry level practitioners currently must hold a master's degree earned from a graduate program accredited by the American Board of Genetic Counseling. This is one of many health care professions that could transition to an entry level clinical doctorate degree. This study explored the attitudes of genetic counseling training program directors toward such a transition. Thirty-one North American program directors were invited to complete an online survey and a follow-up telephone interview. Twenty-one program directors completed the survey and ten directors also completed a follow up phone interview. There was disagreement among the respondents on the issue of transitioning to a clinical doctorate degree (nine in favor, six against and six undecided). Respondents disagreed about whether the transition would lead to higher salaries (six yes, eight no, and seven unsure) or increased professional recognition (eight yes, eight no, and four unsure). Approximately half (n = 10) of directors were not sure if the transition to a clinical doctorate would help or hurt minority recruitment; six thought it would help and four thought it would hurt. However, the majority (n = 13) thought a clinical doctorate would help genetic counselors to obtain faculty positions. If the field transitions to a clinical doctorate, 11 of the directors thought their program would convert, seven were unsure and one thought their program would shut down. Themes identified in interview data included 1) implications for the profession 2) institution-specific considerations and 3) perception of the unknown. Opinions are quite varied at this time regarding the possible transition to the clinical doctorate among genetic counseling training program directors.


Subject(s)
Attitude of Health Personnel , Clinical Competence , Education, Medical, Graduate/organization & administration , Genetic Counseling/organization & administration , Genetics, Medical/education , Attitude to Health , Faculty, Medical , Humans , Internship and Residency/organization & administration , North America , Physician Executives , Schools, Medical/organization & administration
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