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1.
Molecules ; 27(10)2022 May 16.
Article in English | MEDLINE | ID: mdl-35630659

ABSTRACT

The study on the mechanism and kinetics of mRNA degradation provides a new vision for chemical intervention on protein expression. The AU enrichment element (ARE) in mRNA 3'-UTR can be recognized and bound by the ARE binding protein (AU-rich Element factor (AUF1) to recruit RNase for degradation. In the present study, we proposed a novel strategy for expression regulation that interferes with the AUF1-RNA binding. A small-molecule compound, JNJ-7706621, was found to bind AUF1 protein and inhibit mRNA degradation by screening the commercial compound library. We discovered that JNJ-7706621 could inhibit the expression of AUF1 targeted gene IL8, an essential pro-inflammatory factor, by interfering with the mRNA homeostatic state. These studies provide innovative drug design strategies to regulate mRNA homeostasis.


Subject(s)
Heterogeneous-Nuclear Ribonucleoprotein D , 3' Untranslated Regions , Heterogeneous Nuclear Ribonucleoprotein D0 , Heterogeneous-Nuclear Ribonucleoprotein D/genetics , Heterogeneous-Nuclear Ribonucleoprotein D/metabolism , RNA Stability , RNA, Messenger/genetics , RNA, Messenger/metabolism
2.
Expert Opin Ther Pat ; 29(5): 353-367, 2019 05.
Article in English | MEDLINE | ID: mdl-31068032

ABSTRACT

INTRODUCTION: The important role of MYC in tumorigenesis makes it particularly important to design MYC modulators. Over the past decade, researchers have raised a number of strategies for designing MYC modulators, some of which are already in clinical trials. This paper aims to review the patents of MYC modulators. AREAS COVERED: The important biological relevance of c-MYC and the regulation pathways related to c-MYC are briefly introduced. Base on that, the MYC modulators reported in published patents and references primarily for cancer treatment are outlined, highlighting the structures and biological activities. EXPERT OPINION: There has been a growing awareness of finding and designing MYC modulators as novel anticancer drugs over recent years. Patents involving the discovery, synthesis, and application of MYC modulators are particularly important for further development in this field. Although finding direct MYC inhibitors or binders is challenging, MYC cannot be simply defined as an undruggable target. There is still substantial evidence proving the concept that MYC modulators can benefit to the treatment of both human hematological malignancies and solid tumors. More efforts should be taken to improve the activity and specificity of MYC modulators.


Subject(s)
Antineoplastic Agents/pharmacology , Neoplasms/drug therapy , Proto-Oncogene Proteins c-myc/antagonists & inhibitors , Animals , Drug Design , Drug Development/methods , Humans , Molecular Targeted Therapy , Neoplasms/pathology , Patents as Topic , Proto-Oncogene Proteins c-myc/metabolism
3.
Molecules ; 24(3)2019 Jan 22.
Article in English | MEDLINE | ID: mdl-30678288

ABSTRACT

G-quadruplex is a special secondary structure of nucleic acids in guanine-rich sequences of genome. G-quadruplexes have been proved to be involved in the regulation of replication, DNA damage repair, and transcription and translation of oncogenes or other cancer-related genes. Therefore, targeting G-quadruplexes has become a novel promising anti-tumor strategy. Different kinds of small molecules targeting the G-quadruplexes have been designed, synthesized, and identified as potential anti-tumor agents, including molecules directly bind to the G-quadruplex and molecules interfering with the binding between the G-quadruplex structures and related binding proteins. This review will explore the feasibility of G-quadruplex ligands acting as anti-tumor drugs, from basis to application. Meanwhile, since helicase is the most well-defined G-quadruplex-related protein, the most extensive research on the relationship between helicase and G-quadruplexes, and its meaning in drug design, is emphasized.


Subject(s)
Drug Development , G-Quadruplexes , Ligands , Antineoplastic Agents/chemistry , Antineoplastic Agents/pharmacology , DNA-Binding Proteins/chemistry , DNA-Binding Proteins/metabolism , Humans , Models, Molecular , Nucleic Acids/chemistry , Nucleic Acids/metabolism , Protein Binding , Structure-Activity Relationship
4.
J Med Chem ; 61(15): 6629-6646, 2018 Aug 09.
Article in English | MEDLINE | ID: mdl-29799749

ABSTRACT

The human proto-oncogene neuroblastoma RAS ( NRAS) contains a guanine-rich sequence in the 5'-untranslated regions (5'-UTR) of the mRNA that could form an RNA G-quadruplex structure. This structure acts as a repressor for NRAS translation and could be a potential target for anticancer drugs. Our previous studies found an effective scaffold, the quindoline scaffold, for binding and stabilizing the DNA G-quadruplex structures. Here, on the basis of the previous studies and reported RNA-specific probes, a series of novel p-(methylthio)styryl substituted quindoline (MSQ) derivatives were designed, synthesized, and evaluated as NRAS RNA G-quadruplex ligands. Panels of experiments turned out that the introduction of p-(methylthio)styryl side chain could enhance the specific binding to the NRAS RNA G-quadruplex. One of the hits, 4a-10, showed strong stabilizing activity on the G-quadruplex and subsequently repressed NRAS's translation and inhibited tumor cells proliferation. Our finding provided a novel strategy to discover novel NRAS repressors by specifically binding to the RNA G-quadruplex in the 5'-UTR of mRNA.


Subject(s)
Alkaloids/chemical synthesis , Alkaloids/pharmacology , Drug Design , G-Quadruplexes/drug effects , GTP Phosphohydrolases/genetics , Indoles/chemical synthesis , Indoles/pharmacology , Membrane Proteins/genetics , Quinolines/chemical synthesis , Quinolines/pharmacology , RNA/chemistry , Styrene/chemistry , Alkaloids/chemistry , Cell Cycle Checkpoints/drug effects , Cell Line, Tumor , Chemistry Techniques, Synthetic , Humans , Indoles/chemistry , Proto-Oncogene Mas , Quinolines/chemistry
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