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1.
Cell Rep ; 43(6): 114349, 2024 Jun 25.
Article in English | MEDLINE | ID: mdl-38870009

ABSTRACT

Heat shock transcription factors (HSFs) play a crucial role in heat stress tolerance in vegetative tissues. However, their involvement in reproductive tissues and their post-translational modifications are not well understood. In this study, we identify the E3 ligase XB3 ORTHOLOG 1 IN ARABIDOPSIS THALIANA (XBAT31) as a key player in the ubiquitination and degradation of HSFB2a/B2b. Our results show that the xbat31 mutant exhibits a higher percentage of unfertile siliques and decreased expression of HSPs in flowers under heat stress conditions compared to the wild type. Conversely, the hsfb2a hsfb2b double mutant displays improved reproductive thermotolerance. We find that XBAT31 interacts with HSFB2a/B2b and mediates their ubiquitination. Furthermore, HSFB2a/B2b ubiquitination is reduced in the xbat31-1 mutant, resulting in higher accumulation of HSFB2a/B2b in flowers under heat stress conditions. Overexpression of HSFB2a or HSFB2b leads to an increase in unfertile siliques under heat stress conditions. Thus, our results dissect the important role of the XBAT31-HSFB2a/B2b module in conferring reproductive thermotolerance in plants.


Subject(s)
Arabidopsis Proteins , Arabidopsis , Gene Expression Regulation, Plant , Heat-Shock Response , Thermotolerance , Ubiquitin-Protein Ligases , Ubiquitination , Arabidopsis/genetics , Arabidopsis/metabolism , Arabidopsis/physiology , Arabidopsis Proteins/metabolism , Arabidopsis Proteins/genetics , Flowers/metabolism , Flowers/genetics , Flowers/physiology , Heat Shock Transcription Factors/metabolism , Heat Shock Transcription Factors/genetics , Mutation/genetics , Protein Binding , Reproduction/genetics , Thermotolerance/genetics , Ubiquitin-Protein Ligases/metabolism , Ubiquitin-Protein Ligases/genetics
2.
ISA Trans ; 148: 1-11, 2024 May.
Article in English | MEDLINE | ID: mdl-38429141

ABSTRACT

In this paper, the robust adaptive optimal tracking control problem is addressed for the disturbed unmanned helicopter based on the time-varying gain extended state observer (TVGESO) and adaptive dynamic programming (ADP) methods. Firstly, a novel TVGESO is developed to tackle the unknown disturbance, which can overcome the drawback of initial peaking phenomenon in the traditional linear ESO method. Meanwhile, compared with the nonlinear ESO, the proposed TVGESO possesses easier and rigorous stability analysis process. Subsequently, the optimal tracking control issue for the original unmanned helicopter system is transformed into an optimization stabilization problem. By means of the ADP and neural network techniques, the feedforward controller and optimal feedback controller are skillfully designed. Compared with the conventional backstepping approach, the designed anti-disturbance optimal controller can make the unmanned helicopter accomplish the tracking task with less energy. Finally, simulation comparisons demonstrate the validity of the developed control scheme.

3.
BMC Plant Biol ; 23(1): 185, 2023 Apr 06.
Article in English | MEDLINE | ID: mdl-37024791

ABSTRACT

BACKGROUND: 5-Aminolevulinic acid (ALA) is a natural and environmentally benign multifunctional plant growth regulator involved in the regulation of plant tolerance to various environmental stresses. This research aimed to explore the molecular mechanisms of salt tolerance in Populus wutunensis induced by exogenous ALA using physiological and transcriptomic analyses. RESULTS: Physiological results showed that 50 mg·L- 1 ALA-treatment significantly reduced the malondialdehyde (MDA) content and the relative electrical conductivity (REC) and enhanced antioxidant activities of enzymes such as SOD, POD and CAT in salt-stressed P. wutunensis seedlings. Transcriptome analysis identified ALA-induced differentially expressed genes (DEGs) associating with increased salt-tolerance in P. wutunensis. GO and KEGG enrichment analyses showed that ALA activated the jasmonic acid signaling and significantly enhanced the protein processing in endoplasmic reticulum and the flavonoid biosynthesis pathways. Results of the hormone-quantification by LC-MS/MS-based assays showed that ALA could increase the accumulation of methyl jasmonate (MeJA) in salt-stressed P. wutunensis. Induced contents of soluble proteins and flavonoids by exogenous ALA in salt-treated seedlings were also correlated with the MeJA content. CONCLUSION: 5-aminolevulinic acid improved the protein-folding efficiency in the endoplasmic reticulum and the flavonoid-accumulation through the MeJA-activated jasmonic acid signaling, thereby increased salt-tolerance in P. wutunensis.


Subject(s)
Populus , Salt Tolerance , Salt Tolerance/genetics , Aminolevulinic Acid/pharmacology , Populus/genetics , Populus/metabolism , Chromatography, Liquid , Tandem Mass Spectrometry , Seedlings/metabolism , Flavonoids/metabolism , Gene Expression Regulation, Plant
4.
ISA Trans ; 136: 715-726, 2023 May.
Article in English | MEDLINE | ID: mdl-36503616

ABSTRACT

Generation of multi-quadrotor trajectories in real-time in complex three-dimensional environments remains a grand challenge. Trajectory planning becomes computationally prohibitive as the number of quadrotors and obstacles increases. This paper proposes the distributed receding architecture-based hierarchical trajectory planning method (drHTP) to tackle this issue. The distributed receding architecture is established to formulate and solve a series of single-quadrotor short-horizon planning problems for reducing the computation complexity. In distributed planning, the time-heuristic priority mechanism is devised to assign a reasonable planning sequence to enhance the convergence performance. The hierarchical planning, including front-end initial trajectory generation and back-end trajectory optimization, is introduced for the single-quadrotor in each short horizon to further reduce the computation time. The sparse A* search algorithm is modified to only consider adjacent obstacles for obtaining the initial trajectory rapidly. The convergence of drHTP is analyzed theoretically. Numerical simulations with moving and dense obstacle scenarios are carried out to verify the effectiveness of drHTP. The comparative simulation results demonstrate that drHTP outperforms the state-of-the-art distributed sequential convex programming and distributed model predictive control methods in terms of computational efficiency. drHTP is also validated by the physical experiment in an indoor testbed.

5.
ISA Trans ; 128(Pt B): 664-676, 2022 Sep.
Article in English | MEDLINE | ID: mdl-34961607

ABSTRACT

This paper presents an trust-region filtered sequential convex programming (TRF-SCP) to reduce computational burdens of multi-UAV trajectory planning. In TRF-SCP, the trust-region based filter is proposed to remove the inactive collision-avoidance constraints of the convex programming subproblems for decreasing the complexity. The inactive constraints are detected based on the intersection relations between trust regions and collision-avoidance constraints. The trust-region based filter for different types of obstacles are tailored to address complex scenarios. An adaptive trust-region updating mechanism is also developed to mitigate infeasible iteration in TRF-SCP. The sizes of the trust regions are automatically adjusted according to the constraint violation of the optimized trajectory during the SCP iterations. TRF-SCP is then tested on several numerical multi-UAV formation scenarios involving cylindrical, spherical, conical, and polygon obstacles, respectively. Comparative studies demonstrate that TRF-SCP eliminates a large number of collision-avoidance constraints in the entire iterative process and outperforms SCP and Guaranteed Sequential Trajectory Optimization in terms of computational efficiency. The indoor flight experiments are presented to further evaluate the practicability of TRF-SCP.

6.
Food Chem ; 374: 131610, 2022 Apr 16.
Article in English | MEDLINE | ID: mdl-34823938

ABSTRACT

In this work, a robust method for the separation of gardenia yellow and geniposide from gardenia fruit was developed based on a molecularly imprinted solid phase extraction (MISPE) procedure. First, hydrophilic molecularly imprinted microspheres (HMIMs) were prepared using gardenia yellow as the template via reversible addition fragmentation chain transfer (RAFT) precipitation polymerization. The resultant HMIMs demonstrated the multiresponsiveness to pH, temperature, and magnetism, achieving controllable uptake and release of gardenia yellow and easy recovery by external magnets. Meanwhile, the HMIMs possessed high adsorption capacity, fast binding kinetics, specific recognition, and reusability. Finally, a MISPE approach using HMIMs as adsorbent was developed for extraction of gardenia yellow and purification of geniposide after optimization of the adsorption and elution conditions. Thus, efficient separation of gardenia yellow and geniposide with relative purities of 99.77 ± 0.05% (94.04 ± 0.10% recovered) and 94.50 ± 0.62% (95.40 ± 0.86% recovered), respectively, was achieved.


Subject(s)
Gardenia , Fruit , Iridoids , Microspheres , Plant Extracts
7.
Front Immunol ; 12: 730483, 2021.
Article in English | MEDLINE | ID: mdl-34512666

ABSTRACT

The antiviral innate immunity is the first line of host defense against viral infection. Mitochondrial antiviral signaling protein (MAVS, also named Cardif/IPS-1/VISA) is a critical protein in RNA virus-induced antiviral signaling pathways. Our previous research suggested that E3 ubiquitin-protein ligases RING-finger protein (RNF90) negatively regulate cellular antiviral responses by targeting STING for degradation, though its role in RNA virus infection remains unknown. This study demonstrated that RNF90 negatively regulated RNA virus-triggered antiviral innate immune responses in RNF90-silenced PMA-THP1 cells, RNF90-deficient cells (including HaCaTs, MEFs, and BMDMs), and RNF90-deficient mice. However, RNF90 regulated RNA virus-triggered antiviral innate immune responses independent of STING. RNF90 promoted K48-linked ubiquitination of MAVS and its proteasome-dependent degradation, leading to the inhibition of innate immune responses. Altogether, our findings suggested a novel function and mechanism of RNF90 in antiviral innate immunity.


Subject(s)
Adaptor Proteins, Signal Transducing/metabolism , Immunity, Innate , Tripartite Motif Proteins/metabolism , Ubiquitin-Protein Ligases/metabolism , Vesicular Stomatitis/metabolism , Vesiculovirus/immunology , Adaptor Proteins, Signal Transducing/genetics , Adaptor Proteins, Signal Transducing/immunology , Animals , Chlorocebus aethiops , Cytokines/genetics , Cytokines/immunology , Cytokines/metabolism , HEK293 Cells , HaCaT Cells , Host-Pathogen Interactions , Humans , Mice, Knockout , Proteasome Endopeptidase Complex/metabolism , Proteolysis , Signal Transduction , THP-1 Cells , Tripartite Motif Proteins/genetics , Tripartite Motif Proteins/immunology , Ubiquitin-Protein Ligases/genetics , Ubiquitin-Protein Ligases/immunology , Ubiquitination , Vero Cells , Vesicular Stomatitis/genetics , Vesicular Stomatitis/immunology , Vesicular Stomatitis/virology , Vesiculovirus/pathogenicity
8.
Front Plant Sci ; 12: 830390, 2021.
Article in English | MEDLINE | ID: mdl-35185971

ABSTRACT

Chloroplasts are indispensable for higher plants. The growth and development of plants are very sensitive to environmental temperature changes, and chloroplast development is also regulated by adverse environmental temperatures. However, the molecular mechanism of how plants coordinate chloroplast development and environmental temperature changes remains largely unknown. Here, a temperature-conditioned chloroplast development defective mutant thermo-sensitive mutant in leaf color 2 (tsl2) of Arabidopsis was obtained through a forward genetic screening. The tsl2 mutant showed a weak yellowish phenotype at normal growth temperature (22°C), and the phenotype was more pronounced at low growth temperature (16°C) and largely rescued at high growth temperature (29°C). Bulk Segregant Analysis (BSA) revealed that TSL2 encodes FtsH-Inactive Protein 5 (FtsHi5). Genetic complementation analysis confirmed that complemented expression of FtsHi5 rescued the chlorophyll content and thylakoid development defects observed in tsl2 mutants at 16°C. Quantitative mass spectrometry analysis with Tandem Mass Tag (TMT) isobaric labeling revealed broad changes in the chloroplast proteome of tsl2 mutant plants at low temperature, which is agreed with the impaired chloroplast biogenesis and function in tsl2 plants. Together, our data demonstrates that FtsHi5/TSL2 plays an important role in chloroplast development and protein accumulation in chloroplasts, especially at low environmental temperatures in Arabidopsis.

9.
Mol Plant ; 14(1): 95-114, 2021 01 04.
Article in English | MEDLINE | ID: mdl-33137518

ABSTRACT

The endoplasmic reticulum, chloroplasts, and mitochondria are major plant organelles for protein synthesis, photosynthesis, metabolism, and energy production. Protein homeostasis in these organelles, maintained by a balance between protein synthesis and degradation, is essential for cell functions during plant growth, development, and stress resistance. Nucleus-encoded chloroplast- and mitochondrion-targeted proteins and ER-resident proteins are imported from the cytosol and undergo modification and maturation within their respective organelles. Protein folding is an error-prone process that is influenced by both developmental signals and environmental cues; a number of mechanisms have evolved to ensure efficient import and proper folding and maturation of proteins in plant organelles. Misfolded or damaged proteins with nonnative conformations are subject to degradation via complementary or competing pathways: intraorganelle proteases, the organelle-associated ubiquitin-proteasome system, and the selective autophagy of partial or entire organelles. When proteins in nonnative conformations accumulate, the organelle-specific unfolded protein response operates to restore protein homeostasis by reducing protein folding demand, increasing protein folding capacity, and enhancing components involved in proteasome-associated protein degradation and autophagy. This review summarizes recent progress on the understanding of protein quality control in the ER, chloroplasts, and mitochondria in plants, with a focus on common mechanisms shared by these organelles during protein homeostasis.


Subject(s)
Organelles/metabolism , Plant Proteins/metabolism , Homeostasis , Plant Proteins/chemistry , Protein Folding , Proteolysis , Unfolded Protein Response
10.
ISA Trans ; 110: 39-52, 2021 Apr.
Article in English | MEDLINE | ID: mdl-33127079

ABSTRACT

In this paper, to reduce the computational and communication burden, the event-triggered distributed zero-sum differential game problem for multi-agent systems is investigated. Firstly, based on the Minimax principle, an adaptive event-triggered distributed iterative differential game strategy is derived with an adaptive triggering condition for updating the control scheme aperiodically. Then, to implement this proposed strategy, the solution of coupled Hamilton-Jacobi-Isaacs​ (HJI) equation is approximated by constructing the critic neural network (NN). In order to further relax the restrictive persistent of excitation (PE) condition, a novel PE-free updating law is designed by using the experience replay method. Then, the distributed event-triggered nonlinear system is expressed as an impulsive dynamical system. After analyzing the stability, the developed strategy ensures the uniformly ultimately bounded (UUB) of all the closed-loop signals. Moreover, the minimal intersample time is proved to be lower bounded, which avoids the infamous Zeno behavior. Finally, the simulation results show that the number of controller update is reduced obviously, which saves the computational and communication resources.

11.
ISA Trans ; 107: 294-306, 2020 Dec.
Article in English | MEDLINE | ID: mdl-32798045

ABSTRACT

This paper addresses a missile-target interception guidance process considering acceleration saturation and target maneuver as a constrained nonlinear tracking issue. A dynamic auxiliary system is designed for compensating the effects of constrained input, and external disturbances are counteracted through designing a nonlinear disturbance observer (NDO). The feedforward+feedback composite architecture is built in which a feedforward backstepping control and a feedback optimal control is presented recurrently. Furthermore, the parameter adaptive updating laws are derived to estimate the unknown functions online. Subsequently, the boundedness of the closed-loop signals are guaranteed. The predefined cost function is also ensured to be minimized. Furthermore, the control input is prevented violating its boundary. The contrastive simulation results demonstrate that the robustness of the proposed method is more superior to the nonsingular terminal sliding mode (NTSM) and the proportional navigation (PN) methods.

12.
J Genet Genomics ; 47(4): 201-212, 2020 04 20.
Article in English | MEDLINE | ID: mdl-32505546

ABSTRACT

Chloroplasts are important for plant growth and development. RNA editing in chloroplast converts cytidines (Cs) to uridines (Us) at specific transcript positions and provides a correction mechanism to restore conserved codons or creates start or stop codons. However, the underlined molecular mechanism is not yet fully understood. In the present study, we identified a thermo-sensitive mutant in leaf color 1 (tsl1) and found that TSL1 is allelic to DELAYED GREENING 1 (DG1). The missense mutation of DG1 in tsl1 mutant confers a high temperature sensitivity and impaired chloroplast development at an elevated ambient temperature in Arabidopsis. Subsequent analysis showed that chloroplast RNA editing at several sites including accD-1568, ndhD-2, and petL-5 is impaired in tsl1 mutant plants grown at an elevated temperature. DG1 interacts with MORF2 and other proteins such as DYW1 and DYW2 involved in chloroplast RNA editing. In vitro RNA electrophoretic mobility shift assay demonstrated that DG1 binds to RNA targets such as accD, ndhD, and petL. Thus, our results revealed that DG1 is important for maintaining chloroplast mRNA editing in Arabidopsis.


Subject(s)
Arabidopsis Proteins/genetics , Carrier Proteins/genetics , Chloroplasts/genetics , Mitochondrial Proteins/genetics , RNA, Chloroplast/genetics , Amino Acid Sequence/genetics , Arabidopsis/genetics , Arabidopsis/growth & development , Chlorophyll/biosynthesis , Chlorophyll/genetics , Gene Expression Regulation, Plant , Mutation/genetics , Plant Leaves/genetics , Plant Leaves/growth & development , RNA Editing , Temperature
13.
ISA Trans ; 83: 42-52, 2018 Dec.
Article in English | MEDLINE | ID: mdl-30144978

ABSTRACT

In this paper, an adaptive predictive optimal control scheme for a class of block strict-feedback nonlinear systems is proposed by integrating the adaptive dynamic programming (ADP) technique, predictive control and backstepping method. The basic idea is that designing the virtual and actual controls of backstepping is the optimized solutions of corresponding subsystems. Firstly, the virtual control input is derived for the subsystem by utilizing ADP technique, in which a critic neural network (NN) is constructed to approximate the solution of the associated Hamilton-Jacobi-Bellman (HJB) equation. Then, to further reduce the computational complexity, the actual controller is given in an analytical form by using continuous-time predictive approach. Theoretical analysis guarantees the stability of the closed-loop system by Lyapunov method. Finally, the effectiveness of the proposed adaptive predictive optimal control scheme is validated through an application to missile-target engagement.

14.
Neural Netw ; 106: 8-19, 2018 Oct.
Article in English | MEDLINE | ID: mdl-30007124

ABSTRACT

This paper investigates the distributed differential game tracking problem for nonlinear multi-agent systems with output constraint under a fixed directed graph. Each follower can be taken as strict-feedback structure with uncertain nonlinearities and input saturation. Firstly, by utilizing the command filtered backstepping technique, the distributed tracking control problem of multi-agent systems in strict-feedback form can be transformed into an equivalent distributed differential game problem of tracking error dynamics in affine form by designing a distributed feedforward tracking controller, in which neural networks (NNs) and the auxiliary system are introduced to deal with the unknown nonlinearities and input saturation, respectively. Especially, a novel barrier Lyapunov function (BLF) is firstly introduced to tackle with the output constraint. Subsequently, by using adaptive dynamic programming (ADP) technique, the distributed zero-sum differential game strategy is derived, in which a critic network is constructed to approximate the cooperative cost function online with a novel updating law. Therefore, the whole distributed control scheme not only guarantees the closed-loop signals to be cooperatively uniformly ultimately bounded (CUUB), but also ensures the cooperative cost function to be minimized. Meanwhile, the output constraint and input saturation are not violated. Finally, simulation results demonstrate the effectiveness of the proposed method.


Subject(s)
Feedback , Neural Networks, Computer , Uncertainty , Algorithms , Computer Simulation , Nonlinear Dynamics
15.
New Phytol ; 220(2): 476-487, 2018 10.
Article in English | MEDLINE | ID: mdl-29974976

ABSTRACT

DNA replication is a fundamental process for the faithful transmission of genetic information in all living organisms. Many endogenous and environmental signals impede fork progression during DNA synthesis, which induces replication errors and DNA replication stress. Chromatin remodeling factors regulate nucleosome occupancy and the histone composition of the nucleosome in chromatin; however, whether chromatin remodeling factors are involved in the DNA replication stress response in plants is unknown. We reveal that chromatin remodeling factor CHR18 plays important roles in DNA replication stress in Arabidopsis thaliana by interacting with the DNA replication protein RPA1A. According to the genetic analysis, the loss of function of either CHR18 or RPA1A confers a high sensitivity to DNA replication stress in Arabidopsis. CHR18 interacts with RPA1A in both yeast cells and tobacco epidermal cells. The coexpression of RPA1A and CHR18 enhances the accumulation of CHR18 in nuclear foci in plants. CHR18 is a typical nuclear-localized chromatin remodeling factor with ATPase activity. Our results demonstrate that during DNA synthesis in plants, RPA1A interacts with CHR18 and recruits CHR18 to nuclear foci to resolve DNA replication stress, which is important for cell propagation and root growth in Arabidopsis plants.


Subject(s)
Arabidopsis Proteins/metabolism , Arabidopsis/metabolism , Chromatin Assembly and Disassembly , DNA Helicases/metabolism , DNA Replication , DNA-Binding Proteins/metabolism , Stress, Physiological , Adenosine Triphosphatases/metabolism , Arabidopsis Proteins/chemistry , Cell Nucleus/metabolism , DNA Helicases/chemistry , DNA-Binding Proteins/chemistry , Mutation/genetics , Plant Leaves/metabolism , Protein Binding , Protein Interaction Mapping
16.
Mol Plant ; 11(5): 736-749, 2018 05 07.
Article in English | MEDLINE | ID: mdl-29567449

ABSTRACT

Grain size and shape are important determinants of grain weight and yield in rice. Here, we report a new major quantitative trait locus (QTL), qTGW3, that controls grain size and weight in rice. This locus, qTGW3, encodes OsSK41 (also known as OsGSK5), a member of the GLYCOGEN SYNTHASE KINASE 3/SHAGGY-like family. Rice near-isogenic lines carrying the loss-of-function allele of OsSK41 have increased grain length and weight. We demonstrate that OsSK41 interacts with and phosphorylates AUXIN RESPONSE FACTOR 4 (OsARF4). Co-expression of OsSK41 with OsARF4 increases the accumulation of OsARF4 in rice protoplasts. Loss of function of OsARF4 results in larger rice grains. RNA-sequencing analysis suggests that OsARF4 and OsSK41 repress the expression of a common set of downstream genes, including some auxin-responsive genes, during rice grain development. The loss-of-function form of OsSK41 at qTGW3 represents a rare allele that has not been extensively utilized in rice breeding. Suppression of OsSK41 function by either targeted gene editing or QTL pyramiding enhances rice grain size and weight. Thus, our study reveals the important role of OsSK41 in rice grain development and provides new candidate genes for genetic improvement of grain yield in rice and perhaps in other cereal crops.


Subject(s)
Glycogen Synthase Kinase 3/genetics , Oryza/genetics , Quantitative Trait Loci , Transcription Factors/metabolism , Cloning, Molecular , Edible Grain , Gene Expression Regulation, Plant , Oryza/anatomy & histology , Oryza/enzymology , Phosphorylation
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