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1.
Data Brief ; 54: 110494, 2024 Jun.
Article in English | MEDLINE | ID: mdl-38799706

ABSTRACT

A feeding trial spanning two months was conducted to evaluate the effects of Chlamydomonas sp. on growth performance, water quality, survival, proximate composition and biochemical profile of common carp (Cyprinus carpio) where fishmeal was partially replaced using Chlamydomonas sp. in the diet. Twenty uniform-sized common carp fries were distributed into triplicate groups and placed in 40-liter rectangular glass tanks. Chlamydomonas sp. was added at different levels in the diet: 0 % (control), 5 % (C5), 10 % (C10), 15 % (C15) along with the commercial feed (CMF). After the experiment, random sampling of fish was performed to conduct all the analyses. Significant variations (p < 0.05) were found in the chemical water quality parameters. The highest survival rate was recorded from C15 (81.67 %) followed by C10 (71.67 %), CMF (63.33 %) and C5 (58.33 %) respectively compared with the control (43.2 %). There were significant differences (p < 0.05) observed among all the treatments in terms of Average Daily Gains (ADG), Specific Growth Rate (SGR) and length increments. Protein content ranged the highest and the lowest in C15 (35.6 %) and control (24.8 %) respectively. The C15 group showed the highest lipid content (15.7 %) and the control group showed the lowest lipid (8.4 %). The inclusion of Chlamydomonas sp. in the diet had a significant positive impact on the fatty acid and amino acid profile of whole common carp. Present data revealed that substituting a portion of fishmeal with Chlamydomonas sp. powder could provide higher growth performance, offering both nutritional benefits and higher survival rate in common carp (Cyprinus carpio).

2.
Cell Mol Biol (Noisy-le-grand) ; 70(1): 1-11, 2024 Jan 31.
Article in English | MEDLINE | ID: mdl-38372120

ABSTRACT

Autophagy is classified into macro-autophagy and micro-autophagy. Two major types of autophagy in the complex eukaryotic organism are microautophagy and macroautophagy. During microautophagy, cytoplasmic components that need to be degraded are taken up by lysosomes in animals and by vacuole in yeast and plants via the invagination of tonoplast. While macroautophagy is initiated after the formation of a cup-shaped membrane structure, a phagophore develops at cargo that grows in size and is sealed by double-membrane vesicles to form autophagosome; a generalized mechanism for degradation of the organelle. Autophagic removal of damaged mitochondria is a conserved cellular process to maintain a healthy mitochondrion called Mitophagy. In plants and animals, mitophagy has crucial roles in stress responses, senescence, development, and programmed cell death. Mitophagy appears in mammals, fungi, and plants but many genes that controlled mitophagy are absent from plants. Numerous studies have been conducted by using ATG mutants for the identification of functional roles of Autophagy Related Genes (ATG) required during the autophagy process at various steps like; auto phagosome formation, ATG protein recruitment, etc. The role of more than 25 ATG genes in mitophagy has been discussed in this review paper. The main parameters, reviewed and summarized in this review paper, are the name of species, common name, function, domain, deletion, induction, and localization of these autophagy-related genes in the cell. This review will facilitate the students, researchers, and academics for their further research insights.


Subject(s)
Mitophagy , Saccharomyces cerevisiae , Animals , Autophagy/genetics , Mammals/genetics , Mitophagy/genetics , Plants/genetics , Plants/metabolism , Saccharomyces cerevisiae/metabolism , Vacuoles/metabolism
3.
Heliyon ; 10(3): e25596, 2024 Feb 15.
Article in English | MEDLINE | ID: mdl-38356594

ABSTRACT

Plant growth promoting rhizobacteria (PGPR) have been intensively investigated in agricultural crops for decades. Nevertheless, little information is available on the application of Sphingomonas spp. as a PGPR particularly in vegetables, despite of potential plant growth promoting traits of this group. This study investigated the role of Sphingomonas panaciterrae (PB20) on growth and nutritional profile of spinach applied through seed priming (SP), soil drenching (SD), foliar application (FA), and bacterial culture filtrate foliar (BCF) applications. The results showed that, depending on different methods of application, PB20 significantly increased plant height (19.57-65.65 %), fresh weight (7.26-37.41 %), total chlorophyll (71.14-192.54 %), carotenoid (67.10-211.67 %) antioxidant (55.99-207.04), vitamin C (8.1-94.6 %) and protein content (6.7-21.5 %) compared to control in the edible part of spinach. Among the mineral nutrients, root nitrogen (N) showed greater response to bacterial application (18.65%-46.15 % increase over control) than shoot nitrogen (6.70%-21.52 % increased over control). Likewise, in all methods of application, phosphorus (P) content showed significant increase over control both in root (42.79-78.48 %) and in shoot (3.57-27.0 %). Seed priming and foliar application of PB20 increased the shoot calcium (Ca) content compared to control. BCF foliar application yielded maximum magnesium (Mg), iron (Fe) and zinc (Zn) in shoot. However, seed priming resulted in maximum Fe in root. Overall, seed priming outperformed in growth, vitamin C, antioxidants, N and P uptake, while BCF foliar application resulted in better uptake of several nutrients. Multivariate analysis validated the positive association of most of the growth parameters with SP while several nutrients with FA and BCF. Based on the findings it is evident that this rhizobacteria PB20 has the potentiality to be applied as a biofertilizer to produce nutrient-enriched spinach with an improved yield. Farmers can conveniently incorporate PR20 through seed priming before planting of spinach, with additional benefits through foliar spray.

4.
Plant Physiol Biochem ; 207: 108328, 2024 Feb.
Article in English | MEDLINE | ID: mdl-38183902

ABSTRACT

The implementation of salt stress mitigation strategies aided by microorganisms has the potential to improve crop growth and yield. The endophytic fungus Metarhizium anisopliae shows the ability to enhance plant growth and mitigate diverse forms of abiotic stress. We examined the functions of M. anisopliae isolate MetA1 (MA) in promoting salinity resistance by investigating several morphological, physiological, biochemical, and yield features in rice plants. In vitro evaluation demonstrated that rice seeds primed with MA enhanced the growth features of rice plants exposed to 4, 8, and 12 dS/m of salinity for 15 days in an agar medium. A pot experiment was carried out to evaluate the growth and development of MA-primed rice seeds after exposing them to similar levels of salinity. Results indicated MA priming in rice improved shoot and root biomass, photosynthetic pigment contents, leaf succulence, and leaf relative water content. It also significantly decreased Na+/K+ ratios in both shoots and roots and the levels of electrolyte leakage, malondialdehyde, and hydrogen peroxide, while significantly increasing proline content in the leaves. The antioxidant enzymes catalase, glutathione S-transferase, ascorbate peroxidase, and peroxidase, as well as the non-enzymatic antioxidants phenol and flavonoids, were significantly enhanced in MA-colonized plants when compared with MA-unprimed plants under salt stress. The MA-mediated restriction of salt accumulation and improvement in physiological and biochemical mechanisms ultimately contributed to the yield improvement in salt-exposed rice plants. Our findings suggest the potential use of the MA seed priming strategy to improve salt tolerance in rice and perhaps in other crop plants.


Subject(s)
Metarhizium , Oryza , Endophytes , Oryza/microbiology , Salt Tolerance , Antioxidants
5.
Sci Rep ; 14(1): 1843, 2024 01 22.
Article in English | MEDLINE | ID: mdl-38246969

ABSTRACT

Advanced glycation end products (AGEs) have potential implications on several diseases including skin inflammation and aging. AGEs formation can be triggered by several factors such as UVB, glyoxal and methylglyoxal etc. However, little attention has been paid to glyoxal-derived AGEs (GO-AGEs) and UVB-induced skin inflammaging, with none have investigated together. This study aimed to investigate the possible role of GO-AGEs and UVB in skin inflammaging focusing on revealing its molecular mechanisms. The effects of GO-AGEs in the presence or absence of UVB were studied by using enzyme linked immunosorbent assay, western blotting, qPCR, flow cytometry and in silico approaches. In HaCaT cells, GO-AGEs in the presence of UVB irradiation (125 mJ/cm2) dramatically enhanced the release of different pro-inflammatory cytokines (IL-1ß, IL-6, and TNF-α) with further activation of RAGE signaling pathways (NF-κB, COX 2, and IL- 1ß) and increased oxidative stress also noticed in NHEK cells. In NHDF cells, extracellular matrix disruption noted via increasing matrix metalloproteinase release and decreasing collagen type 1 and SIRT1 expression. Besides that, the docking scores obtained from the molecular docking study support the above-mentioned results. This study strongly suggests the pivotal role of GO-AGEs in skin inflammaging and illuminates novel molecular pathways for searching most effective and updated anti-aging therapy.


Subject(s)
Dermatitis , Glyoxal , Humans , Molecular Docking Simulation , Skin , Interleukin-1beta , Glycation End Products, Advanced
6.
PeerJ ; 11: e16532, 2023.
Article in English | MEDLINE | ID: mdl-38089906

ABSTRACT

Coronaviruses have caused widespread disease and death worldwide, leading to the implementation of lockdown measures and the closure of educational institutions in various countries. This research aims to investigate the impact of social isolation on the cognitive functioning of young students. The study included 84 subjects, with 48 being socially isolated and 36 non-isolated individuals. The participants' mental health was assessed using the Mini-Mental State Examination (MMSE), while cognitive functions were evaluated through attention-switching tasks (AST), pattern recognition memory (PRM), and choice reaction time (CRT) tests utilizing the Cambridge Neuropsychological Automated Battery (CANTAB) software. The socially isolated group had an average age of 21.3 ± 1.1 years, whereas the non-isolated group had an average age of 22.8 ± 2.0 years. The MMSE scores were 25.8 ± 1.6 for the socially isolated group and 28.6 ± 1.3 for the non-isolated group. In terms of cognitive functioning, there were significant differences (p = 0.000) observed in the values of AST correct latency for non-switching blocks (blocks 3 and 5) between the socially isolated group (608.1 ± 139.2) and the non-isolated group (499.5 ± 67.8). Similarly, the AST mean correct latency for switching blocks (block 7) was significantly different (p = 0.012) between the socially isolated group (784.4 ± 212.5) and the non-isolated group (671.8 ± 175.6). The socially isolated group exhibited significantly higher values in AST correct mean latency, AST congruent mean latency, AST incongruent mean latency, and AST percent mean correct trials compared to the non-isolated group. Additionally, the PRM mean percent correct significantly differed (p = 0.000) between the isolated group (81.3 ± 12.0) and the non-isolated group (91.9 ± 9.2). The isolated group also showed a higher CRT correct mean latency (482.4 ± 128.9) than the non-isolated group (451.0 ± 59.0), however the difference was not significant. In conclusion, social isolation during the COVID-19 pandemic has resulted in a decline in the cognitive functioning of young students.


Subject(s)
COVID-19 , Pandemics , Humans , Young Adult , Adult , Neuropsychological Tests , COVID-19/epidemiology , Communicable Disease Control , Cognition , Social Isolation
7.
Anticancer Agents Med Chem ; 23(20): 2171-2182, 2023.
Article in English | MEDLINE | ID: mdl-37842886

ABSTRACT

According to a 2020 WHO study, cancer is responsible for one in every six fatalities. One in four patients die due to side effects and intolerance to chemotherapy, making it a leading cause of patient death. Compared to traditional tumor therapy, emerging treatment methods, including immunotherapy, gene therapy, photothermal therapy, and photodynamic therapy, have proven to be more effective. The aim of this review is to highlight the role of gold nanoparticles in advanced cancer treatment. A systematic and extensive literature review was conducted using the Web of Science, PubMed, EMBASE, Google Scholar, NCBI, and various websites. Highly relevant literature from 141 references was chosen for inclusion in this review. Recently, the synergistic benefits of nano therapy and cancer immunotherapy have been shown, which could allow earlier diagnosis, more focused cancer treatment, and improved disease control. Compared to other nanoparticles, the physical and optical characteristics of gold nanoparticles appear to have significantly greater effects on the target. It has a crucial role in acting as a drug carrier, biomarker, anti-angiogenesis agent, diagnostic agent, radiosensitizer, cancer immunotherapy, photodynamic therapy, and photothermal therapy. Gold nanoparticle-based cancer treatments can greatly reduce current drug and chemotherapy dosages.


Subject(s)
Metal Nanoparticles , Nanoparticles , Neoplasms , Photochemotherapy , Humans , Gold , Metal Nanoparticles/therapeutic use , Photochemotherapy/methods , Neoplasms/diagnosis , Neoplasms/drug therapy , Phototherapy
8.
Article in English | MEDLINE | ID: mdl-37830140

ABSTRACT

The natural co-occurrence of aflatoxins (AFs) and ochratoxin A (OTA) in liquorice roots obtained from different herbal outlets of Karachi, Pakistan, was evaluated. A total of 60 samples were obtained during 2019‒2021 and analysed using HPLC with fluorescence detection. The method was validated according to the European Union (EU) regulation. The incidence of AFs was 52 in all tested samples (87%), with a contamination range of 1.2‒6.4 µg kg-1 and an average of 2.1 ± 0.3 µg kg-1. In all samples, the AFs contamination was below the maximum limit (ML) of 10 µg kg-1 for total AFs as set by the EU. The OTA contamination in all samples ranged 1.5‒60.3 µg kg-1, with a mean of 18.9 ± 0.8 µg kg-1. In 36 samples (60%) the OTA contamination was below the ML of 20 µg kg-1 as set by the EU. These results led to the recommendation to test liquorice root on mycotoxins, as it comes to food quality standards.

9.
Pak J Pharm Sci ; 36(5): 1561-1571, 2023 Sep.
Article in English | MEDLINE | ID: mdl-37869932

ABSTRACT

Thymus linearis and its essential oil (EO) are used to cure a range of diseases in traditional medicine. GC-MS analysis of Thymus linearis EO revealed the presence of sixty-four components. Thymol (50.62%), carvacrol (13.23 %), carvacrol acetate (7.72%), -bisabolene (5.47%) and o-cymene (5.47%) are the only five basic constituents in the oil which accounts for 82.07% of oil. When compared to other compounds, the EO and its primary components thymol and carvacrol had the largest proportion of mortality in Meloidogyne javanica. Carvacrol has also been proven to be helpful in suppressing the hatching of M. javanica eggs. This is the first time T. linearis EO and its constituents, such as borneol and caryophyllene, have been studied for nematicidal action. The antioxidant activity of EO components and active compounds was assessed using the ABTS radical scavenging method. Thymol and carvacrol were found to exhibit high antioxidant activity. The IC50 of thymol and carvacrol are found to be 38.18 g/ml and 49.65 g/ml, respectively and are comparable to the positive control trolox (47.12 g/ml). Results clearly showed high potency for EO and its constituents, thymol and carvacrol as nematicidal and antioxidant agents.


Subject(s)
Oils, Volatile , Thymus Plant , Thymol/pharmacology , Thymol/analysis , Antioxidants/pharmacology , Monoterpenes/pharmacology , Monoterpenes/chemistry , Cymenes , Oils, Volatile/chemistry , Thymus Plant/chemistry
10.
Cell Biochem Funct ; 41(8): 996-1007, 2023 Dec.
Article in English | MEDLINE | ID: mdl-37812062

ABSTRACT

Breast cancer is the most common cancer among women globally and presents a significant challenge due to its rising incidence and fatality rates. Factors such as cultural, socioeconomic, and educational barriers contribute to inadequate awareness and access to healthcare services, often leading to delayed diagnoses and poor patient outcomes. Furthermore, fostering a collaborative approach among healthcare providers, policymakers, and community leaders is crucial in addressing this critical women's health issue, reducing mortality rates, alleviating, and the overall burden of breast cancer. The main goal of this review is to explore various techniques of machine learning algorithms to examine high accuracy and early detection of breast cancer for the safe health of women.


Subject(s)
Breast Neoplasms , Female , Humans , Breast Neoplasms/diagnosis , Algorithms , Machine Learning
11.
Vet Microbiol ; 285: 109838, 2023 Oct.
Article in English | MEDLINE | ID: mdl-37690145

ABSTRACT

Mycoplasma bovis is an important respiratory pathogen of cattle. In this study, the prevalence and antimicrobial susceptibility of M. bovis were evaluated from two Cohorts of feedlot cattle spanning an 8-year period. In the first study conducted in 2008-2009, nasopharyngeal swabs from cattle sampled at feedlot entry and after 60 days on feed were collected (Cohort 1). In a second study conducted in 2015-2016, nasopharyngeal and trans-tracheal samples were collected from cattle diagnosed with bovine respiratory disease (BRD) and matching healthy controls (Cohort 2). For Cohort 1, the prevalence of M. bovis was lower in cattle at entry compared to when the same individuals were sampled ≥60 days later (P < 0.05). For Cohort 2, the prevalence of M. bovis was greater in both nasopharyngeal and tracheal samples from cattle diagnosed with BRD, compared to controls (P < 0.05). In both Cohorts, almost all isolates were resistant to tilmicosin. Compared to M. bovis from Cohort 1, isolates of Cohort 2 exhibited increased resistance to clindamycin, enrofloxacin, florfenicol, tylosin, and tulathromycin, with the latter showing resistance levels >90 %. These data suggest that antimicrobials used to prevent and treat BRD selected for resistance in M. bovis over the 8-year period. For macrolides, cross-resistance occurred and M. bovis can retain resistance even when antimicrobial selection pressure is removed. Within 9 years of commercial availability of tulathromycin, the majority of M. bovis displayed resistance. Therefore, longitudinal evaluation of resistance in respiratory pathogens is important to ensure efficacious treatment of BRD.


Subject(s)
Anti-Infective Agents , Cattle Diseases , Mycoplasma bovis , Respiratory Tract Diseases , Humans , Cattle , Animals , Prevalence , Cattle Diseases/epidemiology , Cattle Diseases/drug therapy , Anti-Bacterial Agents/pharmacology , Anti-Bacterial Agents/therapeutic use , Respiratory Tract Diseases/veterinary , Respiratory System
12.
Physiol Behav ; 269: 114289, 2023 10 01.
Article in English | MEDLINE | ID: mdl-37422081

ABSTRACT

Adolescence is a period of development in which shifts in responses to glucocorticoids is well-documented. Obesity and metabolic syndrome are substantial health issues whose rates continue to rise in both adult and adolescent populations. Though many interacting factors contribute to these dysfunctions, how these shifts in glucocorticoid responses may be related remain unknown. Using a model of oral corticosterone (CORT) exposure in male and female mice, we demonstrate differential responses during adolescence (30-58 days of age) or adulthood (70-98 day of age) in endpoints relevant to metabolic function. Our data indicate that CORT resulted in significant weight gain in adult- and adolescent-exposed females and adult-exposed males, but not adolescent-exposed males. Despite this difference, all animals treated with high levels of CORT showed significant increases in white adipose tissue, indicating a dissociation between weight gain and adiposity in adolescent-treated males. Similarly, all experimental groups showed significant increases in plasma insulin, leptin, and triglyceride levels, further suggesting potential disconnects between overt weight gain, and underlying metabolic dysregulation. Finally, we found age- and dose-dependent changes in the expression of hepatic genes important in glucocorticoid receptor and lipid regulation, which showed different patterns in males and females. Thus, altered transcriptional pathways in the liver might be contributing differentially to the similar metabolic phenotype observed among these experimental groups. We also show that despite little CORT-induced changes in the hypothalamic levels of orexin-A and NPY, we found that food and fluid intake were elevated in adolescent-treated males and females. These data indicate chronic exposure to elevated glucocorticoid levels results in metabolic dysfunction in both males and females, which can be further modulated by developmental stage.


Subject(s)
Corticosterone , Glucocorticoids , Mice , Male , Female , Animals , Glucocorticoids/metabolism , Obesity/metabolism , Weight Gain , Adiposity
13.
Asian Pac J Cancer Prev ; 24(7): 2361-2368, 2023 Jul 01.
Article in English | MEDLINE | ID: mdl-37505767

ABSTRACT

BACKGROUND: E-cadherin (CDH1), a tumor suppressor gene, encodes a transmembrane glycoprotein that helps in maintaining squamous epithelium integrity of the cervix. We aimed to investigate the association between -160C/A genetic polymorphism in CDH1 and the risk of cervical cancer in Bangladeshi females. METHOD: The present case-control study included 117 cervical cancer cases and 147 age-matched controls. The genomic DNA was extracted from peripheral blood and genotyped by using PCR-RFLP analysis. RESULTS: Genotyping results demonstrated that the occurrences of normal homozygous (-160C/C), heterozygous (-160C/A) and variant homozygous (-160A/A) genotypes were 64.10, 27.35 and 8.55% in cases, and 77.55, 19.73 and 2.72% in controls, respectively. Compared to normal C/C genotype, variant A/A and combined (C/A+A/A) or 'any A' genotypes exhibited 3.80-fold (95% CI=1.150-12.561, P=0.029) and 1.93-fold (95% CI=1.126-3.323, P=0.017) increased risk of cervical cancer development. The -160C allele was found to be positively linked to cervical cancer incidence and raised the risk by 1.81-fold (OR= 1.814, 95% CI=1.152-2.857, p=0.01). Moreover, women carrying -160A/A variant homozygosity along with an early marital history (<18 years) were more susceptible to cervical cancer development (χ2 =6.605, p=0.037). CONCLUSION: The study suggests that the (A/A) and combined (C/A +A/A) genotypes are associated with greater risk of cervical cancer in Bangladeshi women.


Subject(s)
Antigens, CD , Cadherins , Genetic Predisposition to Disease , Uterine Cervical Neoplasms , Female , Humans , Antigens, CD/genetics , Cadherins/genetics , Case-Control Studies , Cervix Uteri , Genotype , Polymorphism, Single Nucleotide , Uterine Cervical Neoplasms/epidemiology , Uterine Cervical Neoplasms/genetics
14.
Circ Cardiovasc Imaging ; 16(4): e014963, 2023 04.
Article in English | MEDLINE | ID: mdl-37071717

ABSTRACT

BACKGROUND: The relation between ventricular arrhythmia and fibrosis in mitral valve prolapse (MVP) is reported, but underlying valve-induced mechanisms remain unknown. We evaluated the association between abnormal MVP-related mechanics and myocardial fibrosis, and their association with arrhythmia. METHODS: We studied 113 patients with MVP with both echocardiogram and gadolinium cardiac magnetic resonance imaging for myocardial fibrosis. Two-dimensional and speckle-tracking echocardiography evaluated mitral regurgitation, superior leaflet and papillary muscle displacement with associated exaggerated basal myocardial systolic curling, and myocardial longitudinal strain. Follow-up assessed arrhythmic events (nonsustained or sustained ventricular tachycardia or ventricular fibrillation). RESULTS: Myocardial fibrosis was observed in 43 patients with MVP, predominantly in the basal-midventricular inferior-lateral wall and papillary muscles. Patients with MVP with fibrosis had greater mitral regurgitation, prolapse, and superior papillary muscle displacement with basal curling and more impaired inferior-posterior basal strain than those without fibrosis (P<0.001). An abnormal strain pattern with distinct peaks pre-end-systole and post-end-systole in inferior-lateral wall was frequent in patients with fibrosis (81 versus 26%, P<0.001) but absent in patients without MVP with basal inferior-lateral wall fibrosis (n=20). During median follow-up of 1008 days, 36 of 87 patients with MVP with >6-month follow-up developed ventricular arrhythmias associated (univariable) with fibrosis, greater prolapse, mitral annular disjunction, and double-peak strain. In multivariable analysis, double-peak strain showed incremental risk of arrhythmia over fibrosis. CONCLUSIONS: Basal inferior-posterior myocardial fibrosis in MVP is associated with abnormal MVP-related myocardial mechanics, which are potentially associated with ventricular arrhythmia. These associations suggest pathophysiological links between MVP-related mechanical abnormalities and myocardial fibrosis, which also may relate to ventricular arrhythmia and offer potential imaging markers of increased arrhythmic risk.


Subject(s)
Mitral Valve Insufficiency , Mitral Valve Prolapse , Humans , Mitral Valve Prolapse/complications , Mitral Valve Prolapse/diagnostic imaging , Mitral Valve Insufficiency/etiology , Mitral Valve Insufficiency/complications , Arrhythmias, Cardiac/etiology , Arrhythmias, Cardiac/complications , Papillary Muscles/diagnostic imaging , Fibrosis , Prolapse
15.
Cancer Sci ; 114(6): 2335-2344, 2023 Jun.
Article in English | MEDLINE | ID: mdl-36843384

ABSTRACT

Recent studies reported the presence of oncogenic mutations in normal endometrial glands, but the biological significance remains unclear. The present study investigated the status of KRAS/PIK3CA driver mutations in normal endometrial glands as well as spheroids derived from single glands. The normal endometria of surgically removed uteri (n = 3) were divided into nine regions, and 40 endometrial single glands were isolated from each region. The DNAs of 10 glands in each region were extracted and subjected to Sanger sequencing for KRAS or PIK3CA driver mutations, while the remaining 30 glands were conferred to a long-term spheroid culture, followed by Sanger sequencing. Immunohistochemical analyses of stem cell (Axin2, ALDH1A1, SOX9) markers were undertaken for spheroids. Sanger sequencing successfully detected oncogenic mutations of KRAS or PIK3CA in a single gland. Twenty-five of the 270 glands (9.3%) had mutations in either KRAS or PIK3CA, and the mutation frequency in each endometrial region varied from 0% to 50%. The droplet digital PCR showed high mutation allele frequency (MAF) of PIK3CA mutation, suggestive of clonal expansion of mutated cells within a gland. Over 60% of the collected spheroids had PIK3CA mutations, but no KRAS mutations were detected. Immunohistochemically, spheroids were mainly composed of cells with stem cell marker expressions. High MAF of PIK3CA mutation in a single gland as well as frequent PIK3CA mutation in stem cell-rich spheroids that originated from a single gland suggest the role of PIK3CA mutation in stem cell propagation. This information could improve our understanding of endometrial physiology as well as stem cell-oriented endometrial regeneration and carcinogenesis.


Subject(s)
Endometrial Neoplasms , Humans , Female , Endometrial Neoplasms/genetics , Endometrial Neoplasms/metabolism , Endometrium , Mutation , Class I Phosphatidylinositol 3-Kinases/genetics , Class I Phosphatidylinositol 3-Kinases/metabolism , Stem Cells , Proto-Oncogene Proteins p21(ras)/genetics , Proto-Oncogene Proteins p21(ras)/metabolism
16.
J Biomol Struct Dyn ; 41(23): 13724-13751, 2023.
Article in English | MEDLINE | ID: mdl-36826451

ABSTRACT

We have synthesized the pyrazole-bearing Schiff base derivatives (5a-5e) and (6a-6h) then the structural confirmation was supported by various spectral analyses. The antibacterial activity of all analogs was screened against bacterial strains Staphylococcus aureus, Bacillus subtilis, Enterococcus faecalis, Escherichia coli, Klebsiella pneumonieae and Pseudomonas aeruginosa. In comparison to the reference drug ciprofloxacin, the lead analogs 5c and 6c showed potent activity, with MIC values of 64 µg/mL against E. coli and B. subtilis. Compound 5c showed a moderate effect with a MIC value of 128 µg/mL against B. subtilis, P. aeruginosa and K. pneumonieae, while compound 6c was against E. coli and P. aeruginosa. Furthermore, the compounds 5c and 6c displayed groove binding mode towards CT-DNA by absorption, emission, competitive fluorescence studies using EtBr, CD and time-resolved fluorescence studies. Thermodynamic parameters of analogs 5c and 6c with CT-DNA were also calculated at 298, 303 and 308K temperatures by UV-visible spectroscopy. The molecular docking studies give the docking score for all compounds with PDB codes: 1BNA and 2XCT. The MD simulation study of analogs 5c and 6c was also carried out. The pharmacokinetic and ADME properties were calculated for all of the synthesized analogs (5a-5e) and (6a-6h).Communicated by Ramaswamy H. Sarma.


Subject(s)
Escherichia coli , Molecular Dynamics Simulation , Molecular Structure , Structure-Activity Relationship , Molecular Docking Simulation , Schiff Bases/chemistry , Anti-Bacterial Agents/chemistry , Pyrazoles/pharmacology , Microbial Sensitivity Tests
17.
J Fluoresc ; 33(2): 751-772, 2023 Mar.
Article in English | MEDLINE | ID: mdl-36515760

ABSTRACT

Compound, (E)-5-(4-((thiophen-2-ylmethylene)amino)phenyl)-1,3,4-oxadiazole-2-thiol (3) was synthesized via condensation reaction of 5-(4-aminophenyl)-1,3,4-oxadiazole-2-thiol with thiophene-2-carbaldehyde in ethanol. For the synthesis and structural confirmation the FT-IR, 1H, 13C-NMR, UV-visible spectroscopy, and mass spectrometry were carried out. The long-term stability of the probe (3) was validated by the experimental as well as theoretical studies. The sensing behaviour of the compound 3 was monitored with various metal ions (Ca2+, Cr3+, Fe3+, Co2+, Mg2+, Na+, Ni2+, K+) using UV- Vis. and fluorescence spectroscopy techniques by various methods (effect of pH and density functional theory) which showing the most potent sensing behaviour with iron. Job's plot analysis confirmed the binding stoichiometry ratio 1:1 of Fe3+ ion and compound 3. The limit of detection (LOD), the limit of quantification (LOQ), and association constant (Ka) were calculated as 0.113 µM, 0.375 µM, and 5.226 × 105 respectively. The sensing behavior was further confirmed through spectroscopic techniques (FT-IR and 1H-NMR) and DFT calculations. The intercalative mode of binding of oxadiazole derivative 3 with Ct-DNA was supported through UV-Vis spectroscopy, fluorescence spectroscopy, viscosity, cyclic voltammetry, and circular dichroism measurements. The binding constant, Gibb's free energy, and stern-volmer constant were find out as 1.24 × 105, -29.057 kJ/mol, and 1.82 × 105 respectively. The cleavage activity of pBR322 plasmid DNA was also observed at 3 × 10-5 M concentration of compound 3. The computational binding score through molecular docking study was obtained as -7.4 kcal/mol. Additionally, the antifungal activity for compound 3 was also screened using broth dilution and disc diffusion method against C. albicans strain. The synthesized compound 3 showed good potential scavenging antioxidant activity against DPPH and H2O2 free radicals.


Subject(s)
Fluorescent Dyes , Schiff Bases , Schiff Bases/chemistry , Spectroscopy, Fourier Transform Infrared , Molecular Docking Simulation , Ions , Fluorescent Dyes/chemistry , DNA/chemistry
18.
Data Brief ; 46: 108820, 2023 Feb.
Article in English | MEDLINE | ID: mdl-36582982

ABSTRACT

This experiment was designed to collect the data on antioxidants content of guppy fed with Nannochloropsis sp. inclusion diets through partial replacement of fishmeal in feed and the effect of microalgal diet on water quality parameter of the culture system. Triplicate groups of fifteen uniform sized guppy fries were kept in each rectangular glass tank (20 L) maintaining the male and female ratio to 1:2. Different experimental diets containing Nannochloropsis sp. (0%-control; 5%-N5, 10%-N10 and 15%-N15) and commercial feed (CMF) were fed to the fishes, two times a day at 5% of their body weight for 100 consecutive days. Water quality parameters were analyzed and recorded throughout the trial period. Both physical and chemical parameters of the culture tanks were measured during the trial period. At the end of experiment, random sampling was done for growth parameter assessment and further laboratory analysis. Oxidative stress (hydrogen peroxide and lipid peroxidation) was analyzed with the carcass sample. In this study, antioxidants content of guppy showed a significant difference among the treatment. Also, improved water quality parameters were found in the treatment tanks where guppy were fed with microalgae formulated feeds. In conclusion, results from this study indicate that selected marine microalga can increase the antioxidant properties of fish that would help in production of more hardy culture species for commercial aqua farming as well as help to maintain water quality parameters of the culture system which is now become a great problem.

19.
Trauma Violence Abuse ; 24(5): 3187-3204, 2023 12.
Article in English | MEDLINE | ID: mdl-36250293

ABSTRACT

There has been little research on domestic violence (DV) within ethnic minority communities in high-income countries. This study reports on the findings of a meta-ethnography that examined the barriers and facilitators of help-seeking behaviors in South Asian women living in high-income countries who have experienced DV to inform practice, understand the limits of the evidence, and identify research gaps. Qualitative studies were identified which were available in English by electronic databases. After an initial search, 2,465 articles were reviewed by title and abstract and 135 articles were reviewed for full text. Thirty-five papers were included for this review and were synthesized using meta-ethnography. Key findings included barriers and facilitators of help-seeking behaviors: (1) Socio-cultural norms to prohibit help-seeking behaviors, (2) Fear of negative consequences, (3) Negative aspects of immigration status, (4) Insufficient support from statutory, and voluntary agencies, (5) Safety strategies and facilitators for surviving. Although this review investigated the perceptions of two different populations (survivors and service providers) both groups had similar views about the barriers and facilitators of help-seeking behaviors. It is crucial for the government and non-government organizations to understand the barriers for women who are DV survivors to seek help from their organizations and also from South Asian ethnicities. The awareness and understanding of these barriers and facilitators may help support the development of interventions to encourage effective help-seeking amongst South Asian women affected by DV. Suggestions for research, practice, and policies are discussed.


Subject(s)
Domestic Violence , Help-Seeking Behavior , Humans , Female , Developed Countries , Ethnicity , Minority Groups , Survivors , Perception
20.
Hemoglobin ; 46(1): 7-9, 2022 Jan.
Article in English | MEDLINE | ID: mdl-35950585

ABSTRACT

Bangladesh is a country with a population of 160 million with a gross national income per capita of US$1580.00. The major health problems in Bangladesh include acute respiratory infection, pneumonia, dengue fever, malaria and water-borne diseases. The health care system in Bangladesh is divided into primary secondary and tertiary levels, with each level having their own breakdown of available hospital beds and other treatment facilities. Thalassemia is a major health problem in Bangladesh. There are two types of thalassemia in Bangladesh: ß-thalassemia (ß-thal) and Hb E (HBB: c.79G>A)/ß-thal, with the prevalence rate of ß-thal trait being 4.1% and Hb E trait 6.1%. This study discusses spectrum types of thalassemia and hemoglobinopathies in Bangladesh and the types of carrier detection. The distribution of common mutations of thalassemia are also discussed and the distribution frequencies of genotypes and alleles of ß-thal and Hb E patients are also compared. Additionally, we also conducted a study of the spectrum of thalassemia using high performance liquid chromatography (HPLC) of the tribal populations and analyzed the findings in our discussion. The results of these studies show that the phenotypic and genotypic presentation in Bangladesh is highly diverse. To properly understand this, we have to conduct an epidemiological survey of the population. Furthermore, there also has to be improvement on the awareness of thalassemia among the population to properly equip themselves to survive this disease.


Subject(s)
Hemoglobinopathies , alpha-Thalassemia , beta-Thalassemia , Asia , Bangladesh/epidemiology , Hemoglobinopathies/diagnosis , Hemoglobinopathies/epidemiology , Hemoglobinopathies/genetics , Humans , Mutation , alpha-Thalassemia/genetics , beta-Thalassemia/diagnosis , beta-Thalassemia/epidemiology , beta-Thalassemia/genetics
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