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1.
Methods Mol Biol ; 2742: 185-237, 2024.
Article in English | MEDLINE | ID: mdl-38165625

ABSTRACT

The field of data analysis, preparation, and machine learning is rapidly expanding, offering numerous libraries and resources for exploration. Researchers gain knowledge through various channels, but few resources provide a comprehensive framework for building machine-learning models. We present a step-by-step framework for constructing a robust Random Forest classification model to fill this gap. Using the trained model, we predict if individuals visiting Sanoviv Medical Institute between 2020 and 2023 participated in the Lyme disease program based on age, symptoms, blood count, and chemistry results. While not exhaustive, the methods in each step provide a valuable starting point for researchers, promoting an understanding of the fundamental approach to model creation. The framework encourages researchers to explore beyond the outlined techniques, fostering innovation and experimentation.


Subject(s)
Machine Learning , Patient Participation , Humans , Lyme Disease
2.
Methods Mol Biol ; 2742: 173-183, 2024.
Article in English | MEDLINE | ID: mdl-38165624

ABSTRACT

This chapter presents a practical guide for conducting sentiment analysis using Natural Language Processing (NLP) techniques in the domain of tick-borne disease text. The aim is to demonstrate the process of how the presence of bias in the discourse surrounding chronic manifestations of the disease can be evaluated. The goal is to use a dataset of 5643 abstracts collected from scientific journals on the topic of chronic Lyme disease to demonstrate using Python, the steps for conducting sentiment analysis using pretrained language models and the process of validating the preliminary results using both interpretable machine learning tools, as well as a novel methodology of leveraging emerging state-of-the-art large language models like ChatGPT. This serves as a useful resource for researchers and practitioners interested in using NLP techniques for sentiment analysis in the medical domain.


Subject(s)
Lyme Disease , Sentiment Analysis , Humans , Publications , Language , Machine Learning
3.
EPJ Data Sci ; 12(1): 11, 2023.
Article in English | MEDLINE | ID: mdl-37122585

ABSTRACT

Accurately forecasting patient arrivals at Urgent Care Clinics (UCCs) and Emergency Departments (EDs) is important for effective resourcing and patient care. However, correctly estimating patient flows is not straightforward since it depends on many drivers. The predictability of patient arrivals has recently been further complicated by the COVID-19 pandemic conditions and the resulting lockdowns. This study investigates how a suite of novel quasi-real-time variables like Google search terms, pedestrian traffic, the prevailing incidence levels of influenza, as well as the COVID-19 Alert Level indicators can both generally improve the forecasting models of patient flows and effectively adapt the models to the unfolding disruptions of pandemic conditions. This research also uniquely contributes to the body of work in this domain by employing tools from the eXplainable AI field to investigate more deeply the internal mechanics of the models than has previously been done. The Voting ensemble-based method combining machine learning and statistical techniques was the most reliable in our experiments. Our study showed that the prevailing COVID-19 Alert Level feature together with Google search terms and pedestrian traffic were effective at producing generalisable forecasts. The implications of this study are that proxy variables can effectively augment standard autoregressive features to ensure accurate forecasting of patient flows. The experiments showed that the proposed features are potentially effective model inputs for preserving forecast accuracies in the event of future pandemic outbreaks.

4.
Digit Health ; 8: 20552076221117404, 2022.
Article in English | MEDLINE | ID: mdl-35990109

ABSTRACT

This study investigates how female and male genders are positioned in fat stigmatising discourses that are being conducted over social media. Weight-based linguistic data corpus, extracted from three popular social media (SM) outlets, Twitter, YouTube and Reddit, was examined for fat stigmatising content. A mixed-method analysis comprising sentiment analysis, word co-occurrences and qualitative analysis, assisted our investigation of the corpus for body objectification themes and gender-based differences. Objectification theory provided the underlying framework to examine the experiential consequences of being fat across both genders. Five objectifying themes, namely, attractiveness, physical appearance, lifestyle choices, health and psychological well-being, emerged from the analysis. A deeper investigation into more facets of the social interaction data revealed overall positive and negative attitudes towards obesity, which informed on existing notions of gendered body objectification and weight/fat stigmatisation. Our findings have provided a holistic outlook on weight/fat stigmatising content that is posted online which can further inform policymakers in planning suitable props to facilitate more inclusive SM spaces. This study showcases how lexical analytics can be conducted by combining a variety of data mining methods to draw out insightful subject-related themes that add to the existing knowledge base; therefore, has both practical and theoretical implications.

5.
Article in English | MEDLINE | ID: mdl-35194560

ABSTRACT

This study investigates current approaches to learning analytics (LA) dashboarding while highlighting challenges faced by education providers in their operationalization. We analyze recent dashboards for their ability to provide actionable insights which promote informed responses by learners in making adjustments to their learning habits. Our study finds that most LA dashboards merely employ surface-level descriptive analytics, while only few go beyond and use predictive analytics. In response to the identified gaps in recently published dashboards, we propose a state-of-the-art dashboard that not only leverages descriptive analytics components, but also integrates machine learning in a way that enables both predictive and prescriptive analytics. We demonstrate how emerging analytics tools can be used in order to enable learners to adequately interpret the predictive model behavior, and more specifically to understand how a predictive model arrives at a given prediction. We highlight how these capabilities build trust and satisfy emerging regulatory requirements surrounding predictive analytics. Additionally, we show how data-driven prescriptive analytics can be deployed within dashboards in order to provide concrete advice to the learners, and thereby increase the likelihood of triggering behavioral changes. Our proposed dashboard is the first of its kind in terms of breadth of analytics that it integrates, and is currently deployed for trials at a higher education institution.

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