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1.
Mol Cell ; 8(5): 947-58, 2001 Nov.
Article in English | MEDLINE | ID: mdl-11741531

ABSTRACT

Early endosome autoantigen localization to early endosomes is mediated by a C-terminal region, which includes a calmodulin binding motif, a Rab5 interaction site, and a FYVE domain that selectively binds phosphatidyl inositol 3-phosphate. The crystal structure of the C-terminal region bound to inositol 1,3-bisphosphate reveals an organized, quaternary assembly consisting of a parallel coiled coil and a dyad-symmetric FYVE domain homodimer. Structural and biochemical observations support a multivalent mechanism for endosomal localization in which domain organization, dimerization, and quaternary structure amplify the weak affinity and modest specificity of head group interactions with conserved residues. A unique mode of membrane engagement deduced from the quaternary structure of the C-terminal region provides insight into the structural basis of endosome tethering.


Subject(s)
Endosomes/metabolism , Inositol Phosphates/chemistry , Inositol Phosphates/metabolism , Membrane Proteins/chemistry , Membrane Proteins/metabolism , Protein Structure, Quaternary , Amino Acid Sequence , Autoantigens/chemistry , Autoantigens/genetics , Autoantigens/metabolism , Crystallography, X-Ray , Dimerization , Membrane Proteins/genetics , Models, Biological , Models, Molecular , Molecular Sequence Data , Phospholipids/chemistry , Protein Binding , Protein Structure, Tertiary , Sequence Alignment , Vesicular Transport Proteins , Zinc Fingers , rab5 GTP-Binding Proteins/metabolism
2.
Biochim Biophys Acta ; 1480(1-2): 13-22, 2000 Jul 14.
Article in English | MEDLINE | ID: mdl-11004552

ABSTRACT

The multidomain structure of soybean LOX1 was examined over the pH range 1-12. Lipoxygenase-1 activity was reversible over broad pH range of 4-10 due to the reversibility of conformational states of the molecule. Below pH 4.0, due to collapse in hydrophobic interactions, the enzyme unfolded to an irreversible conformation with the properties of molten globule state with a mid point of transition at pH 2.4. This intermediate state lost iron irreversibly. In alkaline pH at 11.5, LOX1 underwent partial unfolding with the exposure of cysteine residues with subsequent oxidation of a pair of cysteine residues in the C-terminal domain and this intermediate showed some properties of molten globule state and retained 35% of activity. Beyond pH 12.0, the enzyme was completely inactivated irreversibly due to irreversible conformational changes. The pH-dependent urea-induced unfolding of LOX1 suggested that LOX1 was more stable at pH 7.0 and least stable at pH 9.0. Furthermore, the urea-induced unfolding of LOX1 indicated that the unfolding was biphasic due to pH-dependent domain interactions and involved sequential unfolding of domains. The loss of enzyme activity at pH 4. 0 and 7.0 occurred much earlier to unfolding of the C-domain at all pHs studied. The combination of urea-induced unfolding measurements and limited proteolysis experiments suggested that at pH 4.0, the domains in LOX1 were less interactive and existed as tightly folded units. Furthermore, these results confirmed the contribution of ionic interactions in the interdomain contacts.


Subject(s)
Hydrogen-Ion Concentration , Lipoxygenase/metabolism , Anilino Naphthalenesulfonates/metabolism , Circular Dichroism , Hydrolysis , Iron/analysis , Lipoxygenase/chemistry , Pepsin A/metabolism , Protein Conformation , Protein Denaturation , Glycine max/enzymology , Spectrometry, Fluorescence , Spectrophotometry, Ultraviolet , Sulfhydryl Compounds/chemistry , Urea/chemistry
4.
J Agric Food Chem ; 47(12): 4992-7, 1999 Dec.
Article in English | MEDLINE | ID: mdl-10606563

ABSTRACT

Curcumin [1,7-bis(4-hydroxy-3-methoxyphenyl)-1,6-heptadiene-3, 5-dione], the main constituent of the rhizomes of the plant Curcume longa L. (turmeric), is a powerful antioxidant in both enzymatic and nonenzymatic systems. The interactions of curcumin with egg and soy phosphatidylcholine were followed by fluorescence spectroscopy. Curcumin had very weak fluorescence in aqueous system, which was enhanced in apolar environments. Curcumin emitted at 490 nm after being excited at 451 nm in phosphatidylcholine micelles. The equilibrium constants for the interaction of curcumin with egg and soy phosphatidylcholine were (3.26 +/- 0.2) x 10(5) and (2.64 +/- 0.2) x 10(5) M(-1), respectively. From the Scatchard plot of the fluorometric data, it was inferred that one molecule of curcumin could bind six molecules of phosphatidylcholine. The equilibrium constant for the phosphatidylcholine-curcumin interaction decreased with temperature, indicating the amphiphilic nature of curcumin. The DeltaG, DeltaH, and DeltaS values obtained for the interaction of egg phosphatidylcholine-curcumin were -7.8 +/- 0.3 kcal/mol, -9.6 +/- 0.4 kcal/mol, and -6.8 +/- 0.2 cal/mol/K, respectively. The fluorescence anisotropy measurements of curcumin with phosphatidylcholine suggested that the anisotropy of the curcumin molecule did not change in phosphatidylcholine. The interaction of divalent metal ions with phosphatidylcholine-curcumin in comparison with phosphatidylcholine-1-anilino-8-naphathalenesulfonic acid complex suggested the strong binding of curcumin to metal ions.


Subject(s)
Antioxidants/chemistry , Curcumin/chemistry , Phosphatidylcholines/chemistry , Egg Yolk , Humans , Lipid Peroxidation , Micelles , Glycine max , Spectrometry, Fluorescence
5.
Lipids ; 34(10): 1025-9, 1999 Oct.
Article in English | MEDLINE | ID: mdl-10580329

ABSTRACT

Curcumin (diferuloyl methane) has a wide range of physiological and pharmacological actions. Curcumin interaction with human serum albumin (HSA) has been followed by fluorescence quenching and circular dichroism (CD) measurements. Based on fluorescence measurements, the equilibrium constant for the interaction is 2.0+/-0.2x10(5) M(-1). Binding of curcumin to HSA induces an extrinsic CD band in the visible region. From the induced CD band measurements, the equilibrium constant has a value of 2.1+/-0.3x10(4) M(-1). Thus, HSA has two kinds of affinity sites for curcumin, one with high affinity and the other with lower affinity. Job's plot indicated a binding stoichiometry of 1:1 for the high-affinity site. The equilibrium constant was invariant with temperature in the range of 15 to 45 degrees C, suggesting the role of hydrophobic interactions in the binding of curcumin to HSA. Curcumin does not change the conformation of the HSA molecule. These measurements have implications in the understanding of the curcumin transport under physiological conditions.


Subject(s)
Curcumin/chemistry , Serum Albumin/chemistry , Biological Transport , Curcumin/metabolism , Humans , Protein Binding , Serum Albumin/metabolism , Spectrum Analysis
6.
J Biol Chem ; 274(50): 35351-8, 1999 Dec 10.
Article in English | MEDLINE | ID: mdl-10585402

ABSTRACT

Urea-induced unfolding of lipoxygenase-1 (LOX1) at pH 7.0 was followed by enzyme activity, spectroscopic measurements, and limited proteolysis experiments. Complete unfolding of LOX1 in 9 M urea in the presence of thiol reducing or thiol modifying reagents was observed. The aggregation and oxidative reactions prevented the reversible unfolding of the molecule. The loss of enzyme activity was much earlier than the structural loss of the molecule during the course of unfolding, with the midpoint concentrations being 4.5 and 7.0 M for activity and spectroscopic measurements, respectively. The equilibrium unfolding transition could be adequately fitted to a three-state, two-step model (N left arrow over right arrow I left arrow over right arrow U) and the intermediate fraction was maximally populated at 6.3 M urea. The free energy change (DeltaG(H(2)O)) for the unfolding of native (N) to intermediate (I) was 14.2 +/- 0.28 kcal/mol and for the intermediate to the unfolded state (U) was 11.9 +/- 0.12 kcal/mol. The ANS binding measurements as a function of urea concentration indicated that the maximum binding of ANS was in 6.3 M urea due to the exposure of hydrophobic groups; this intermediate showed significant amount of tertiary structure and retained nearly 60% of secondary structure. The limited proteolysis measurements showed that the initiation of unfolding was from the C-terminal domain. Thus, the stable intermediate observed could be the C-terminal domain unfolded with exposed hydrophobic domain-domain interface. Limited proteolysis experiments during refolding process suggested that the intermediate refolded prior to completely unfolded LOX1. These results confirmed the role of cysteine residues and domain-domain interactions in the reversible unfolding of LOX1. This is the first report of the reversible unfolding of a very large monomeric, multi-domain protein, which also has a prosthetic group.


Subject(s)
Cysteine , Lipoxygenase/chemistry , Lipoxygenase/metabolism , Calorimetry , Circular Dichroism , Dithionitrobenzoic Acid/pharmacology , Electrophoresis, Polyacrylamide Gel , Hydrogen-Ion Concentration , Iodoacetamide/pharmacology , Kinetics , Lipoxygenase/isolation & purification , Protein Conformation/drug effects , Protein Denaturation , Protein Folding , Glycine max/enzymology , Thermodynamics , Urea
7.
Biochemistry ; 38(42): 13920-7, 1999 Oct 19.
Article in English | MEDLINE | ID: mdl-10529238

ABSTRACT

Linoleic and arachidonic acids were inserted into phosphatidylcholine deoxycholate mixed micelles (PDM-micelles) with their tail groups buried inside and carboxylic groups exposed outside. The fatty acid hydrophobic tail had a high affinity for the hydrophobic region of phosphatidylcholine micelles. The fatty acids inserted into phosphatidylcholine micelles were better substrates for soybean lipoxygenase 1 (LOX1) with two distinct pH optima at 7.0 and 10.0. With Tween 20-solubilized linoleic acid, the enzyme had a pH optimum at 9.0, exclusively forming 13-hydroperoxides. However, with linoleic and arachidonic acids inserted into PDM-micelles, LOX1 synthesized exclusively 9- and 5-hydroperoxides, respectively. The enzyme brought about the transformation of the substrate either at pH 7.4 or at 10.0, less efficiently at pH 10.0. However, the regioselectivity of the enzyme was not altered by increasing the pH from 7.4 to 10.0. Thus, LOX1 could utilize fatty acids bound to membranes as physiological substrates. The enzyme utilized the carboxylic group of linoleic and arachidonic acids inserted into the PDM-micelles as a recognition site to convert the compounds into 9- and 5-hydroperoxides, respectively. This was confirmed by activity measurements using methyl linoleate as the substrate. Circular dichroism measurement of LOX1 with PDM-micelles suggested that while there was a small change in the tertiary structure of LOX1, the secondary structure was unaffected. Soybean LOX1, which is arachidonate 15-LOX, acted as "5-LOX", thus making it possible to change the regiospecificity of the LOX1-catalyzed reaction by altering the physical state of the substrate.


Subject(s)
Deoxycholic Acid/chemistry , Fatty Acids/chemistry , Lipoxygenase/chemistry , Lipoxygenase/metabolism , Phosphatidylcholines/chemistry , Anilino Naphthalenesulfonates/metabolism , Binding Sites , Binding, Competitive , Catalysis , Deoxycholic Acid/metabolism , Enzyme Activation , Fatty Acids/metabolism , Fluorescent Dyes/metabolism , Hydrogen-Ion Concentration , Ligands , Micelles , Microscopy, Fluorescence , Osmolar Concentration , Oxygen/metabolism , Phosphatidylcholines/metabolism , Solanum tuberosum/enzymology , Glycine max/enzymology , Substrate Specificity
8.
Lipids ; 33(12): 1223-8, 1998 Dec.
Article in English | MEDLINE | ID: mdl-9930409

ABSTRACT

Curcumin (diferuloyl methane) from rhizomes of Curcuma longa L. binds to phosphatidylcholine (PC) micelles. The binding of curcumin with PC micelles was followed by fluorescence measurements. Curcumin emits at 490 nm with an excitation wavelength of 451 nm after binding to PC-mixed micelles stabilized with deoxycholate. Curcumin in aqueous solution does not inhibit dioxygenation of fatty acids by Lipoxygenase 1 (LOX1). But, when bound to PC micelles, it inhibits the oxidation of fatty acids. The present study has shown that 8.6 microM of curcumin bound to the PC micelles is required for 50% inhibition of linoleic acid peroxidation. Lineweaver-Burk plot analysis has indicated that curcumin is a competitive inhibitor of LOX1 with Ki of 1.7 microM for linoleic and 4.3 microM for arachidonic acids, respectively. Based on spectroscopic measurements, we conclude that the inhibition of LOX1 activity by curcumin can be due to binding to active center iron and curcumin after binding to the PC micelles acts as an inhibitor of LOX1.


Subject(s)
Curcumin/pharmacology , Lipoxygenase Inhibitors/pharmacology , Lipoxygenase/drug effects , Phosphatidylcholines/chemistry , Arachidonic Acids/metabolism , Catalysis , Curcumin/chemistry , Linoleic Acid/metabolism , Lipoxygenase/metabolism , Lipoxygenase Inhibitors/chemistry , Micelles , Microscopy, Fluorescence , Oxidation-Reduction
9.
FEBS Lett ; 406(1-2): 184-8, 1997 Apr 07.
Article in English | MEDLINE | ID: mdl-9109414

ABSTRACT

Lipoxygenase-1 (LOX1) from soybeans was cleaved with chymotrypsin (Ramachandran et al., 31 (1992) 7700-7706). The domains were separated on a Sephadex G-50 column by minimising domain interactions at pH 4.0. The molecular weight and apparent homogeneity of the domains were established by SDS-PAGE. The solution conformation of the 60 kDa and 30 kDa fragments was compared with that of native LOX1. 1-Anilino-8-naphthalene sulphonate (ANS) binding measurements confirmed the exposure of large hydrophobic residues on the surface of the 60 kDa due to separation of the domains. The monomeric nature of the 60 kDa fragment was confirmed by HPLC gel filtration. The increased number of binding sites and magnitude of binding constant suggested the involvement of extensive hydrophobic interactions between the two domains. The essential cofactor iron was with the C-terminal domain. The attempts to resolve and reconstitute the catalytic activity of isolated domains were not successful.


Subject(s)
Glycine max/enzymology , Lipoxygenase/chemistry , Anilino Naphthalenesulfonates/chemistry , Chromatography, Gel , Circular Dichroism , Fluorescent Dyes/chemistry , Hydrolysis , Peptide Fragments/chemistry , Peptide Fragments/isolation & purification , Protein Conformation , Spectrophotometry, Ultraviolet
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