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1.
Neuromolecular Med ; 25(2): 145-162, 2023 06.
Article in English | MEDLINE | ID: mdl-36153432

ABSTRACT

The attribution of seizure freedom is yet to be achieved for patients suffering from refractory epilepsy, e.g. Dravet Syndrome (DS). The confined ability of mono-chemical entity-based antiseizure drugs (ASDs) to act directly at genomic level is one of the factors, combined with undetermined seizure triggers lead to recurrent seizure (RS) in DS, abominably affecting the sub-genomic architecture of neural cells. Thus, the RS and ASD appear to be responsible for the spectrum of exorbitant clinical pathology. The RS distresses the 5-HT-serotonin pathway, hypomethylates genes of CNS, and modulates the microRNA (miRNA)/long non-coding RNA (lncRNA), eventually leading to frozen molecular alterations. These changes shall be reverted by compatible epigenetic regulators (EGR) like, miRNA and lncRNA from Breast milk (BML) and Bacopa monnieri (BMI). The absence of studious seizure in SCN1A mutation-positive babies for the first 6 months raises the possibility that the consequences of mutation in SCN1A are subsidized by EGRs from BML. EGR-dependent-modifier gene effect is likely imposed by the other members of the SCN family. Therefore, we advocate that miRNA/lncRNA from BML and bacosides/miRNA from BMI buffer the effect of SCN1A mutation by sustainably maintaining modifier gene effect in the aberrant neurons. The presence of miRNA-155-5p, -30b-5p, and -30c-5p family in BML and miR857, miR168, miR156, and miR158 in BMI target at regulating SCN family and CLCN5 as visualized by Cystoscope. Thus, we envisage that the possible effects of EGR might include (a) upregulating the haploinsufficient SCN1A strand, (b) down-regulating seizure-elevated miRNA, (c) suppressing the seizure-induced methyltransferases, and (d) enhancing the GluN2A subunit of NMDA receptor to improve cognition. The potential of these EGRs from BML and BML is to further experimentally strengthen, long-haul step forward in molecular therapeutics.


Subject(s)
Drug Resistant Epilepsy , Epilepsies, Myoclonic , MicroRNAs , RNA, Long Noncoding , Infant , Female , Humans , NAV1.1 Voltage-Gated Sodium Channel/genetics , Drug Resistant Epilepsy/genetics , RNA, Long Noncoding/genetics , Epilepsies, Myoclonic/genetics , Epilepsies, Myoclonic/pathology , Seizures , Mutation , MicroRNAs/genetics , Epigenesis, Genetic
3.
Subcell Biochem ; 97: 437-453, 2021.
Article in English | MEDLINE | ID: mdl-33779927

ABSTRACT

Cardiovascular disease is the leading cause of morbidity and mortality all over the world. Emerging evidence emphasize the importance of extracellular vesicles (EVs) in the cell to cell communication in the cardiovascular system which is majorly mediated through non-coding RNA cargo. Advancement in sequencing technologies revealed a major proportion of human genome is composed of non-coding RNAs viz., miRNAs, lncRNAs, tRNAs, snoRNAs, piRNAs and rRNAs. However, our understanding of the role of ncRNAs-containing EVs in cardiovascular health and disease is still in its infancy. This book chapter provides a comprehensive update on our understanding on the role of EVs derived ncRNAs in the cardiovascular pathophysiology and their therapeutic potential.


Subject(s)
Cardiovascular System , Extracellular Vesicles , MicroRNAs , Humans , MicroRNAs/genetics , RNA, Untranslated/genetics
4.
Apoptosis ; 25(7-8): 590-604, 2020 08.
Article in English | MEDLINE | ID: mdl-32591959

ABSTRACT

Chronic alcohol consumption induces myocardial damage and a type of non-ischemic cardiomyopathy termed alcoholic cardiomyopathy, where mitochondrial ultrastructural damages and suppressed fusion activity promote cardiomyocyte apoptosis. The aim of the present study is to determine the role of mitochondrial fission proteins and/or other proteins that localise on cardiac mitochondria for apoptosis upon ethanol consumption. In vivo and in vitro chronic alcohol exposure increased mitochondrial Drp1 levels but knockdown of the same did not confer cardioprotection in H9c2 cells. These cells displayed downregulated expression of MFN2 and OPA1 for Bak-mediated cytochrome c release and apoptosis. Dysregulated PTEN/AKT cell survival signal in both ethanol treated and Drp1 knockdown cells augmented oxidative stress by promoting  mitochondrial PTEN-L and MFN1 interaction. Inhibiting this interaction with VO-OHpic, a reversible PTEN inhibitor, prevented Bak insertion into the mitochondria and release of cytochrome c to cytoplasm. Thus, our study provides evidence that Drp1-mediated mitochondrial fission is dispensable for ethanol-induced cardiotoxicity and that stress signals induce mitochondrial PTEN-L accumulation for structural and functional dyshomeostasis. Our in vivo results also demonstrates the therapeutic potential of VO-OHpic for habitual alcoholics developing myocardial dysfunction.


Subject(s)
Alcoholism/genetics , Apoptosis/genetics , Cardiomyopathy, Alcoholic/genetics , Dynamins/genetics , Ethanol/pharmacology , Mitochondria, Heart/drug effects , PTEN Phosphohydrolase/genetics , Alcoholism/metabolism , Alcoholism/pathology , Animals , Apoptosis/drug effects , Cardiomyopathy, Alcoholic/metabolism , Cardiomyopathy, Alcoholic/pathology , Cell Line , Cytochromes c/genetics , Cytochromes c/metabolism , Disease Models, Animal , Dynamins/antagonists & inhibitors , Dynamins/metabolism , Female , GTP Phosphohydrolases/genetics , GTP Phosphohydrolases/metabolism , Gene Expression Regulation , Humans , Mitochondria, Heart/metabolism , Mitochondria, Heart/pathology , Mitochondrial Proteins/genetics , Mitochondrial Proteins/metabolism , Myocardium/metabolism , Myocardium/pathology , Myocytes, Cardiac/drug effects , Myocytes, Cardiac/metabolism , Myocytes, Cardiac/pathology , Organometallic Compounds/pharmacology , PTEN Phosphohydrolase/antagonists & inhibitors , PTEN Phosphohydrolase/metabolism , Proto-Oncogene Proteins c-akt/genetics , Proto-Oncogene Proteins c-akt/metabolism , RNA, Small Interfering/genetics , RNA, Small Interfering/metabolism , Rats , Rats, Wistar , Signal Transduction , bcl-2 Homologous Antagonist-Killer Protein/genetics , bcl-2 Homologous Antagonist-Killer Protein/metabolism
5.
Cell Rep ; 23(4): 1005-1019, 2018 04 24.
Article in English | MEDLINE | ID: mdl-29694881

ABSTRACT

Mitochondria shape cytosolic calcium ([Ca2+]c) transients and utilize the mitochondrial Ca2+ ([Ca2+]m) in exchange for bioenergetics output. Conversely, dysregulated [Ca2+]c causes [Ca2+]m overload and induces permeability transition pore and cell death. Ablation of MCU-mediated Ca2+ uptake exhibited elevated [Ca2+]c and failed to prevent stress-induced cell death. The mechanisms for these effects remain elusive. Here, we report that mitochondria undergo a cytosolic Ca2+-induced shape change that is distinct from mitochondrial fission and swelling. [Ca2+]c elevation, but not MCU-mediated Ca2+ uptake, appears to be essential for the process we term mitochondrial shape transition (MiST). MiST is mediated by the mitochondrial protein Miro1 through its EF-hand domain 1 in multiple cell types. Moreover, Ca2+-dependent disruption of Miro1/KIF5B/tubulin complex is determined by Miro1 EF1 domain. Functionally, Miro1-dependent MiST is essential for autophagy/mitophagy that is attenuated in Miro1 EF1 mutants. Thus, Miro1 is a cytosolic Ca2+ sensor that decodes metazoan Ca2+ signals as MiST.


Subject(s)
Calcium/metabolism , Mitochondria/metabolism , Mitochondrial Dynamics , Receptors, G-Protein-Coupled/metabolism , Stress, Physiological , rho GTP-Binding Proteins/metabolism , Animals , HeLa Cells , Humans , Mice , Mice, Mutant Strains , Mitochondria/genetics , Receptors, G-Protein-Coupled/genetics , rho GTP-Binding Proteins/genetics
6.
J Mol Cell Cardiol ; 110: 26-34, 2017 09.
Article in English | MEDLINE | ID: mdl-28705612

ABSTRACT

Mitochondrial integrity is indispensable for cardiac health. With the advent of modern imaging technologies, mitochondrial motility and dynamics within the cell are extensively studied. Terminally differentiated and well-structured cardiomyocytes depict little mitochondrial division and fusion, questioning the contribution of mitochondrial fusion proteins (Mitofusin 1/2 and Optic Atrophy 1 protein) and fission factors (Dynamin-like protein 1 and mitochondrial fission 1 protein) in cardiomyocyte homeostasis. Emerging evidences suggest that alterations in mitochondrial morphology from globular, elongated network to punctate fragmented disconnected structures are a pathological response to ensuing cardiac stress and cardiomyocyte cell death, bringing forth the following question, "what maintains this balance between fusion and fission?" The answer hinges upon the classical "junk" DNA: microRNAs, the endogenous non-coding RNAs. Because of their essential role in numerous signaling pathways, microRNAs are considered to play major roles in the pathogenesis of various diseases. Mitochondria are not exempted from microRNA-mediated regulation. This review defines the importance of mitochondrial structural integrity and the microRNA-mitochondrial dynamics tandem, an imminent dimension of the cardiac homeostasis network. Elucidating their coordinated interaction could spur RNA-based therapeutics for resuscitating functional mitochondrial population during cardiovascular disorders.


Subject(s)
MicroRNAs/metabolism , Mitochondria, Heart/metabolism , Mitochondrial Dynamics , Myocardium/metabolism , Myocardium/pathology , Animals , Heart Diseases/metabolism , Heart Diseases/pathology , Humans , MicroRNAs/genetics , Myocytes, Cardiac/metabolism , Myocytes, Cardiac/pathology
7.
Mol Cell ; 65(6): 1014-1028.e7, 2017 Mar 16.
Article in English | MEDLINE | ID: mdl-28262504

ABSTRACT

Ca2+ dynamics and oxidative signaling are fundamental mechanisms for mitochondrial bioenergetics and cell function. The MCU complex is the major pathway by which these signals are integrated in mitochondria. Whether and how these coactive elements interact with MCU have not been established. As an approach toward understanding the regulation of MCU channel by oxidative milieu, we adapted inflammatory and hypoxia models. We identified the conserved cysteine 97 (Cys-97) to be the only reactive thiol in human MCU that undergoes S-glutathionylation. Furthermore, biochemical, structural, and superresolution imaging analysis revealed that MCU oxidation promotes MCU higher order oligomer formation. Both oxidation and mutation of MCU Cys-97 exhibited persistent MCU channel activity with higher [Ca2+]m uptake rate, elevated mROS, and enhanced [Ca2+]m overload-induced cell death. In contrast, these effects were largely independent of MCU interaction with its regulators. These findings reveal a distinct functional role for Cys-97 in ROS sensing and regulation of MCU activity.


Subject(s)
Calcium Channels/metabolism , Calcium Signaling , Calcium/metabolism , Endothelial Cells/metabolism , Ion Channel Gating , Mitochondria/metabolism , Mitochondrial Membranes/metabolism , Reactive Oxygen Species/metabolism , Animals , COS Cells , Calcium Channels/chemistry , Calcium Channels/genetics , Calcium Signaling/drug effects , Cell Death , Cell Hypoxia , Chlorocebus aethiops , Cysteine , Endothelial Cells/drug effects , Endothelial Cells/pathology , Energy Metabolism , Glutathione/metabolism , HEK293 Cells , HeLa Cells , Humans , Ion Channel Gating/drug effects , Lipopolysaccharides/pharmacology , Mice , Mice, Inbred C57BL , Mice, Knockout , Mitochondria/drug effects , Mitochondria/pathology , Mitochondrial Membranes/drug effects , Mitochondrial Membranes/pathology , Mutation , Oxidation-Reduction , Protein Multimerization , Protein Processing, Post-Translational , Protein Structure, Quaternary , Structure-Activity Relationship , Thrombin/pharmacology , Time Factors , Transfection
8.
Hum Mol Genet ; 24(13): 3880-92, 2015 Jul 01.
Article in English | MEDLINE | ID: mdl-25861811

ABSTRACT

Primary open angle glaucoma (POAG), a major cause of blindness worldwide, is a complex disease with a significant genetic contribution. We performed Exome Array (Illumina) analysis on 3504 POAG cases and 9746 controls with replication of the most significant findings in 9173 POAG cases and 26 780 controls across 18 collections of Asian, African and European descent. Apart from confirming strong evidence of association at CDKN2B-AS1 (rs2157719 [G], odds ratio [OR] = 0.71, P = 2.81 × 10(-33)), we observed one SNP showing significant association to POAG (CDC7-TGFBR3 rs1192415, ORG-allele = 1.13, Pmeta = 1.60 × 10(-8)). This particular SNP has previously been shown to be strongly associated with optic disc area and vertical cup-to-disc ratio, which are regarded as glaucoma-related quantitative traits. Our study now extends this by directly implicating it in POAG disease pathogenesis.


Subject(s)
Glaucoma, Open-Angle/genetics , Polymorphism, Single Nucleotide , Proteoglycans/genetics , Receptors, Transforming Growth Factor beta/genetics , Aged , Aged, 80 and over , Alleles , Female , Genetic Variation , Genotype , Humans , Male , Middle Aged
9.
J Cell Biol ; 190(3): 391-405, 2010 Aug 09.
Article in English | MEDLINE | ID: mdl-20679432

ABSTRACT

Oxidant stress influences many cellular processes, including cell growth, differentiation, and cell death. A well-recognized link between these processes and oxidant stress is via alterations in Ca(2+) signaling. However, precisely how oxidants influence Ca(2+) signaling remains unclear. Oxidant stress led to a phenotypic shift in Ca(2+) mobilization from an oscillatory to a sustained elevated pattern via calcium release-activated calcium (CRAC)-mediated capacitive Ca(2+) entry, and stromal interaction molecule 1 (STIM1)- and Orai1-deficient cells are resistant to oxidant stress. Functionally, oxidant-induced Ca(2+) entry alters mitochondrial Ca(2+) handling and bioenergetics and triggers cell death. STIM1 is S-glutathionylated at cysteine 56 in response to oxidant stress and evokes constitutive Ca(2+) entry independent of intracellular Ca(2+) stores. These experiments reveal that cysteine 56 is a sensor for oxidant-dependent activation of STIM1 and demonstrate a molecular link between oxidant stress and Ca(2+) signaling via the CRAC channel.


Subject(s)
Glutathione/metabolism , Homeostasis , Membrane Proteins/metabolism , Mitochondria/metabolism , Animals , COS Cells , Cells, Cultured , Chickens , Chlorocebus aethiops , Humans , Membrane Proteins/deficiency
10.
Circ Res ; 106(5): 911-9, 2010 Mar 19.
Article in English | MEDLINE | ID: mdl-20075336

ABSTRACT

RATIONALE: Peroxisome proliferator-activated receptors (PPARs) (alpha, gamma, and delta/beta) are nuclear hormone receptors and ligand-activated transcription factors that serve as key determinants of myocardial fatty acid metabolism. Long-term cardiomyocyte-restricted PPARdelta deficiency in mice leads to depressed myocardial fatty acid oxidation, bioenergetics, and premature death with lipotoxic cardiomyopathy. OBJECTIVE: To explore the essential role of PPARdelta in the adult heart. METHODS AND RESULTS: We investigated the consequences of inducible short-term PPARdelta knockout in the adult mouse heart. In addition to a substantial transcriptional downregulation of lipid metabolic proteins, short-term PPARdelta knockout in the adult mouse heart attenuated cardiac expression of both Cu/Zn superoxide dismutase and manganese superoxide dismutase, leading to increased oxidative damage to the heart. Moreover, expression of key mitochondrial biogenesis determinants such as PPARgamma coactivator-1 were substantially decreased in the short-term PPARdelta deficient heart, concomitant with a decreased mitochondrial DNA copy number. Rates of palmitate and glucose oxidation were markedly depressed in cardiomyocytes of PPARdelta knockout hearts. Consequently, PPARdelta deficiency in the adult heart led to depressed cardiac performance and cardiac hypertrophy. CONCLUSIONS: PPARdelta is an essential regulator of cardiac mitochondrial protection and biogenesis and PPARdelta activation can be a potential therapeutic target for cardiac disorders.


Subject(s)
Energy Metabolism/genetics , Lipid Metabolism/genetics , Mitochondria, Heart/metabolism , Myocytes, Cardiac/metabolism , PPAR delta/metabolism , RNA, Messenger/biosynthesis , Transcription, Genetic , Aging , Animals , Antioxidants/metabolism , Cardiomegaly/genetics , Cardiomegaly/metabolism , Cells, Cultured , DNA, Mitochondrial/metabolism , Gene Expression Regulation, Enzymologic , Glucose/metabolism , Homeostasis , Mice , Mice, Inbred C57BL , Mice, Knockout , Mitochondria, Heart/pathology , Myocytes, Cardiac/pathology , Oxidation-Reduction , Oxidative Stress/genetics , PPAR delta/deficiency , PPAR delta/genetics , Palmitic Acid/metabolism , Superoxide Dismutase/genetics , Superoxide Dismutase/metabolism , Superoxide Dismutase-1 , Ventricular Dysfunction, Left/genetics , Ventricular Dysfunction, Left/metabolism
11.
Heart Lung Circ ; 19(2): 93-5, 2010 Feb.
Article in English | MEDLINE | ID: mdl-20005173

ABSTRACT

BACKGROUND: Cardiac isoform of alpha 2 macroglobulin (CA2M), a serum protein (182000Mr) has been used as a diagnostic molecular marker for cardiac manifestations in HIV and diabetic patients. This study investigates the reliability of CA2M as an early diagnostic marker for cardiac manifestations in HIV patients and factors that could possibly influence their levels. METHODS: A total of 206 serum samples were analysed from HIV patients with cardiac diseases (68), with non-cardiac ailments (48), opportunistic infections (34) and without other co-morbidities (56). The immuno-cross-reactivity between human serum CA2M and anti-rat CA2M antibody was tested and quantified by sandwich enzyme linked immunosorbent assay (ELISA). RESULTS: The CA2M levels were high in HIV patients with cardiac diseases irrespective of the manifestations. The CA2M levels were not influenced by opportunistic infections, non-cardiac ailments and patient parameters like age, sex, duration of illness, past history of other co-morbidities. CONCLUSION: CA2M can be used as a reliable early diagnostic marker in HIV patients with cardiac manifestations. CA2M levels were not influenced by other patient parameters.


Subject(s)
AIDS-Related Opportunistic Infections/complications , HIV Infections/complications , Heart Diseases/diagnosis , alpha-Macroglobulins/analysis , Analysis of Variance , Animals , Biomarkers/blood , Enzyme-Linked Immunosorbent Assay , Heart Diseases/blood , Heart Diseases/etiology , Humans , Protein Isoforms , Rats , Statistics as Topic
12.
Mol Vis ; 9: 205-9, 2003 May 29.
Article in English | MEDLINE | ID: mdl-12789139

ABSTRACT

PURPOSE: A mutation in the PAX6 gene is thought to be the genetic cause of aniridia. Here we search for PAX6 gene mutations in Indian aniridia patients. METHODS: We amplified the coding exons of the PAX6 gene from the genomic DNA of 15 unrelated aniridia patients using polymerase chain reaction technology. We then performed single-strand conformation polymorphism analysis and heteroduplex analysis to search for sequence variants. RESULTS: Sequencing of shifted bands in two patients revealed PAX6 gene mutations. One of these was a novel mutation, 1180insA, located in exon 10 at the start of the PST domain. The other mutation, 1080C->T (R240X), located in exon 9 within the homeodomain, and is another example of the most commonly reported PAX6 mutation. CONCLUSIONS: Although PAX6 gene mutations and polymorphisms have been reported from various ethnic groups, we report for the first time the identification of PAX6 gene mutations in Indian aniridia patients.


Subject(s)
Aniridia/genetics , Eye Proteins/genetics , Homeodomain Proteins/genetics , Mutation , Transcription Factors/genetics , Adolescent , Amino Acid Sequence , Aniridia/ethnology , Cataract/genetics , DNA Mutational Analysis , Glaucoma/genetics , Heteroduplex Analysis , Humans , India/epidemiology , Male , Molecular Sequence Data , Nystagmus, Pathologic/genetics , PAX6 Transcription Factor , Paired Box Transcription Factors , Polymerase Chain Reaction , Polymorphism, Single-Stranded Conformational , Repressor Proteins , Sequence Analysis, Protein
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