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1.
Solid State Nucl Magn Reson ; 120: 101811, 2022 Aug.
Article in English | MEDLINE | ID: mdl-35792451

ABSTRACT

We study the metal-organic framework (MOF) ZIF-67 with 1H and 13C nuclear magnetic resonance (NMR). In addition to the usual orbital chemical shifts, we observe spinning sideband manifolds in the NMR spectrum due to hyperfine interactions of the paramagnetic cobalt with 1H and 13C. Both orbital and paramagnetic chemical shifts are in good agreement with values calculated from first principles, allowing high-confidence assignment of the observed peaks to specific sites within the MOF. Our measured resonance shifts, line shapes, and spin lattice relaxation rates are also consistent with calculated values. We show that molecules in the pores of the MOF can exhibit high-resolution NMR spectra with fast spin lattice relaxation rates due to dipole-dipole couplings to the Co2+ nodes in the ZIF-67 lattice, showcasing NMR spectroscopy as a powerful tool for identification and characterization of "guests" that may be hosted by the MOF in electrochemical and catalytic applications.

2.
Sci Rep ; 11(1): 442, 2021 Jan 11.
Article in English | MEDLINE | ID: mdl-33432078

ABSTRACT

We describe experiments and simulations to investigate the dynamics of a ball bouncing on a rough vibrating surface. Directly measuring the impulse due to each bounce we find that the frictional interaction with the surface is strongly enhanced near to the side wall. The enhanced dissipation arises as a consequence of the coupling between the collision, rotation and surface friction. This dissipation, which for our experimental conditions was estimated to be up to three times larger than the more obvious inelastic collision, can result in an enhanced probability density near boundaries and particle-particle spatial correlations. Our findings imply that the effective particle collision properties cannot be considered independently of the surface's frictional properties.

3.
Phys Rev Lett ; 121(6): 064502, 2018 Aug 10.
Article in English | MEDLINE | ID: mdl-30141657

ABSTRACT

We demonstrate that the ubiquitous laboratory magnetic stirrer provides a simple passive method of magnetic levitation, in which the so-called "flea" levitates indefinitely. We study the onset of levitation and quantify the flea's motion (a combination of vertical oscillation, spinning and "waggling"), finding excellent agreement with a mechanical analytical model. The waggling motion drives recirculating flow, producing a centripetal reaction force that stabilized the flea. Our findings have implications for the locomotion of artificial swimmers and the development of bidirectional microfluidic pumps, and they provide an alternative to sophisticated commercial levitators.

4.
Phys Rev Lett ; 120(16): 167701, 2018 Apr 20.
Article in English | MEDLINE | ID: mdl-29756909

ABSTRACT

We experimentally study the coupling of group V donor spins in silicon to mechanical strain, and measure strain-induced frequency shifts that are linear in strain, in contrast to the quadratic dependence predicted by the valley repopulation model (VRM), and therefore orders of magnitude greater than that predicted by the VRM for small strains |ϵ|<10^{-5}. Through both tight-binding and first principles calculations we find that these shifts arise from a linear tuning of the donor hyperfine interaction term by the hydrostatic component of strain and achieve semiquantitative agreement with the experimental values. Our results provide a framework for making quantitative predictions of donor spins in silicon nanostructures, such as those being used to develop silicon-based quantum processors and memories. The strong spin-strain coupling we measure (up to 150 GHz per strain, for Bi donors in Si) offers a method for donor spin tuning-shifting Bi donor electron spins by over a linewidth with a hydrostatic strain of order 10^{-6}-as well as opportunities for coupling to mechanical resonators.

5.
Sensors (Basel) ; 17(8)2017 Jul 29.
Article in English | MEDLINE | ID: mdl-28758936

ABSTRACT

This paper presents a proof-of-concept optical detector array sensor system to be used in Unmanned Underwater Vehicle (UUV) navigation. The performance of the developed optical detector array was evaluated for its capability to estimate the position, orientation and forward velocity of UUVs with respect to a light source fixed in underwater. The evaluations were conducted through Monte Carlo simulations and empirical tests under a variety of motion configurations. Monte Carlo simulations also evaluated the system total propagated uncertainty (TPU) by taking into account variations in the water column turbidity, temperature and hardware noise that may degrade the system performance. Empirical tests were conducted to estimate UUV position and velocity during its navigation to a light beacon. Monte Carlo simulation and empirical results support the use of the detector array system for optics based position feedback for UUV positioning applications.

6.
J Anim Sci ; 95(1): 455-474, 2017 Jan.
Article in English | MEDLINE | ID: mdl-28177389

ABSTRACT

Fecal nutrients and apparent total tract digestibility (ATTD) were predicted using near-infrared spectroscopy (NIRS) of feces collected from the pen floor or the rectum of feedlot cattle in 2 studies, and pen floor samples were assessed for their ability to predict NE, ADG, and G:F. In study 1, 160 crossbred beef steers in 16 pens (4 pens per treatment) were fed dry-rolled barley or wheat (89% of diet DM) processed at 2 levels. Study 2 utilized 160 crossbred beef steers in 20 pens (5 pens per treatment) that were fed dryrolled barley with 4 levels of barley silage (0%, 4%, 8%, and 12% of diet DM). Both studies fed steers to a target weight of 650 kg. Differences in composition of feces collected from the rectum and the pen floor of a subset of steers (3 to 7) were examined. Fecal pats from the pen floor of each pen were collected throughout the feeding period and composited by pen. Except for DM, which was higher ( 0.01) in pen floor than rectal fecal samples, there were minimal differences in fecal constituents between collection methods. In study 1, interactions between grain type and processing index ( ≤ 0.05) were observed, with a reduction in DM, OM, and starch and an increase in NDF and ADL concentrations being associated with more extensively processed wheat than barley. As grain was more extensively processed, ATTD of all nutrients increased ( 0.01). In study 2, fecal ADF and ADL linearly increased ( 0.01) with increasing silage in the diet, whereas fecal DM and N linearly decreased ( 0.01). Digestibility of all nutrients except starch linearly decreased ( 0.01) with increasing silage. Apparent total tract digestibility of GE predicted using NIRS was related to NEg of the diets as estimated by performance for the wheat-fed steers in study 1 ( = 0.58, = 0.03) and those fed increasing silage in study 2 ( = 0.43, < 0.01). Similarly, observed ADG could be predicted using NIRS for steers fed wheat in study 1 ( = 0.48, = 0.05) and silage in study 2 ( = 0.40, < 0.01), but G:F could not. Using NIRS of feces collected from multiple cattle off the feedlot pen floor demonstrated potential for predicting growth performance of finishing cattle. However, grain type and stage of maturity of the cattle impacted the predictability of equations. Increasing the sample size and sampling frequency may be necessary to improve predictions.


Subject(s)
Animal Feed/analysis , Cattle/physiology , Feces/chemistry , Spectroscopy, Near-Infrared/veterinary , Animal Nutritional Physiological Phenomena , Animals , Diet/veterinary , Eating , Feeding Behavior , Male , Nutritional Status
7.
J Anim Sci ; 94(8): 3370-3381, 2016 Aug.
Article in English | MEDLINE | ID: mdl-27695794

ABSTRACT

The objective of this study was to assess the nutritional value of barley grain differing in diastatic power (DP; high vs. low; a malt trait) and processing index (PI; 75 vs. 85). One hundred sixty Angus × Hereford crossbred yearling steers (467 ± 38 kg; 144 intact and 16 rumen cannulated) were used in a complete randomized 2 × 2 factorial experiment. Steers were assigned to 16 pens, 8 of which were equipped with the GrowSafe system to measure individual feed intake. Cannulated steers (2 per pen) were randomly assigned to the 8 GrowSafe pens. Diets consisted of high- or low-DP barley grain (80.0% of diet DM) processed to an index of either 75 or 85% (PI-75 and PI-85, respectively). Ruminal pH in cannulated steers was measured over four 5-d periods using indwelling electrodes. Fecal samples were collected every 28 d from the rectum of each steer to assess digestibility using AIA as a marker. No differences ( > 0.10) in rumen pH were observed among cattle as measured by the indwelling pH meters. However, lower ( < 0.05) rumen pH was observed for steers fed low- as opposed to high-DP barley in rumen samples collected just prior to feeding and measured in the laboratory. Intake of DM and OM were not affected ( ≥ 0.24) by DP but were lower ( < 0.01) with more severe processing (PI-75 vs. PI-85). Low-DP barley tended to exhibit higher ( = 0.09) total tract DM digestibility than high-DP barley. Steers fed PI-75 barley also had higher ( = 0.06) G:F and NEg. Digestibility of DM, OM, CP, NDF, and starch was higher ( < 0.05) for PI-75 barley than for PI-85 barley. Low-DP barley increased ( < 0.05) carcass dressing percentage by 0.5% compared with high-DP barley, with a lower PI tending to increase ( = 0.06) rib eye area. Compared with steers fed high-DP diets, steers fed low-DP diets had more ( = 0.01) total (41.7 vs. 19.4%) and severe liver abscesses (22.2 vs. 9.7%). Results suggest that although low-DP barley increased liver abscesses, differences in DP did not alter digestion or growth performance but low-DP barley did improve dressing percentage. Barley with different DP responded similarly to processing, with more intensive processing (PI-75) of barley improving starch digestion, feed efficiency, and NEg without negatively affecting rumen pH.


Subject(s)
Animal Feed/analysis , Cattle/physiology , Hordeum , Nutritive Value , Animal Nutritional Physiological Phenomena , Animals , Diet/veterinary , Digestion/drug effects , Feces , Feeding Behavior , Hydrogen-Ion Concentration , Male , Rumen
8.
J Environ Manage ; 167: 85-98, 2016 Feb 01.
Article in English | MEDLINE | ID: mdl-26613354

ABSTRACT

A 2-D hydrodynamic finite element model with a Lagrangian particle module is used to investigate the effects of dredging on the hydrodynamics and the horizontal dilution of pollutant particles originating from a wastewater treatment facility (WWTF) in tidal Oyster River in New Hampshire, USA. The model is driven by the semi-diurnal (M2) tidal component and includes the effect of flooding and drying of riverine mud flats. The particle tracking method consists of tidal advection plus a horizontal random walk model of sub-grid scale turbulent processes. Our approach is to perform continuous pollutant particle releases from the outfall, simulating three different scenarios: a base-case representing the present conditions and two different dredged channel/outfall location configurations. Hydrodynamics are investigated in an Eulerian framework and Lagrangian particle dilution improvement ratios are calculated for all cases. Results show that the simulated hydrodynamics are consistent with observed conditions. Eulerian and Lagrangian residuals predict an outward path suggesting flushing of pollutants on longer (>M2) time scales. Simulated dilution maps show that, in addition to dredging, the relocation of the WWTF outfall into the dredged main channel is required for increased dilution performance. The methodology presented here can be applied to similar managerial problems in all similar systems worldwide with relatively little effort, with the combination of Lagrangian and Eulerian methods working together towards a better solution. The statistical significance brought into methodology, by using a large number of particles (16000 in this case), is to be emphasized, especially with the growing number of networked parallel computer clusters worldwide. This paper improves on the study presented in Bilgili et al., 2006b, by adding an Eulerian analysis.


Subject(s)
Models, Theoretical , Rivers , Waste Disposal, Fluid , Water Pollution/analysis , Computer Simulation , Floods , Hydrodynamics , Hydrology/methods , New Hampshire
9.
J Anim Sci ; 93(10): 4852-9, 2015 Oct.
Article in English | MEDLINE | ID: mdl-26523578

ABSTRACT

Our objective was to develop a model to predict the acidosis potential of barley based on the in vitro batch culture incubation of 50 samples varying in bulk density, starch content, processing method, growing location, and agronomic practices. The model was an adaptation of the acidosis index (calculated from a combination of in situ and in vitro analyses and from several components of grain chemical composition) developed in Australia for use in the feed industry to estimate the potential for grains to increase the risk of ruminal acidosis. Of the independent variables considered, DM disappearance at 6 h of incubation (DMD6) using reduced-strength (20%) buffer in the batch culture accounted for 90.5% of the variation in the acidosis index with a root mean square error (RMSE) of 4.46%. To evaluate our model using independent datasets (derived from previous batch culture studies using full-strength [100%] buffer), we performed another batch culture study using full-strength buffer. The full-strength buffer model using in vitro DMD6 (DMD6-FS) accounted for 66.5% of the variation in the acidosis index with an RMSE of 8.30%. When the new full-strength buffer model was applied to 3 independent datasets to predict acidosis, it accounted for 20.1, 28.5, and 30.2% of the variation in the calculated acidosis index. Significant ( < 0.001) mean bias was evident in 2 of the datasets, for which the DMD6 model underpredicted the acidosis index by 46.9 and 5.73%. Ranking of samples from the most diverse independent dataset using the DMD6-FS model and the Black (2008) model (calculated using in situ starch degradation) indicated the relationship between the rankings using Spearman's rank correlation was negative (ρ = -0.30; = 0.059). When the reduced-strength buffer model was used, however, there were similarities in the acidosis index ranking of barley samples by the models as shown by the result of a correlation analysis between calculated (using the Australian model) and predicted (using the reduced-strength buffer DMD6 model) acidosis index (ρ = 0.67; < 0.001). Results suggest that our model, which is based on a reduced-strength buffer in vitro DMD6, has the potential to predict acidosis risk and can rank barley samples based on their acidotic risk. Nonetheless, the model would benefit from further refinement by expanding the database.


Subject(s)
Animal Feed/analysis , Cattle Diseases/etiology , Diet/veterinary , Hordeum , Models, Biological , Acidosis/veterinary , Animal Nutritional Physiological Phenomena , Animals , Cattle , Hydrogen-Ion Concentration , Rumen/metabolism , Starch/metabolism
10.
J Anim Sci ; 92(10): 4531-9, 2014 Oct.
Article in English | MEDLINE | ID: mdl-25186953

ABSTRACT

Digestibility of ether extract (EE) or fatty acids (FA) is traditionally measured by chemical analyses for EE or GLC methods for FA combined with marker concentration in diet and digesta or feces. Digestibility of EE or FA may be predicted by marker concentrations and spectral analyses of diet and digesta or feces. On the basis of Beer's law, a noncalibration spectroscopic method, which used functional group digestibility (FGD) determined with marker concentration and peak intensity of spectra of diets and undigested residues (digesta or feces), was developed to predict the apparent ileal digestibility (AID) of total FA and apparent total tract digestibility (ATTD) of EE. To validate, 4 diets containing 30% flaxseed and field pea coextruded with 4 extruder treatments and a wheat and soybean basal diet with predetermined AID of total FA and ATTD of EE were used. Samples of ingredients, diets, and freeze-dried digesta and feces were scanned on a Fourier transform infrared (FT-IR) instrument with a single-reflection attenuated total reflection (ATR) accessory. The intensity of either the methylene (CH2) antisymmetric stretching peak at 2,923 cm(-1) (R(2) = 0.90, P < 0.01) or the symmetric stretching peak at 2,852 cm(-1) (R(2) = 0.86, P < 0.01) of ingredients, diet, and digesta spectra was related strongly to the concentration of total FA. The AID of total FA of diets measured using GLC was predicted by the spectroscopic method using FGD at 2,923 and 2,852 cm(-1) (R(2) = 0.75, P < 0.01) with a bias of 0.54 (SD = 3.78%) and -1.35 (SD = 3.74%), respectively. The accumulated peak intensity in the region between 1,766 and 1,695 cm(-1) of spectra was related to EE concentration in ingredients and diets (R(2) = 0.61, P = 0.01) and feces (R(2) = 0.88, P < 0.01). The relation was improved by using second-derivative spectra of the sum of peak intensities at 1,743 and 1,710 cm(-1) for ingredients and diets (R(2) = 0.90, P = 0.01) and at 1,735 and 1,710 cm(-1) for feces (R(2) = 0.92, P < 0.01). The ATTD of EE of test diets determined with proximate analysis was estimated by the FGD of nonderivative spectra with or without baseline (R(2) = 0.90, P < 0.01) with a bias of 3.15 (SD = 3.14%) and 3.50 (SD = 3.24%), respectively. In conclusion, instead of using GLC methods or predictions based on calibrations, the AID of total FA and ATTD of EE can also be estimated directly from ATR FT-IR spectra, provided the ratio of marker in the diet and undigested residue is known.


Subject(s)
Animal Feed/analysis , Diet/veterinary , Digestion/physiology , Plant Extracts/chemistry , Spectroscopy, Fourier Transform Infrared/methods , Sus scrofa/physiology , Animals , Catheters/veterinary , Ether , Fatty Acids/analysis , Fatty Acids/metabolism , Feces/chemistry , Flax/chemistry , Ileum/physiology , Pisum sativum/chemistry , Plant Extracts/metabolism , Glycine max/chemistry , Swine , Triticum/chemistry
11.
Cell Death Dis ; 4: e683, 2013 Jun 20.
Article in English | MEDLINE | ID: mdl-23788040

ABSTRACT

B-cell lymphoma 2 (Bcl-2)-associated X protein (Bax) is a member of the Bcl-2 protein family having a pivotal role in triggering cell commitment to apoptosis. Bax is latent and monomeric in the cytosol but transforms into its lethal, mitochondria-embedded oligomeric form in response to cell stress, leading to the release of apoptogenic factors such as cytochrome C. Here, we dissected the structural correlates of Bax membrane insertion while oligomerization is halted. This strategy was enabled through the use of nanometer-scale phospholipid bilayer islands (nanodiscs) the size of which restricts the reconstituted system to single Bax-molecule activity. Using this minimal reconstituted system, we captured structural correlates that precede Bax homo-oligomerization elucidating previously inaccessible steps of the core molecular mechanism by which Bcl-2 family proteins regulate membrane permeabilization. We observe that, in the presence of BH3 interacting domain death agonist (Bid) BH3 peptide, Bax monomers induce the formation of ~3.5-nm diameter pores and significantly distort the phospholipid bilayer. These pores are compatible with promoting release of ions as well as proteinaceous components, suggesting that membrane-integrated Bax monomers in the presence of Bid BH3 peptides are key functional units for the activation of the cell demolition machinery.


Subject(s)
Lipid Bilayers/chemistry , bcl-2-Associated X Protein/chemistry , 1,2-Dipalmitoylphosphatidylcholine/chemistry , BH3 Interacting Domain Death Agonist Protein/chemistry , Cell Membrane Permeability , Cryoelectron Microscopy , Humans , Nanostructures/chemistry , Nanostructures/ultrastructure , Peptide Fragments/chemistry , Porosity , Protein Structure, Quaternary , bcl-2-Associated X Protein/ultrastructure
12.
J Anim Sci ; 90 Suppl 4: 251-3, 2012 Dec.
Article in English | MEDLINE | ID: mdl-23365346

ABSTRACT

In vitro methods did not accurately predict in vivo apparent total tract digestibility of energy for canola coproducts (r = -0.81; P = 0.002). We scanned 153 samples of digesta, feces, and in vitro digestion residues (ivR) on a Fourier transform midinfrared instrument with a single-reflection attenuated total reflectance attachment. The second derivative spectral net intensities of the carbonyl ester peak at 1745 cm(-1) and olefinic hydrocarbon (=C-H) peak at 3008 cm(-1) were both higher in ivR than in feces (3.83 × 10(-04) vs. 3.46 × 10(-05) and 7.92 × 10(-05) vs. 5.17 × 10(-06), respectively; P < 0.001), indicating poor enzymatic digestion of unsaturated fat. In conclusion, fat digestion of in vitro procedure for canola coproducts requires improvement to adequately mimic in vivo digestion in pigs.


Subject(s)
Brassica/chemistry , Dietary Fats/metabolism , Digestion/physiology , Gastrointestinal Contents/chemistry , Spectroscopy, Fourier Transform Infrared/veterinary , Swine/physiology , Animal Feed/analysis , Animal Nutritional Physiological Phenomena , Animals , Diet/veterinary , Energy Intake , Feces/chemistry
13.
J Anim Sci ; 90 Suppl 4: 415-7, 2012 Dec.
Article in English | MEDLINE | ID: mdl-23365397

ABSTRACT

The CP digestibility is traditionally measured by chemical analyses of CP and marker concentration in digesta and diets. Potentially, CP digestibility can also be predicted by marker concentrations and spectral analyses of digesta and diet. Spectroscopy is a rapid, nondestructive method to ascertain qualitative and quantitative chemical information. Based on Beer's law, a spectroscopic method was developed to predict in vivo CP digestibility. To validate, samples of digesta and diet of wheat grain with predetermined apparent ileal digestibility (AID) of CP were scanned on a Fourier transform midinfrared (FTIR) instrument with a single-reflection attenuated total reflectance attachment. The AID of CP was calculated from peak intensities of spectra and measured marker concentrations in digesta and diet and then compared with in vivo AID of CP. The AID of CP of a wheat-based diet was predicted accurately with a deviation of 0.68 ± 0.86% from in vivo AID of CP ranging from 60.4 to 87.8%. Functional group digestibility based on the peak at 1,643 cm(-1) or the Amide I region was strongly correlated (r ≥ 0.99; P < 0.001) with in vivo AID of CP. In conclusion, instead of predictions based on calibrations, CP digestibility can also be potentially predicted directly from FTIR spectra.


Subject(s)
Animal Feed/analysis , Digestion/physiology , Plant Proteins/chemistry , Spectroscopy, Fourier Transform Infrared/veterinary , Swine/physiology , Triticum/chemistry , Animals , Chromium Compounds , Gastrointestinal Contents/chemistry , Plant Proteins/metabolism , Spectroscopy, Fourier Transform Infrared/instrumentation , Spectroscopy, Fourier Transform Infrared/methods
14.
J Biomed Inform ; 43(5 Suppl): S13-S16, 2010 Oct.
Article in English | MEDLINE | ID: mdl-20937478

ABSTRACT

We describe design and prototyping efforts for a Personal Health Management Assistant for heart failure patients as part of Project HealthDesign. An assistant is more than simply an application. An assistant understands what its users need to do, interacts naturally with them, reacts to what they say and do, and is proactive in helping them manage their health. In this project, we focused on heart failure, which is not only a prevalent and economically significant disease, but also one that is very amenable to self-care. Working with patients, and building on our prior experience with conversational assistants, we designed and developed a prototype system that helps heart failure patients record objective and subjective observations using spoken natural language conversation. Our experience suggests that it is feasible to build such systems and that patients would use them. The system is designed to support rapid application to other self-care settings.


Subject(s)
Decision Support Systems, Clinical , Patient Care Management/methods , Personal Health Services/methods , Telemedicine/methods , User-Computer Interface , Health Records, Personal , Heart Failure/therapy , Humans , Internet , Natural Language Processing , Self Care , Speech Recognition Software
15.
Philos Trans R Soc Lond B Biol Sci ; 363(1492): 685-701, 2008 Feb 27.
Article in English | MEDLINE | ID: mdl-17785275

ABSTRACT

Soil health is presented as an integrative property that reflects the capacity of soil to respond to agricultural intervention, so that it continues to support both the agricultural production and the provision of other ecosystem services. The major challenge within sustainable soil management is to conserve ecosystem service delivery while optimizing agricultural yields. It is proposed that soil health is dependent on the maintenance of four major functions: carbon transformations; nutrient cycles; soil structure maintenance; and the regulation of pests and diseases. Each of these functions is manifested as an aggregate of a variety of biological processes provided by a diversity of interacting soil organisms under the influence of the abiotic soil environment. Analysis of current models of the soil community under the impact of agricultural interventions (particularly those entailing substitution of biological processes with fossil fuel-derived energy or inputs) confirms the highly integrative pattern of interactions within each of these functions and leads to the conclusion that measurement of individual groups of organisms, processes or soil properties does not suffice to indicate the state of the soil health. A further conclusion is that quantifying the flow of energy and carbon between functions is an essential but non-trivial task for the assessment and management of soil health.


Subject(s)
Agriculture/methods , Conservation of Natural Resources , Ecosystem , Soil Microbiology , Soil/analysis , Soil/standards , Animals , Arthropods/physiology , Carbon/metabolism , Crops, Agricultural , Forestry
16.
J Dairy Sci ; 90(11): 5176-88, 2007 Nov.
Article in English | MEDLINE | ID: mdl-17954758

ABSTRACT

One hundred primiparous and multiparous Holstein cows were used in an experiment to evaluate the effect of supplementing diets with either a plant- or an animal-based source of rumen-undegradable protein (RUP), with or without AA supplementation, during the transition period and early lactation on milk production response. The experimental design was a randomized block design with approximately one-third of the cows being primiparous. Cows were assigned to 1 of 4 prepartum diets introduced 3 wk before the expected calving date and switched to the corresponding postpartum diet at calving. Diets 1 (AMI) and 2 (AMI+) included a vegetable RUP source (heat- and lignosulfonate-treated canola meal), with diet 2 containing supplemental Lys x HCl and Met hydroxy analog sources [D,L-2 hydroxy-4-(methylthio)-butanoic acid; Alimet feed supplement]. Diets 3 (PRO) and 4 (PRO+) consisted of a blend of animal RUP sources (blood meal, fish meal, feather meal, and porcine meat and bone meal), with diet 4 containing supplemental Lys x HCl and Met hydroxy analog sources [D,L-2 hydroxy-4-(methylthio)-butanoic acid; Alimet]. During the first 4 wk of lactation, dry matter intake was less when synthetic Lys x HCl and Alimet were supplemented, but this effect was no longer evident in wk 5 to 9 of the experiment. Interestingly, despite the initial decrease in dry matter intake in the cows fed AA-supplemented diets, there was no effect of treatment on milk production or the ratio of fat-corrected milk to dry matter intake throughout the 17 wk of the study. Undegradable protein source (vegetable vs. animal) did not affect dry matter intake, milk production, or 3.5% fat-corrected milk production for the first 17 wk of lactation. The results of this study indicate that heat- and lignosulfonate-treated canola meal can be used as a source of undegradable protein in place of high-quality rumen-undegradable animal protein sources without negative effects on milk production when diets are equivalent in rumen degradable protein, RUP, and metabolizable Met and Lys. Despite other reports citing clear benefits to feeding supplemental synthetic Lys or Met in diets fed to high-producing lactating dairy cows, we were unable to provide additional evidence to support these findings. Additionally, there was a trend for whole-blood Lys concentrations to be greater for diets supplemented with Lys x HCl.


Subject(s)
Cattle/physiology , Dietary Proteins/metabolism , Dietary Supplements , Lactation/drug effects , Lysine/pharmacology , Methionine/analogs & derivatives , Rumen/metabolism , Allantoin/analysis , Amino Acids/blood , Animal Feed/analysis , Animals , Body Weight , Diet/veterinary , Dietary Proteins/administration & dosage , Eating/drug effects , Fatty Acids/analysis , Female , Lactation/physiology , Lysine/administration & dosage , Lysine/metabolism , Methionine/administration & dosage , Methionine/pharmacology , Milk/chemistry , Milk/metabolism , Nitrogen/analysis , Pregnancy , Time Factors
17.
Oncogene ; 26(48): 6954-8, 2007 Oct 18.
Article in English | MEDLINE | ID: mdl-17486059

ABSTRACT

Damage-induced G1 checkpoint in mammalian cells involves upregulation of p53, which activates transcription of p21(Waf1) (CDKN1A). Inhibition of cyclin-dependent kinase (CDK)2 and CDK4/6 by p21 leads to dephosphorylation and activation of Rb. We now show that ectopic p21 expression in human HT1080 fibrosarcoma cells causes not only dephosphorylation but also depletion of Rb; this effect was p53-independent and susceptible to a proteasome inhibitor. CDK inhibitor p27 (CDKN1B) also caused Rb dephosphorylation and depletion, but another CDK inhibitor p16 (CDKN2A) induced only dephosphorylation but not depletion of Rb. Rb depletion was observed in both HT1080 and HCT116 colon carcinoma cells, where p21 was induced by DNA-damaging agents. Rb depletion after DNA damage did not occur in the absence of p21, and it was reduced when p21 induction was inhibited by p21-targeting short hairpin RNA or by a transdominant inhibitor of p53. These results indicate that p21 both activates Rb through dephosphorylation and inactivates it through degradation, suggesting negative feedback regulation of damage-induced cell-cycle checkpoint arrest.


Subject(s)
Colonic Neoplasms/metabolism , Cyclin-Dependent Kinase Inhibitor p21/metabolism , Cyclin-Dependent Kinase Inhibitor p27/metabolism , Fibrosarcoma/metabolism , Retinoblastoma Protein/metabolism , Antibiotics, Antineoplastic/pharmacology , Colonic Neoplasms/pathology , Cyclin-Dependent Kinase Inhibitor p16/metabolism , DNA Damage/drug effects , Doxorubicin/pharmacology , Fibrosarcoma/pathology , Humans , Immunoblotting , Phosphorylation/drug effects , Tumor Cells, Cultured/drug effects , Tumor Cells, Cultured/metabolism , Tumor Suppressor Protein p53/metabolism
18.
J Dairy Sci ; 90(2): 1063-72, 2007 Feb.
Article in English | MEDLINE | ID: mdl-17235186

ABSTRACT

This study investigated the feasibility of altering the dietary cation-anion difference (DCAD) in grass by altering the grass variety and the amount and formulation of K fertilizer application. In experiment 1, treatments were combinations of 2 varieties (Barcel and Hi-Mag) of tall fescue (Festuca arundinacea Schreb); 2 rates of K (0 and 250 kg/ha), supplied as KCl; and 2 rates of Mg (0 and 60 kg/ha), supplied as MgO. In experiment 2, K fertilizer was applied at 0 or 125 kg/ha as KCl or K2SO4. There was no difference between HiMag and Barcel tall fescue in the concentrations of Mg, S, and Cl. Application of K fertilizer decreased concentrations of Mg, but the magnitude of the decrease was not consistent across harvests. Conversely, application of Mg fertilizer increased Mg concentrations, but again, the magnitude of the increase was not consistent across harvests. The concentrations of Ca were higher in HiMag than in Barcel tall fescue, with the magnitude of the difference increasing from first to last harvest. Potassium fertilizer decreased Ca concentrations in the first, fourth, and fifth harvests only. Calcium concentration was decreased by a greater magnitude in HiMag tall fescue as a result of Mg fertilization. The HiMag tall fescue contained lower concentrations of K than did Barcel tall fescue in the first, second, and third harvests. Application of K fertilizer increased the K concentration in all 5 harvests but did not affect Na concentrations except in the last harvest. The HiMag tall fescue contained less Na than did Barcel, but the magnitude of the difference was affected by K and Mg fertilization. Application of K fertilizer decreased S concentrations in first-harvest grass, increased concentrations in second-and third-harvest grasses, and had no effect in fourth-or fifth-harvest grasses. Application of Mg fertilizer decreased S concentrations of tall fescue. Application of K fertilizer increased DCAD values for grass harvested from the second through fifth harvests. The increase in DCAD attributable to K fertilizer was less in HiMag than in Barcel tall fescue. Application of K fertilizer as K2SO4 increased dry matter yield and S concentrations of HiMag tall fescue, whereas K applied as KCl increased concentrations of K and Cl. There was no effect of fertilizer formulation on Na concentrations. The DCAD was lower in HiMag tall fescue fertilized with K2SO4 compared with that fertilized with KCl. This study showed that DCAD of grass can be manipulated by the choice of grass variety, fertilizer formulation, and fertilizer application rate.


Subject(s)
Anions/analysis , Cations/analysis , Fertilizers , Festuca/chemistry , Minerals/analysis , Potassium/administration & dosage , Animal Feed/analysis , Animals , Calcium/analysis , Chlorides/analysis , Diet , Festuca/growth & development , Magnesium/administration & dosage , Magnesium/analysis , Potassium/analysis , Potassium Chloride/administration & dosage , Sodium/analysis , Sulfates/administration & dosage
19.
Eur Phys J E Soft Matter ; 22(3): 219-26, 2007 Mar.
Article in English | MEDLINE | ID: mdl-17225933

ABSTRACT

When a bed of fluid-immersed fine grains is exposed to vertical vibration a wealth of phenomena may be observed. At low frequencies a horizontal bed geometry is generally unstable and the bed breaks spatial symmetry, acquiring a tilt. At the same time it undergoes asymmetric granular convection. Fine binary mixtures may separate completely into layers or patterns of stripes. The separated regions may exhibit instabilities in which they undergo wave-like motion or exhibit quasi-periodic oscillations. We briefly review these and a number of related behaviours, identifying the physical mechanisms behind each. Finally, we discuss the magneto-vibratory separation of binary mixtures which results from exposing each component to a different effective gravity and describe the influence of a background fluid on this process.

20.
Mol Psychiatry ; 10(8): 799-803, 2005 Aug.
Article in English | MEDLINE | ID: mdl-15852062

ABSTRACT

Genetic predisposition plays an important role in most common psychiatric disorders. The identification of a specific gene associated with a psychiatric illness can lead to improved management of the gene-associated disorder. Mutations in the wolframin gene are associated with mental illness. Many patients with the Wolfram syndrome (WS), who are homozygous or compound heterozygous for wolframin mutations, have severe psychiatric symptoms. In WS families, close blood relatives, who have a high probability of carrying a single wolframin mutation, had a statistically significant excess, over spouse controls, of psychiatric hospitalizations, attempted and completed suicides, and self-reports of mental illness. Since heterozygous carriers of wolframin mutations are relatively frequent in the population according to the general Hardy-Weinberg principle, such mutations might be responsible for the illnesses of many psychiatric patients. The hypothesis that heterozygous carriers of a wolframin mutation are predisposed to psychiatric illness was tested in subjects from 25 WS families. In all, 11 relatives who had psychiatric hospitalizations could be genotyped through mutation analysis. Eight of these carried the wolframin mutation transmitted in their family, significantly (one-sided P=0.0022) more than the 3.0 expected if there were no association between psychiatric hospitalizations and mutations at this locus. All eight mutation-positive subjects had been hospitalized for a major depression. This confirmation of the association is not influenced by confounders, undetected stratification, or genetic heterogeneity. The relative risk of psychiatric hospitalization for depression was estimated to be 7.1 (95% CI 1.9-26.6) for carriers of a single wolframin mutation compared to noncarriers.


Subject(s)
Membrane Proteins/genetics , Mental Disorders/genetics , Mutation , Polymorphism, Single Nucleotide , Wolfram Syndrome/genetics , Female , Heterozygote , Homozygote , Humans , Male , Pedigree
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