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1.
Photochem Photobiol ; 84(3): 727-33, 2008.
Article in English | MEDLINE | ID: mdl-18435621

ABSTRACT

A triplex-forming oligonucleotide (TFO), HPRT3, conjugated to a psoralen derivative, was designed to target a psoralen reaction site within the HPRT gene. HPRT3 bound with high affinity to a synthetic duplex target sequence. At a uniform UVA radiation dose, the ratio of psoralen monoadducts (MA) to interstrand crosslinks decreased and inverted with increasing TFO concentration. As the TFO concentration increased from 10 nm to 10 microm, the efficiency of psoralen MA formation remained relatively constant but the efficiency of interstrand crosslink formation increased several-fold. Neither shortening the TFO to reduce its dissociation constant nor altering the DNA sequences flanking the TFO binding site altered the concentration dependence of MA and crosslink yields. The psoralen photokinetics associated with 10 nm HPRT3 converted to those associated with 10 microm HPRT3 with the addition of other unrelated TFOs at 10 microm that do not specifically interact with the HPRT3 target sequence. Glycerol at concentrations of 0.5% (vol/vol) or higher also mimicked high TFO concentrations in enhancing crosslink formation. These results demonstrate that while psoralen may be targeted to react at a particular sequence by TFOs, photoreactivity associated with triplex formation is also modulated by sequence-independent factors that may affect the local macromolecular environment.


Subject(s)
Cross-Linking Reagents , DNA/chemistry , Ficusin/chemistry , Oligonucleotides/chemistry , DNA/chemical synthesis , Kinetics , Molecular Conformation
2.
Appl Biochem Biotechnol ; 142(2): 105-24, 2007 Aug.
Article in English | MEDLINE | ID: mdl-18025573

ABSTRACT

Pichia pastoris has been used extensively and successfully to express recombinant proteins. In this review, we summarize the elements required for expressing heterologous proteins, and discuss various factors in applying this system for protein expression. These elements include vectors, host strains, heterologous gene integration into the genome, secretion factors, and the glycosylation profile. In particular, we discuss and evaluate the recent progress in optimizing the fermentation process to improve the yield and stability of expressed proteins. Optimization can be achieved by controlling the medium composition, pH, temperature, and dissolved oxygen, as well as by methanol induction and feed mode.


Subject(s)
Genetic Vectors , Pichia/genetics , Recombinant Proteins/genetics , Fermentation , Glycosylation , Hydrogen-Ion Concentration , Methanol/metabolism , Models, Genetic , Oxygen/metabolism , Pichia/metabolism , Recombinant Proteins/metabolism , Temperature
3.
Am J Physiol Lung Cell Mol Physiol ; 285(3): L628-33, 2003 Sep.
Article in English | MEDLINE | ID: mdl-12765879

ABSTRACT

Inhaled nitric oxide (iNO) is used to treat a number of disease processes. Although in vitro data suggest that nitric oxide (NO) alters surfactant protein gene expression, the effects in vivo have not been studied. The objective of this study was to evaluate the effects of iNO on surfactant protein (SP)-A, -B, and -C gene expression in the intact lamb. Thirteen 4-wk-old lambs were mechanically ventilated with 21% oxygen and received iNO at 40 ppm (n = 7) or vehicle gas (n = 6) for 24 h. Peripheral lung biopsies were obtained at 0, 12, and 24 h and analyzed for surfactant mRNA, protein, and total DNA content. Inhaled NO increased SP-A and SP-B mRNA content by 80% from 0 to 12 h and by 78 and 71%, respectively, from 0 to 24 h. There was an increase in SP-A and SP-B protein content by 45% from 0 to 12 h, and a decrease by 70 and 65%, respectively, from 0 to 24 h. DNA content was unchanged. The mechanisms and physiological effects of these findings warrant further investigation.


Subject(s)
Nitric Oxide/pharmacology , Pulmonary Surfactant-Associated Proteins/genetics , Respiratory Mucosa/drug effects , Respiratory Mucosa/physiology , Administration, Inhalation , Animals , DNA/analysis , Gene Expression/drug effects , Pulmonary Circulation/drug effects , Pulmonary Surfactant-Associated Protein A/genetics , Pulmonary Surfactant-Associated Protein B/genetics , Pulmonary Surfactant-Associated Protein C/genetics , RNA, Messenger/analysis , Sheep
4.
Am J Respir Cell Mol Biol ; 29(1): 81-7, 2003 Jul.
Article in English | MEDLINE | ID: mdl-12600831

ABSTRACT

We have previously reported that mechanical distention of alveolar epithelial type II cells in culture favored the expression of the type I cell phenotype and inhibited the expression of the type II cell phenotype. The objective of the present study was to investigate the effects of continuous mechanical contraction on the expression of specific markers for the type I and type II cell phenotypes in cultured alveolar type II cells. Type II cells were mechanically contracted in culture at varying amplitudes and times. Cells were analyzed for mRNA and protein content of markers of the type I (RTI40) and type II (surfactant proteins [SPs] A, B, and C) phenotypes. Continuous contraction of culture membrane surface area by 25% for a duration of 4 h resulted in an 83% increase in SP-A, a 42% increase in SP-B, and a 230% increase in SP-C, in comparison with controls. After 12 h of contraction, RTI40 mRNA content decreased to 59% of control levels. A minimal contraction of 20% of culture membrane surface area was required to modulate expression of the type II cell markers. In summary, mechanical contraction favors expression of the type II cell phenotype and inhibits expression of the type I cell phenotype in a time- and amplitude-dependent manner.


Subject(s)
Epithelial Cells/physiology , Pulmonary Alveoli/cytology , Respiratory Mechanics/physiology , Animals , Biomarkers/analysis , Cell Culture Techniques/instrumentation , Cell Survival/physiology , Cells, Cultured , Epithelial Cells/cytology , Male , Mechanics , Membrane Glycoproteins , Membrane Proteins/genetics , Membrane Proteins/metabolism , Phenotype , Pulmonary Alveoli/physiology , Pulmonary Surfactant-Associated Protein A/genetics , Pulmonary Surfactant-Associated Protein A/metabolism , Pulmonary Surfactant-Associated Protein B/genetics , Pulmonary Surfactant-Associated Protein B/metabolism , Pulmonary Surfactant-Associated Protein C/genetics , RNA, Messenger/metabolism , Rats , Rats, Sprague-Dawley , Time Factors
5.
J Allergy Clin Immunol ; 111(2): 321-7, 2003 Feb.
Article in English | MEDLINE | ID: mdl-12589352

ABSTRACT

BACKGROUND: Inhaled corticosteroids, such as budesonide, attenuate the inflammatory response in asthma. However, patient noncompliance and side effects of available inhaled corticosteroids limit their use. Liposomes are currently used in medicine to deliver a variety of drugs. OBJECTIVE: The objective of our study was to determine whether weekly therapy with budesonide encapsulated in sterically stabilized (stealth) liposomes would be comparable to daily budesonide therapy in reducing allergic inflammation. METHODS: Ovalbumin-sensitized C57/Black 6 mice received aerosolized (1) budesonide encapsulated in stealth or conventional liposomes, administered weekly, (2) budesonide (without liposomes), administered either daily or weekly, or (3) empty stealth liposomes, administered weekly. All treatment groups were compared with sensitized untreated or unsensitized mice. Histopathologic examination of the lung tissues and measurements of eosinophil peroxidase activity, peripheral blood eosinophil counts, and total serum IgE levels were done weekly for 4 weeks. RESULTS: Weekly therapy with budesonide encapsulated in stealth liposomes was as effective as daily budesonide therapy in decreasing lung inflammation and lowering eosinophil peroxidase activity, peripheral blood eosinophils, and total serum IgE levels. In none of the other groups was there a significant decrease in the inflammatory parameters evaluated. CONCLUSION: We conclude that weekly therapy with budesonide encapsulated in stealth liposomes is as effective as daily budesonide in reducing markers of lung inflammation in experimental asthma. This novel strategy offers an effective alternative to standard daily budesonide therapy in asthma and has the potential to reduce toxicity and improve compliance.


Subject(s)
Anti-Inflammatory Agents/administration & dosage , Asthma/drug therapy , Budesonide/administration & dosage , Aerosols , Animals , Asthma/etiology , Asthma/pathology , Drug Administration Schedule , Eosinophils , Immunoglobulin E/blood , Liposomes , Male , Mice , Mice, Inbred C57BL , Ovalbumin/immunology
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