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Cancer Lett ; 470: 181-190, 2020 02 01.
Article in English | MEDLINE | ID: mdl-31765737

ABSTRACT

Most cancers are caused by somatic mutations. Some common mutations in the same cancer type can form a "signature" to specifically predict the prognosis or to distinguish it from other cancers. In this study, 710 somatic cell mutations were identified in 142 cases, including digestive, lung and urogenital cancers, and the digestive cancers were further divided into liver, stomach, intestinal, esophageal and cardia cancer. The above mutations were located in 166 genes. In addition, a group of high-frequency mutation genes with specific characteristics were screened to form predictive signatures for each cancer. Verification using TCGA suggested that the signatures could predict the stages, progression-free survival, and overall survival of digestive, intestinal, and liver cancers (P < 0.05). The validation cases further confirmed the predictive role of digestive and liver cancers signatures in diagnosis and prognosis. Overall, this study established predictive signatures for different cancer systems and their subtypes. These findings enable a better understanding in cancer genome, and contribute to the personalized diagnosis and treatment.


Subject(s)
Biomarkers, Tumor/genetics , DNA Mutational Analysis , Digestive System Neoplasms/diagnosis , Gene Expression Regulation, Neoplastic , Adult , Aged , Aged, 80 and over , Biomarkers, Tumor/analysis , Digestive System Neoplasms/genetics , Digestive System Neoplasms/mortality , Digestive System Neoplasms/therapy , Female , High-Throughput Nucleotide Sequencing , Humans , Male , Middle Aged , Mutation , Neoplasm Staging , Precision Medicine , Predictive Value of Tests , Prognosis , Progression-Free Survival , Reproducibility of Results , Young Adult
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