The Conformational Map of Volatile Anesthetics: Enflurane Revisited.

Previous ambiguities in the conformational and structural landscape of the volatile anesthetic enflurane have been solved combining microwave spectroscopy in a jet expansion and ab initio calculations. The broadband (2-18 GHz) rotational spectra identified three different rotamers, sharing a common trans ether skeleton but differing in the ±gauche/trans position of the terminal chlorine atom. For each chlorine conformation two different gauche orientations were predicted for the opposite difluoromethyl group, but only one is experimentally observable due to collisional relaxation in the jet. The experimental dataset comprised nine different isotopologues ((35) Cl, (37) Cl, (13) C) and a large number (>6500) of rotational transitions. The inertial data provided structural information using the substitution and effective procedures. The structural preferences were rationalized with additional ab initio, natural-bond-orbital and non-covalent-interaction analysis, which suggest that plausible anomeric effects at the difluoromethyl group could be overridden by other intramolecular effects. The difluoromethyl orientation thus reflects a minimization of inter-fluorine repulsions while maximizing F⋅⋅⋅H attractive interactions. A comparison with previous electron diffraction and spectroscopic data in the gas and condensed phases finally resulted in a comprehensive description of this ether, completing a rotational description of the most common multi-halogenated anesthetics.

Structural evidence of anomeric effects in the anesthetic isoflurane.

The conformational and structural properties of the inhalational anesthetic isoflurane (1-chloro-2,2,2-trifluoroethyl difluoromethyl ether) have been probed in a supersonic jet expansion using Fourier-transform microwave (FT-MW) spectroscopy. Two conformers of the isolated molecule were identified from the rotational spectrum of the parent and several (37)Cl and (13)C isotopologues detected in natural abundance. The two most stable structures of isoflurane are characterized by an anti carbon skeleton (τ(C(1)-C(2)-O-C(3)) = 137.8(11)° or 167.4(19)°), differing in the trans (AT) or gauche (AG) orientation of the difluoromethyl group. The conformational abundances in the jet were estimated from relative intensity measurements as (AT)/(AG) ≈ 3:1. The structural preferences of the molecule have been rationalized with supporting ab initio calculations and natural-bond-orbital (NBO) analysis, which suggest that the molecule is stabilized by hyperconjugative effects. The NBO analysis of donor-acceptor (LP → σ*) interactions showed that these stereoelectronic effects decrease from the AT to AG conformations, so the conformational preferences can be accounted for in terms of the generalized anomeric effect.

A ground state morphed intermolecular potential for the hydrogen bonded and van der Waals isomers in OC:HI and a prediction of an anomalous deuterium isotope effect.

An extended analysis of the noncovalent interaction OC:HI is reported using microwave and infrared supersonic jet spectroscopic techniques. All available spectroscopic data then provide the basis for generating an accurately determined vibrationally complete semiempirical intermolecular potential function using a four-dimensional potential coordinate morphing methodology. These results are consistent with the existence of four bound isomers: OC-HI, OC-IH, CO-HI, and CO-IH. Analysis also leads to unequivocal characterization of the common isotopic ground state as having the OC-HI structure and with the first excited state having the OC-IH structure with an energy of 3.4683(80) cm(-1) above the ground state. The potential is consistent with the following barriers between the pairs of isomers: 382(4) cm(-1) (OC-IH/OC-HI), 294(5) cm(-1) (CO-IH/CO-HI), 324(3) cm(-1) (OC-IH/CO-IH), and 301(2) cm(-1) (OC-HI/CO-HI) defined with respect to each lower minimum. The potential is also determined to have a linear OC-IH van der Waals global equilibrium minimum structure having R(e)=4.180(11) Å, θ(1)=0.00(1)°, and θ(2)=0.00(1)°. This is differentiated from its OC-HI ground state hydrogen bound structure having R(0)=4.895(1) Å, θ(1)=20.48(1)°, and θ(2)=155.213(1)° where the distances are defined between the centers of mass of the monomers and θ(1) and θ(2) as cos(-1)[(1/2)] for i=1 and 2. A fundamentally new molecular phenomenon - ground state isotopic isomerization is proposed based on the generated semiempirical potential. The protonated ground state hydrogen-bonded OC-HI structure is predicted to be converted on deuteration to the corresponding ground state van der Waals OC-ID isomeric structure. This results in a large anomalous isotope effect in which the R(0) center of mass distance between monomeric components changes from 4.895(1) to 4.286(1) Å. Such a proposed isotopic effect is demonstrated to be a consequence of differential zero point energy factors resulting from the shallower nature of hydrogen bonding at a local potential minimum (greater quartic character of the potential) relative to the corresponding van der Waals global minimum. Further consequences of this anomalous deuterium isotope effect are also discussed.

Interplay of phenol and isopropyl isomerism in propofol from broadband chirped-pulse microwave spectroscopy.

The conformational equilibrium of the general anesthetic propofol (2,6-diisopropylphenol) has been studied in a supersonic expansion using broadband chirped-pulse microwave spectroscopy. Three conformers originated by the combined internal rotation of the hydroxyl and the two isopropyl groups have been detected in the jet-cooled rotational spectrum. The most stable conformer exhibits tunneling splittings associated with the internal rotation of the hydroxyl group, from which we determined the torsional potential and barrier heights (905-940 cm(-1)). The carbon backbone structure was derived from the spectral assignments of all 12 (13)C monosubtituted isotopologues in natural abundance and confirmed a plane-symmetric gauche orientation of the two isopropyl groups (Gg) for this conformer. In the other two detected conformers (EG and GE) one of the isopropyl groups is eclipsed with respect to the ring plane while the other is gauche, differing in a ∼180° rotation of the hydroxyl group. Supporting ab initio calculations provided information on the potential energy surface and molecular properties of the title compound.

The conformational landscape of nicotinoids: solving the conformational disparity of anabasine.

The conformational landscape of the alkaloid anabasine (neonicotine) has been investigated by using rotational spectroscopy and ab initio calculations. The results allow a detailed comparison of the structural properties of the prototype piperidinic and pyrrolidinic nicotinoids (anabasine vs. nicotine). Anabasine adopts two most stable conformations in isolation conditions, for which we determined accurate rotational and nuclear quadrupole coupling parameters. The preferred conformations are characterized by an equatorial pyridine moiety and additional N-H equatorial stereochemistry at the piperidine ring (eq-eq; eq=equatorial). The two rings of anabasine are close to a bisecting arrangement, with the observed conformations differing by an approximately 180 degrees rotation of the pyridine subunit, denoted either syn or anti. The preference of anabasine for the eq-eq-syn conformation has been established by relative intensity measurements (syn/anti approximately 5(2)). The conformational preferences of free anabasine are directed by a weak N...H-C hydrogen bond interaction between the nitrogen lone pair at piperidine and the closest C-H bond in pyridine, with N...H distances ranging from 2.686 (syn) to 2.667 A (anti). Supporting ab initio calculations by using MP2 and the recent M05-2X density functional are provided, evaluating the predictive performance of both methods.

The conformational landscape of the volatile anesthetic sevoflurane.

Most of the volatile haloorganic compounds used as anesthetics exhibit a heavy-atom frame large enough to allow for conformational changes. Even in the absence of directed intermolecular interactions, only some or just one of the possible conformations might have an appreciable abundance. In this realm, the structure of the anesthetic haloether sevoflurane (CH(2)F-O-CH(CF(3))(2)) has been resolved using Fourier-transform microwave (FT-MW) spectroscopy in a supersonic-jet expansion. In isolated conditions sevoflurane adopts a single conformation characterized by a gauche fluoromethoxy group and a near-symmetric orientation of the isopropyl group with respect to the ether plane (cis H-C(ipr)-O-C(F)). Substitution and effective structures have been calculated from the rotational spectra of all (13)C and (18)O monosubstituted isotopic species observed in natural abundance. The electric dipole moment components were determined from additional Stark effect measurements. The experimental structures and rotational data are compared with those obtained from supporting ab initio predictions using MP2 calculations and the B3LYP hybrid functional.

Semiexperimental equilibrium structure for the C6 backbone of cis-1,3,5-hexatriene; structural evidence for greater pi-electron delocalization with increasing chain length in polyenes.

Twenty-five microwave lines were observed for cis-1,3,5-hexatriene (0.05 D dipole moment) and a smaller number for its three (13)C isotopomers in natural abundance. Ground-state rotational constants were fitted for all four species to a Watson-type rotational Hamiltonian for an asymmetric top (kappa = -0.9768). Vibration-rotation (alpha) constants were predicted with a B3LYP/cc-pVTZ model and used to adjust the ground-state rotational constants to equilibrium rotational constants. The small inertial defect for cis-hexatriene shows that the molecule is planar, despite significant H-H repulsion. The substitution method was applied to the equilibrium rotational constants to give a semiexperimental equilibrium structure for the C(6) backbone. This structure and one predicted with the B3LYP/cc-pVTZ model show structural evidence for increased pi-electron delocalization in comparison with butadiene, the first member of the polyene series.

Conformational isomerization kinetics of pent-1-en-4-yne with 3,330 cm-1 of internal energy measured by dynamic rotational spectroscopy.

We demonstrate the application of molecular rotational spectroscopy to measure the conformation isomerization rate of vibrationally excited pent-1-en-4-yne (pentenyne). The rotational spectra of single quantum states of pentenyne are acquired by using a combination of IR-Fourier transform microwave double-resonance spectroscopy and high-resolution, single-photon IR spectroscopy. The quantum states probed in these experiments have energy eigenvalues of approximately 3,330 cm(-1) and lie above the barrier to conformational isomerization. At this energy, the presence of intramolecular vibrational energy redistribution (IVR) is indicated through the extensive local perturbations found in the high-resolution rotation-vibration spectrum of the acetylenic C-H stretch normal-mode fundamental. The fact that the IVR process produces isomerization is deduced through a qualitatively different appearance of the excited-state rotational spectra compared with the pure rotational spectra of pentenyne. The rotational spectra of the vibrationally excited molecular eigenstates display coalescence between the characteristic rotational frequencies of the stable cis and skew conformations of the molecule. This coalescence is observed for quantum states prepared from laser excitation originating in the ground vibrational state of either of the two stable conformers. Experimental isomerization rates are extracted by using a three-state Bloch model of the dynamic rotational spectra that includes the effects of chemical exchange between the stable conformations. The time scale for the conformational isomerization rate of pentenyne at total energy of 3,330 cm(-1) is approximately 25 ps and is 50 times slower than the microcanonical isomerization rate predicted by the statistical Rice-Ramsperger-Kassel-Marcus theory.

Microwave-based structure and four-dimensional morphed intermolecular potential for HI-CO(2).

(Microwave spectra of the four isotopologue/isotopomers, HI-(12)C(16)O(2), HI-(12)C(18)O(2), HI-(12)C(18)O(16)O, and HI-(12)C(16)O(18)O, have been recorded using pulsed-nozzle Fourier transform microwave spectroscopy. In the last two isotopomers, the heavy oxygen atom tilted toward and away from the HI moiety, respectively. Only b-type Ka = 1 <-- 0 transitions were observed. Spectral analysis provided molecular parameters including rotational, centrifugal distortion, and quadrupole constants for each isotopomer. Then, a four-dimensional intermolecular energy surface of a HI-CO2 complex was generated, morphing the results of ab initio calculations to reproduce the experimental data. The morphed potential of HI-(12)C(16)O(2) had two equivalent global minima with a well depth of 457(14) cm(-1) characterized by a planar quasi-T-shaped structure with the hydrogen atom tilted toward the CO2 moiety, separated by a barrier of 181(17) cm(-1). Also, a secondary minimum is present with a well depth of 405(14) cm(-1) with a planar quasi-T-shaped structure with the hydrogen atom tilted away from the CO2 moiety. The ground state structure of HI-(12)C(16)O(2) was determined to have a planar quasi-T-shaped geometry with R = 3.7717(1) A, thetaOCI = 82.30(1) degrees , thetaCIH = 71.55(1) degrees . The morphed potential obtained is now available for future studies of the dynamics of photoinitiated reactions of this complex.

The microwave spectrum of a two-top peptide mimetic: the N-acetyl alanine methyl ester molecule.

The rotational spectrum of N-acetyl alanine methyl ester, a derivative of the biomimetic, N-acetyl alanine N'-methyl amide or alanine dipeptide, has been measured using a mini Fourier transform spectrometer between 9 and 25 GHz as part of a project undertaken to determine the conformational structures of various peptide mimetics from the torsion-rotation parameters of low-barrier methyl tops. Torsion-rotation splittings from two of the three methyl tops capping the acetyl end of the -NH-C(=O)- and the methoxy end of -C(=O)-O- groups account for most of the observed lines. In addition to the AA state, two E states have been assigned and include an AE state having a torsional barrier of 396.45(7) cm(-1) (methoxy rotor) and an EA state having a barrier of 64.96(4) cm(-1) (acetyl rotor). The observed torsional barriers and rotational constants of alanine dipeptide and its methyl ester are compared with predictions from Möller-Plesset second-order perturbation theory (MP2) and density functional theory (DFT) in an effort to explore systematic errors at the two levels of theory. After accounting for zero-point energy differences, the torsional barriers at the MP2/cc-pVTZ level are in excellent agreement with experiment for the acetyl and methoxy groups while DFT predictions range from 8% to 80% too high or low. DFT is found to consistently overestimate the overall molecular size while MP2 methods give structures that are undersized. Structural discrepancies of similar magnitude are evident in previous DFT results of crystalline peptides.

Dynamical structure of peptide molecules.

In view of the importance of the peptide linkage in structural biology, we have carried out intensive investigations on peptide molecules consisting of a peptide linkage with one or two substituents in the gas phase by Fourier transform microwave spectroscopy, paying special attention to the internal rotation of the substituents relative to the central linkage framework. We have found that, in sharp contrast with the stiff structure around the central C-N bond of the linkage, the internal rotations of the substituents are of low frequency and thus of large amplitude and are extremely susceptible to their local environment such as the presence of other substituents.