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1.
AIDS Behav ; 23(12): 3277-3285, 2019 Dec.
Article in English | MEDLINE | ID: mdl-30778809

ABSTRACT

We evaluated characteristics associated with recent HIV infection among persons who inject drugs (PWID) from 19 U.S. cities who participated in 2012 National HIV Behavioral Surveillance. Recent infection was defined as having a reactive HIV test, a Bio-Rad Avidity index cutoff ≤ 30%, no reported HIV diagnosis ≥ 12 months before interview, and no evidence of viral suppression. Of 8667 PWID, 50 (0.6%) were recently HIV infected. Having a greater number of sex partners (≥ 2 partners vs. 0) [prevalence ratio (PR) 4.7, 95% confidence interval (CI) 1.3-17.8], injecting heroin and other drugs (PR 3.0, 95% CI 1.3-6.6) or exclusively non-heroin drugs (PR 5.9, 95% CI 1.7-20.7) compared to injecting only heroin, and having male-male sex in the past year (PR 7.1, 95% CI 3.0-16.6) were associated with recent infection. Promoting not only safe injection practices but also safe sex practices will be key to preventing new HIV infections.


Subject(s)
HIV Infections/diagnosis , HIV Infections/epidemiology , Mass Screening/psychology , Risk-Taking , Substance Abuse, Intravenous/complications , Adolescent , Adult , Behavioral Risk Factor Surveillance System , Cities/epidemiology , Cross-Sectional Studies , Female , HIV Infections/psychology , Humans , Incidence , Male , Prevalence , Sexual Partners , Substance Abuse, Intravenous/epidemiology , United States/epidemiology , Young Adult
2.
J Clin Microbiol ; 42(11): 5161-9, 2004 Nov.
Article in English | MEDLINE | ID: mdl-15528710

ABSTRACT

Infections with human immunodeficiency virus types 1 and 2 (HIV-1 and HIV-2, respectively) are zoonotic infections. In Africa, the potential exists for additional cross-species transmissions from at least 33 different species of simian immunodeficiency virus (SIV)-infected nonhuman primates (NHPs) through hunting and butchering of these animals for food. Here we describe a highly sensitive and specific enzyme immunoassay (EIA) with chemically modified, multiple antigenic peptides (MAPs) developed for the detection and discrimination of antibodies to SIV genetic lineages. The SIV EIA was developed by using a comprehensive array of MAPs covering two envelope gene regions from all of the SIV lineages for which env sequences were available. Assay sensitivity was evaluated by using 63 plasma or serum samples obtained from primates naturally or experimentally infected with SIVs from 10 genetic lineages. Assay specificity was determined by using 97 known SIV-negative plasma specimens from these same species. Also used in the evaluations were 369 human samples: 198 HIV seronegative, 170 HIV-1 and/or HIV-2 seropositive, and 1 from a human SIVsm infection. Overall assay sensitivity and specificity were 100% with both immunodominant region (IDR) and V3 region MAPs. Although SIV env sequences from talapoin monkeys were not available for specific MAP inclusion, 5 (100%) of 5 SIVtal-infected samples were detected through cross-reactivity with other SIV IDR MAPs used in the assay. The one human SIVsm infection was identified. In conclusion, our SIV MAP EIA proved to be highly sensitive and specific for detecting SIV infections in NHPs and humans. As shown with SIV-infected talapoin monkeys, this assay has the potential to detect previously unidentified SIV strains and should be suitable for sentinel surveillance for potential new cross-species transmissions of SIVs to humans.


Subject(s)
Antigens, Viral/immunology , Immunoenzyme Techniques/methods , Peptides/immunology , Simian Acquired Immunodeficiency Syndrome/diagnosis , Simian Immunodeficiency Virus/immunology , Amino Acid Sequence , Animals , Antigens, Viral/chemistry , HIV Envelope Protein gp120/chemistry , HIV Envelope Protein gp120/immunology , HIV Seropositivity/diagnosis , Haplorhini , Humans , Immunodominant Epitopes/chemistry , Immunodominant Epitopes/immunology , Molecular Sequence Data , Peptide Fragments/chemistry , Peptide Fragments/immunology , Peptides/chemistry , Sensitivity and Specificity
3.
J Gen Virol ; 84(Pt 10): 2723-2727, 2003 Oct.
Article in English | MEDLINE | ID: mdl-13679606

ABSTRACT

We present here a novel, distinct simian T-cell lymphotropic virus (STLV) found in a red-capped mangabey (Cercocebus torquatus) (CTO-NG409), wild-caught in Nigeria, that showed an HTLV-2-like Western blot (WB) seroreactivity. The complete genome (8920 bp) of CTO-NG409 STLV was related to but different from STLV-3/PHA-PH969 (13.5 %) and STLV-3/PPA-F3 (7.6 %), and STLV-3/CTO604 (11.3 %), found in Eritrean and Senegalese baboons, and red-capped mangabeys from Cameroon, respectively. Phylogenetic analysis of a conserved tax (180 bp) sequence and the env gene (1482 bp) confirmed the relatedness of STLV-3/CTO-NG409 to the STLV-3 subgroup. Molecular clock analysis of env estimated that STLV-3/CTO-NG409 diverged from East and West/Central African STLV-3s about 140,900+/-12,400 years ago, suggesting an ancient African origin of STLV-3. Since phylogenetic evidence suggests multiple interspecies transmissions of STLV-1 to humans, and given the antiquity and wide distribution of STLV-3 in Africa, a search for STLV-3 in human African populations with HTLV-2-like WB patterns is warranted.


Subject(s)
Cercocebus/virology , Deltaretrovirus Infections/veterinary , Monkey Diseases/virology , Primate T-lymphotropic virus 3/classification , Animals , Animals, Wild/virology , Antibodies, Viral/blood , Antibodies, Viral/immunology , Deltaretrovirus Infections/virology , Evolution, Molecular , Molecular Sequence Data , Nigeria , Phylogeny , Primate T-lymphotropic virus 3/genetics , Primate T-lymphotropic virus 3/isolation & purification , Sequence Analysis, DNA
4.
Transfusion ; 42(7): 886-91, 2002 Jul.
Article in English | MEDLINE | ID: mdl-12375661

ABSTRACT

BACKGROUND: Infections with simian foamy virus (SFV) are widely prevalent in nonhuman primates. SFV infection was confirmed in a worker, occupationally exposed to nonhuman primates, who donated blood after the retrospectively documented date of infection. Human-to-human transmission of SFV through transfusion and its pathogenicity have not been studied. STUDY DESIGN AND METHODS: Recipients of blood from this donor were identified and blood samples from such recipients were tested for SFV infection by Western blot and PCR assay. RESULTS: One recipient of RBCs and another recipient of FFP had died; retroviral infections were not implicated. One platelet recipient could not be tested. Recipients of RBCs (two), a WBC-reduced RBC unit (one), and a platelet unit (one) tested SFV-negative 19 months to 7 years after transfusion. Tested recipients had transfusions 3 to 35 days after blood donation. Samples of one lot of albumin and three lots of plasma protein fraction (manufactured from recovered plasma from two donations) tested negative both for antibodies and for viral RNA. CONCLUSION: SFV transmission through transfusion was not identified among four recipients of cellular blood components from one SFV-infected donor. Derivatives containing plasma from that donor tested negative for SFV.


Subject(s)
Blood Donors , Retroviridae Infections/blood , Retroviridae Infections/transmission , Spumavirus , Adult , Aged , Animals , Antibodies, Viral/blood , Blood Component Transfusion/adverse effects , Blotting, Western , Child, Preschool , DNA, Viral/analysis , Humans , Middle Aged , Pan troglodytes , Polymerase Chain Reaction , Proviruses/genetics , Retrospective Studies , Retroviridae Infections/diagnosis , Spumavirus/genetics , Spumavirus/immunology
5.
Transplantation ; 71(7): 959-65, 2001 Apr 15.
Article in English | MEDLINE | ID: mdl-11349732

ABSTRACT

BACKGROUND: Nonhuman primates (NHPs) have been widely used in different porcine xenograft procedures inevitably resulting in exposure to porcine endogenous retrovirus (PERV). Surveillance for PERV infection in these NHPs may provide information on the risks of cross-species transmission of PERV, particularly for recipients of vascularized organ xenografts for whom data from human clinical trials is unavailable. METHODS: We tested 21 Old World and 2 New World primates exposed to a variety of porcine xenografts for evidence of PERV infection. These NHPs included six baboon recipients of pig hearts, six bonnet macaque recipients of transgenic pig skin grafts, and nine rhesus macaque and two capuchin recipients of encapsulated pig islet cells. Serologic screening for PERV antibody was done by a validated Western blot assay, and molecular detection of PERV sequences in peripheral blood mononuclear cells (PBMCs) and plasma was performed using sensitive polymerase chain reaction and reverse transcriptase-polymerase chain reaction assays, respectively. Spleen and lymph node tissues available from six bonnet macaques and three rhesus macaques were also tested for PERV sequences. RESULTS: All plasma samples were negative for PERV RNA suggesting the absence of viremia in these xenografted animals. Similarly, PERV sequences were not detectable in any PBMC and tissue samples, arguing for the lack of latent infection of these compartments. In addition, all plasma samples were negative for PERV antibodies. CONCLUSION: These data suggest the absence of PERV infection in all 23 NHPs despite exposure to vascularized porcine organs or tissue xenografts and the use of immunosuppressive therapies in some animals. These findings suggest that PERV is not easily transmitted to these NHP species through these types of xenografts.


Subject(s)
Cebidae/virology , Cell Transplantation/adverse effects , Cercopithecidae/virology , Organ Transplantation/adverse effects , Retroviridae Infections/transmission , Swine Diseases/transmission , Transplantation, Heterologous/adverse effects , Animals , Cebus , Chimera , Islets of Langerhans/cytology , Macaca , Papio , RNA, Viral/analysis , Retroviridae/genetics , Retroviridae/immunology , Skin Transplantation/adverse effects , Swine/genetics , Swine/virology
6.
Emerg Infect Dis ; 7(1): 66-72, 2001.
Article in English | MEDLINE | ID: mdl-11266296

ABSTRACT

The identification of endogenous avian leukosis virus (ALV) and endogenous avian retrovirus (EAV) in chick cell-derived measles and mumps vaccines in current use has raised concern about transmission of these retroviruses to vaccine recipients. We used serologic and molecular methods to analyze specimens from 206 recipients of measles, mumps, and rubella (MMR) vaccine for evidence of infection with ALV and EAV. A Western blot assay for detecting antibodies to endogenous ALV was developed and validated. All serum samples were negative for antibodies to endogenous ALV by Western blot analysis. Peripheral blood lymphocyte samples from 100 vaccinees were further tested by polymerase chain reaction for both ALV and EAV proviral sequences; all were negative. Matching serum samples were tested by reverse transcriptase polymerase chain reaction for ALV and EAV RNA, and all 100 samples were negative, providing no evidence of viremia. These findings do not indicate the presence of either ALV or EAV infection in MMR vaccine recipients and provide support for current immunization policies.


Subject(s)
Avian Leukosis Virus/isolation & purification , Endogenous Retroviruses/isolation & purification , Measles-Mumps-Rubella Vaccine/adverse effects , Retroviridae Infections/transmission , Animals , Blotting, Western , Chickens , Child , Humans , Reverse Transcriptase Polymerase Chain Reaction
7.
J Virol ; 75(4): 1783-9, 2001 Feb.
Article in English | MEDLINE | ID: mdl-11160676

ABSTRACT

Simian type D retrovirus (SRV) is enzootic in many populations of Asian monkeys of the genus Macaca and is associated with immunodeficiency diseases. However, the zoonotic potential of this agent has not been well defined. Screening for antibodies to SRV was performed as part of an ongoing study looking for evidence of infection with simian retroviruses among persons occupationally exposed to nonhuman primates (NHPs). Of 231 persons tested, 2 (0.9%) were found to be strongly seropositive, showing reactivity against multiple SRV antigens representing gag, pol, and env gene products by Western immunoblotting. Persistent long-standing seropositivity, as well as neutralizing antibody specific to SRV type 2, was documented in one individual (subject 1), while waning antibody with eventual seroreversion was observed in a second (subject 2). Repeated attempts to detect SRV by isolation in tissue culture and by using sensitive PCR assays for amplification of two SRV gene regions (gag and pol) were negative. Both individuals remain apparently healthy. We were also unable to transmit this seropositivity to an SRV-negative macaque by using inoculation of whole blood from subject 1. The results of this study provide evidence that occupational exposure to NHPs may increase the risk of infection with SRV and underscore the importance of both occupational safety practices and efforts to eliminate this virus from established macaque colonies.


Subject(s)
Monkey Diseases/transmission , Occupational Exposure , Retroviridae Infections/transmission , Retroviruses, Simian/isolation & purification , Tumor Virus Infections/transmission , Zoonoses , Animals , Antibodies, Viral/blood , DNA, Viral/blood , Humans , Macaca mulatta , Monkey Diseases/virology , Neutralization Tests , Polymerase Chain Reaction , Retroviridae Infections/virology , Retroviruses, Simian/genetics , Retroviruses, Simian/immunology , Tumor Virus Infections/virology
8.
J Virol ; 75(6): 2771-5, 2001 Mar.
Article in English | MEDLINE | ID: mdl-11222700

ABSTRACT

In view of the concern over potential infection hazards in the use of porcine tissues and organs for xenotransplantation to humans, we investigated the diversity of porcine endogenous retrovirus (PERV) genomes in the DNA of domestic pigs and related species. In addition to the three known envelope subgroups of infectious gamma retroviruses (PERV-A, -B, and -C), classed together here as PERV group gamma 1, four novel groups of gamma retrovirus (gamma 2 to gamma 5) and four novel groups of beta retrovirus (beta 1 to beta 4) genomes were detected in pig DNA using generic and specific PCR primers. PCR quantification indicated that the retroviral genome copy number in the Landrace x Duroc F(1) hybrid pig ranged from 2 (beta 2 and gamma 5) to approximately 50 (gamma 1). The gamma 1, gamma 2, and beta 4 genomes were transcribed into RNA in adult kidney tissue. Apart from gamma 1, the retroviral genomes are not known to be infectious, and sequencing of a small number of amplified genome fragments revealed stop codons in putative open reading frames in several cases. Analysis of DNA from wild boar and other species of Old World pigs (Suidae) and New World peccaries (Tayassuidae) showed that one retrovirus group, beta 2, was common to all species tested, while the others were present among all Old World species but absent from New World species. The PERV-C subgroup of gamma1 genomes segregated among domestic pigs and were absent from two African species (red river hog and warthog). Thus domestic swine and their phylogenetic relatives harbor multiple groups of hitherto undescribed PERV genomes.


Subject(s)
Endogenous Retroviruses/classification , Endogenous Retroviruses/genetics , Genome, Viral , Swine/virology , Animals , DNA, Viral/analysis , DNA, Viral/genetics , Molecular Sequence Data , Polymerase Chain Reaction/methods , RNA, Viral/genetics , RNA, Viral/metabolism
9.
J Infect Dis ; 183(4): 648-52, 2001 Feb 15.
Article in English | MEDLINE | ID: mdl-11170992

ABSTRACT

Since 1984, unheated porcine clotting factor VIII (Hyate:C) has been used to treat severe bleeding episodes in persons with hemophilia who have antibodies to human clotting factor. We document the presence of porcine endogenous retrovirus (PERV) in plasma samples of pigs and in clinical lots of Hyate:C. Both gag and pol PERV RNA sequences were detected by reverse-transcriptase (RT) polymerase chain reaction in 13 of 13 lots of Hyate:C tested. Among 10 of these lots, RT activity also was detected, which confirms the presence of retroviral particles. To assess the transmission of PERV to Hyate:C recipients, we tested serum specimens from 88 recipients of Hyate:C and 23 noninfused control subjects for anti-PERV antibodies by using a Western blot assay. None of the samples was positive. Our data document that PERV particles are a common contaminant of Hyate:C products and suggest that the risk of PERV transmission from these percutaneous exposures is very low.


Subject(s)
Drug Contamination , Endogenous Retroviruses/isolation & purification , Factor VIII/adverse effects , Hemophilia A/therapy , Retroviridae Infections/transmission , Swine/virology , Animals , Antibodies, Viral/blood , Endogenous Retroviruses/classification , Endogenous Retroviruses/genetics , Endogenous Retroviruses/immunology , Hemophilia A/virology , Humans , Molecular Sequence Data , Plasma/virology , RNA, Viral/analysis , RNA, Viral/blood , Retroviridae Infections/veterinary , Retroviridae Infections/virology , Reverse Transcriptase Polymerase Chain Reaction , Swine Diseases/virology
10.
Virology ; 278(1): 194-206, 2000 Dec 05.
Article in English | MEDLINE | ID: mdl-11112494

ABSTRACT

A group of three rhesus macaques were inoculated with SIV isolated from a human (SIVhu) accidentally exposed and infected with SIVsm. Extensive sequence analyses of SIVhu obtained from the human and macaques following infection indicated the presence of truncated nef. Not only did nef fail to repair itself in vivo postinfection (p.i.), but instead, further mutations added additional stop codons with increasing time p.i. Infection of these animals was associated with minimal acute viral replication, followed by undetectable plasma viral loads and only intermittent PCR detection up to 5 years p.i. The three SIVhu infected and three control monkeys were then challenged with the heterologous highly pathogenic SHIV89.6p. All three controls became infected and showed rapid declines in peripheral CD4(+) lymphocytes, disease, and death at 10 and 32 weeks p.i., respectively. In contrast, all three animals previously infected with SIVhu are healthy and exhibit stable CD4(+) lymphocyte levels and undetectable plasma viral loads at >20 months post-SHIV89. 6p challenge. Only transient, low levels of SHIV replication were noted in these animals. Whereas responses to SIVgag/pol were noted, no evidence for SIV/SHIV envelope cross-reactivity was detected by antibody or CTL analyses, suggesting that the protective immune mechanisms to the heterologous challenge isolate were most likely not directed to envelope but rather to other viral determinants.


Subject(s)
HIV-2/pathogenicity , Reassortant Viruses/pathogenicity , Simian Acquired Immunodeficiency Syndrome/physiopathology , Simian Immunodeficiency Virus/pathogenicity , Animals , Antibodies, Viral/blood , CD4 Lymphocyte Count , Gene Products, nef/analysis , Genes, nef , HIV Infections/immunology , HIV Infections/physiopathology , HIV-2/genetics , HIV-2/immunology , Humans , Macaca mulatta , Open Reading Frames , Reassortant Viruses/genetics , Reassortant Viruses/immunology , Simian Acquired Immunodeficiency Syndrome/blood , Simian Acquired Immunodeficiency Syndrome/immunology , Simian Immunodeficiency Virus/genetics , Simian Immunodeficiency Virus/immunology , T-Lymphocytes, Cytotoxic/immunology , Viral Load , nef Gene Products, Human Immunodeficiency Virus
11.
J Acquir Immune Defic Syndr ; 24(3): 257-63, 2000 Jul 01.
Article in English | MEDLINE | ID: mdl-10969350

ABSTRACT

To explain the low transmissibility and pathogenicity of HIV-2 infection's plasma viral loads in both HIV-1- and HIV-2-infected persons were compared by using the polymerase chain reaction (PCR)-based Amp-RT assay to measure levels of reverse transcriptase (RT) activity. The study comprised a total of 155 HIV-infected-people including 58 who were infected with HIV-2 with CD4+ cell counts <500 x 106/L (n = 15), CD4+ cell counts >500 x 106/L (n = 26), or with tuberculosis (TB; n = 17), and 97 HIV-1-infected people with CD4+ cell counts <500 x 106/L (n = 32), CD4+ cell counts >500 x 106/L (n = 25), or TB (n = 40). Among persons with CD4+ cell counts <500 x 106/L, 11 (73.3%) of 15 HIV-2-infected persons had detectable plasma RT activity compared with 25 (78.1%) of 32 HIV-1-infected persons (p =.725). However, the median HIV-2 plasma RT activity in this group was significantly lower (2561 x 10-10 U/ml; p =.036; detectable range, 1712-644,868 x 10-10 U/ml) than the RT activity of HIV-1-infected persons with similar CD4+ cell counts (13,241 x 10-10 U/ml; detectable range, 8482-1,478,880 x 10-10 U/ml). Among TB patients, 10 (58.8%) of 17 HIV-2-infected persons had detectable plasma RT activity compared with 30 (75%) of 40 HIV-1-infected persons (p =.342). In contrast, among patients with CD4+ cell counts >500 x 106/L, none of 26 HIV-2-infected persons had detectable RT activity compared with 13 (52%) of 25 HIV-1-infected persons (p <.001). Our data suggest that unlike HIV-1 infection, HIV-2 infections with CD4+ cell counts >500 x 106/L are associated with a low level of viral replication, which may explain the longer clinical latency and lower transmissibility seen in HIV-2 infection.


Subject(s)
HIV Infections/virology , HIV-1 , HIV-2 , CD4 Lymphocyte Count , Cote d'Ivoire , HIV Infections/complications , HIV Infections/immunology , HIV Reverse Transcriptase/blood , HIV-1/enzymology , HIV-2/enzymology , Humans , Polymerase Chain Reaction , Portugal , RNA-Directed DNA Polymerase/blood , Tuberculosis/complications , Tuberculosis/virology , Viral Load
12.
J Virol ; 74(12): 5702-8, 2000 Jun.
Article in English | MEDLINE | ID: mdl-10823878

ABSTRACT

Primary simian immunodeficiency virus (SIV) isolated from sooty mangabey (SIVsm [n = 6]), stumptail (SIVstm [n = 1]), mandrill (SIVmnd [n = 1]), and African green (SIVagm [n = 1]) primates were examined for their ability to infect human cells and for their coreceptor requirements. All isolates infected human peripheral blood mononuclear cells (PBMCs) from a CCR5(+/+) donor, and seven of eight isolates tested also infected CCR5(-/-) PBMCs. Analysis of coreceptor utilization using GHOST and U87 cell lines revealed that all of the isolates tested used CCR5 and the orphan receptors STRL33 and GPR15. Coreceptors such as CCR2b, CCR3, CCR8, and CX3CR1 were also utilized by some primary SIV isolates. More importantly, we found that CXCR4 was used as a coreceptor by the SIVstm, the SIVagm, and four of the SIVsm isolates in GHOST and U87 cells. These data suggest that primary SIV isolates from diverse primate species can utilize CXCR4 for viral entry, similar to what has been described for human immunodeficiency viruses.


Subject(s)
Leukocytes, Mononuclear/virology , Receptors, CXCR4/metabolism , Receptors, G-Protein-Coupled , Receptors, Virus , Simian Immunodeficiency Virus/physiology , Animals , Antibodies, Monoclonal/immunology , Cell Line , Cells, Cultured , Cercocebus atys/virology , Chemokine CXCL12 , Chemokines, CXC/metabolism , Chemokines, CXC/pharmacology , Chlorocebus aethiops/virology , HIV-1/metabolism , HIV-1/physiology , Humans , Macaca nemestrina/virology , Papio/virology , Phylogeny , Receptors, CCR5/genetics , Receptors, CCR5/metabolism , Receptors, CXCR4/antagonists & inhibitors , Receptors, CXCR4/genetics , Receptors, CXCR4/immunology , Receptors, CXCR6 , Receptors, Chemokine , Receptors, Cytokine/genetics , Receptors, Cytokine/metabolism , Receptors, Peptide/genetics , Receptors, Peptide/metabolism , Sequence Deletion/genetics , Simian Immunodeficiency Virus/classification , Simian Immunodeficiency Virus/drug effects , Simian Immunodeficiency Virus/metabolism , Time Factors , Virus Replication
13.
Transfusion ; 40(4): 443-9, 2000 Apr.
Article in English | MEDLINE | ID: mdl-10773057

ABSTRACT

BACKGROUND: Recent identification of divergent simian or primate T-lymphotropic viruses (STLVs; PTLVs) in bonobos (formerly called pygmy chimpanzees; Pan paniscus; viruses: STLVpan-p and STLVpp1664) and a baboon (Papio hamadryas; viruses: STLVph969 or PTLV-L) have raised the possibility of human infection with these viruses. Divergent PTLV-infected primate sera show p24 bands on HTLV-I Western blots (WBs). It was investigated whether infection by divergent PTLV-like viruses could explain a subset of United States blood donors who reacted on HTLV-I EIAs and had indeterminate HTLV-I WBs with p24 bands. STUDY DESIGN AND METHODS: Epidemiologic characteristics of 1889 donors with HTLV-I-indeterminate WBs were compared to those of donors with confirmed retrovirus infections (393 with HIV, 201 with HTLV-I, 513 with HTLV-II) and 1.6 million donors with nonreactive screening tests. To directly probe for infection with divergent PTLVs, 2 HTLV-I-indeterminate donors born in Africa and 269 representative non-African-born donors with p24 bands on HTLV-I WBs (previously shown to be negative for HTLV-I and -II DNA by PCR) were selected for PTLV PCR analysis. DNA from peripheral blood MNC samples was tested for a proviral tax sequence by PCR using generic primers that amplify HTLV-I, HTLV-II, and the divergent PTLVs. Amplified tax sequences were detected by Southern blot hybridization to a (32)P-labeled generic PTLV probe. PCR-positive samples could then be typed by hybridization with virus-specific internal probes that differentiate HTLV-I, HTLV-II, PTLV-L, and STLVpan-p. RESULTS: In the epidemiologic analysis, HTLV-indeterminate status was independently associated with age of at least 25 years (OR = 2.19; 95% CI, 1.93-2.49), black (OR = 3.27; 95% CI, 2.90-3.67) or Hispanic (OR = 1.82; 95% CI, 1.52-2.16) race or ethnicity, and donation at one blood center (Baltimore) (OR = 1. 30; 95% CI, 1.11-1.53). None of the 271 HTLV-I WB-indeterminate samples tested positive by generic PTLV PCR analysis. CONCLUSION: Although the epidemiologic data suggest the possibility of undiagnosed HTLV-I, HTLV-II, or a cross-reactive virus such as PTLV among older, black, and Hispanic blood donors, the PCR data do not support the presence of divergent PTLV infection among US blood donors with HTLV-I-indeterminate results.


Subject(s)
Blood Donors , HTLV-I Infections/blood , HTLV-II Infections/blood , Pan paniscus/virology , Papio/virology , Animals , HTLV-I Antibodies/blood , HTLV-I Infections/epidemiology , HTLV-II Antibodies/blood , HTLV-II Infections/epidemiology , Humans , Mass Screening , Polymerase Chain Reaction , United States/epidemiology
14.
J Med Virol ; 61(1): 111-6, 2000 May.
Article in English | MEDLINE | ID: mdl-10745242

ABSTRACT

The human immunodeficiency virus type 2 (HIV-2) is responsible for 4. 5% of AIDS cases in Portugal. Six HIV-2 subtypes have been described so far, subtype A being proposed as more pathogenic than the rest. The relationship between the clinical status and levels of both cellular and plasma HIV-2 viraemia is not well known, nor their modifications under antiretroviral therapy. Thirty-two consecutive HIV-2 infected persons (17 men, 15 women) attending two different hospitals in Lisbon in 1997 were enrolled prospectively in the study. All but 4 individuals most likely acquired the infection through heterosexual contact. More than half of the study population was of African origin, mainly from Guinea-Bissau. Eleven (34.4%) patients had developed clinical manifestations included within the B or C groups of the CDC classification system for HIV infection, with the rest being asymptomatic. Half of the population was undergoing antiretroviral treatment at the time of the study. HIV-2 subtypes were investigated using a new Nef-based restriction fragment length polymorphism (RFLP) method that allows differentiation of the main two variants, A and B. Plasma viral load was quantified using a new quantitative competitive reverse transcriptase polymerase chain reaction (QcRT-PCR) procedure as well as the Amp-RT assay. Virus isolation was attempted from peripheral blood mononuclear cells. All but one person carried HIV-2 subtype A. Plasma viraemia examined by QcRT-PCR was measurable in 15 (50%) of 30 subjects, yielding in all instances values below 20,000 HIV-2 RNA copies per ml. Plasma RT activity could be detected in only 10 (33%) of 30 subjects, a rate much lower than that seen in HIV-1 infection. Virus was isolated from 16 (53.3%) of 30 patients. A significant correlation was found between CD4+ counts, clinical status, rate of virus isolation, and plasma viral load by both QcRT-PCR and Amp-RT. In conclusion, HIV-2 subtype A is the predominant variant circulating in Portugal among both natives and immigrants. A lower cellular and plasma viral load with respect to HIV-1 was seen in persons without immunosuppression, from whom the rate of virus recovery was extremely low.


Subject(s)
HIV-2/isolation & purification , Female , Gene Products, nef/analysis , HIV-2/classification , HIV-2/genetics , Humans , Male , Middle Aged , Polymorphism, Restriction Fragment Length , Portugal , Prospective Studies , Reverse Transcriptase Polymerase Chain Reaction , Serotyping , Viral Load , nef Gene Products, Human Immunodeficiency Virus
15.
Lancet ; 355(9203): 551-2, 2000 Feb 12.
Article in English | MEDLINE | ID: mdl-10683011

ABSTRACT

We investigated 322 North American zoo workers in an anonymous serosurvey for antibodies to simian foamy viruses to establish the potential risk of zoonotic transmission by these retroviruses. 4 of 133 (3%) individuals who worked specifically with mammals including primates were seropositive, primarily with chimp-like viruses, indicating the importance of work practices to reduce exposure to these agents.


Subject(s)
Animal Husbandry , Antibodies, Viral/isolation & purification , Occupational Diseases/etiology , Retroviridae Infections/transmission , Spumavirus/isolation & purification , Animals , Chlorocebus aethiops , Humans , North America , Occupational Diseases/blood , Occupational Diseases/virology , Pan troglodytes , Papio , Retroviridae Infections/blood , Retroviridae Infections/immunology
16.
J Virol ; 73(11): 9619-24, 1999 Nov.
Article in English | MEDLINE | ID: mdl-10516073

ABSTRACT

Although foamy viruses (FVs) are endemic among nonhuman primates, FV infection among humans is rare. Recently, simian foamy virus (SFV) infection was reported in 4 of 231 individuals occupationally exposed to primates (1.8%). Secondary transmission to spouses has not been seen, suggesting that while FV is readily zoonotic, humans may represent dead-end hosts. Among different simian species, SFV demonstrates significant sequence diversity within the U3 region of the long terminal repeat (LTR) and 3' accessory open reading frames (ORFs). To examine if persistent human SFV infection and apparent lack of secondary transmission are associated with genetic adaptations in FV regulatory regions, we conducted sequence analysis of the LTR, internal promoter, ORF-1, and ORF-2 on a tissue culture isolate and peripheral blood mononuclear cell samples from a human infected with SFV of African green monkey origin (SFV-3). Compared to the prototype SFV-3 sequence, the LTR, internal promoter, and FV transactivator (ORF-1) showed sequence conservation, suggesting that FV zoonosis is not dependent on host-specific adaptation to these transcriptionally important regions. However, ORF-2 contains a number of deleterious mutations predicted to result in premature termination of protein synthesis. ORF-2 codes in part for the 60-kDa Bet fusion protein, proposed to be involved in the establishment of persistent cellular SFV infections. These results suggest that persistent human infection by SFV and reduced transmissibility may be influenced by the absence of a functional ORF-2.


Subject(s)
Genes, Viral , Monkey Diseases/virology , Open Reading Frames/genetics , Retroviridae Infections/transmission , Spumavirus/genetics , Spumavirus/isolation & purification , Zoonoses , Amino Acid Sequence , Animals , Base Sequence , Chlorocebus aethiops , Humans , Leukocytes, Mononuclear/virology , Molecular Sequence Data , Retroviridae Infections/virology , Terminal Repeat Sequences/genetics , Viral Regulatory and Accessory Proteins/genetics
17.
AIDS Res Hum Retroviruses ; 15(13): 1191-200, 1999 Sep 01.
Article in English | MEDLINE | ID: mdl-10480632

ABSTRACT

Drug susceptibility testing for the clinical management of human immunodeficiency virus type 1 (HIV-1)-infected persons is often curtailed because such testing is expensive and time consuming. We describe a non-culture-based phenotypic assay for the rapid analysis of HIV-1 resistance to nevirapine. The assay measures the susceptibility of plasma reverse transcriptase (RT) activity to inhibition by nevirapine by using the PCR-based Amp-RT assay. Assay validation was made using two reference wild-type (WT) and six other nevirapine-resistant (>100-fold) HIV-1 isolates. Amp-RT IC50 values were found to correlate with those obtained by a conventional replication-based assay. The results also indicated that 50 microM nevirapine can be used in a single screening test to detect nevirapine resistance. Analysis of virus mixtures showed a detection threshold of 10% of nevirapine-resistant HIV-1 in a background of WT virus. To evaluate the assay on clinical samples, 30 plasma specimens collected longitudinally from 4 patients before and after treatment with nevirapine were analyzed, and results were compared with codon 181 genotypes. Preteatment samples and those obtained during the first 6 days of therapy (n = 21) were sensitive to nevirapine, and none had detectable Y181C mutation. Phenotypic resistance was seen in eight samples obtained after 1 week of treatment and was correlated with detection of the Y181C mutation. An increase in the level of phenotypic resistance was seen over time. These data validate this rapid and simple assay for monitoring phenotypic resistance to nevirapine.


Subject(s)
Anti-HIV Agents/pharmacology , HIV Reverse Transcriptase/antagonists & inhibitors , HIV-1/drug effects , Nevirapine/pharmacology , Reverse Transcriptase Inhibitors/pharmacology , Codon , Drug Resistance, Microbial/genetics , HIV Infections/drug therapy , HIV Infections/virology , HIV Reverse Transcriptase/blood , HIV-1/enzymology , HIV-1/genetics , HIV-1/physiology , Humans , Inhibitory Concentration 50 , Microbial Sensitivity Tests/methods , Mutation , Nevirapine/therapeutic use , Polymerase Chain Reaction/methods , RNA, Viral/blood , Reverse Transcriptase Inhibitors/therapeutic use , Viral Plaque Assay , Virus Cultivation
18.
Transplantation ; 68(2): 183-8, 1999 Jul 27.
Article in English | MEDLINE | ID: mdl-10440384

ABSTRACT

BACKGROUND: Pigs offer an unlimited source of xenografts for humans. However, recipients of pig xenografts are inevitably exposed to the porcine endogenous retrovirus (PERV), which is carried in the pig germline. The ability of PERV to infect human cells in vitro has heightened safety concerns regarding the transmission of PERV to pig xenograft recipients. METHODS: In response to the need to establish laboratory tests for the surveillance of PERV infection, we have developed polymerase chain reaction (PCR) assays to detect PERV pol and gag sequences by using conserved primers and probes. In addition, we have developed a PCR assay to detect pig-specific mitochondrial DNA (mtDNA) sequences as a marker of pig cells. RESULTS: Analysis of assay sensitivities using cloned target copies in a background of human DNA demonstrated a detection threshold of 1, 5, and 1 copy for the PERV gag, pol, and pig mtDNA PCR assays, respectively. All three PCR assays gave negative results on peripheral blood lymphocyte samples from 69 humans, as well as 6 baboons and 6 macaques, demonstrating 100% specificity. The PERV and pig mtDNA assays were integrated into a simple testing algorithm that allows the differentiation between pig cell microchimerism and true xenogeneic infection. To allow for monitoring of PERV expression, a reverse transcriptase-PCR assay was also developed to detect cell-free PERV RNA. CONCLUSION: The use of the diagnostic tests described here will help define the risks of PERV transmission associated with the use of pig xenografts in humans and nonhuman primates.


Subject(s)
Kidney Transplantation/pathology , Polymerase Chain Reaction , Retroviridae Infections/diagnosis , Transplantation, Heterologous/pathology , Animals , Cell Line , DNA, Viral/analysis , Humans , Predictive Value of Tests , Reproducibility of Results , Retroviridae/genetics , Retroviridae Infections/transmission , Sensitivity and Specificity
19.
Science ; 285(5431): 1236-41, 1999 Aug 20.
Article in English | MEDLINE | ID: mdl-10455044

ABSTRACT

Pig organs may offer a solution to the shortage of human donor organs for transplantation, but concerns remain about possible cross-species transmission of porcine endogenous retrovirus (PERV). Samples were collected from 160 patients who had been treated with various living pig tissues up to 12 years earlier. Reverse transcription-polymerase chain reaction (RT-PCR) and protein immunoblot analyses were performed on serum from all 160 patients. No viremia was detected in any patient. Peripheral blood mononuclear cells from 159 of the patients were analyzed by PCR using PERV-specific primers. No PERV infection was detected in any of the patients from whom sufficient DNA was extracted to allow complete PCR analysis (97 percent of the patients). Persistent microchimerism (presence of donor cells in the recipient) was observed in 23 patients for up to 8.5 years.


Subject(s)
Gammaretrovirus , Retroviridae Infections/transmission , Transplantation, Heterologous , Tumor Virus Infections/transmission , Zoonoses , Adolescent , Adult , Aged , Animals , Antibodies, Viral/blood , Child , Child, Preschool , Chimera , DNA, Viral/analysis , Extracorporeal Circulation , Female , Gammaretrovirus/genetics , Gammaretrovirus/immunology , Gammaretrovirus/isolation & purification , Humans , Immunoblotting , Islets of Langerhans Transplantation , Male , Middle Aged , RNA, Viral/analysis , Retrospective Studies , Retroviridae Infections/diagnosis , Reverse Transcriptase Polymerase Chain Reaction , Skin Transplantation , Swine , Transplantation, Heterologous/adverse effects , Tumor Virus Infections/diagnosis , Viremia/diagnosis
20.
J Virol ; 73(7): 5843-51, 1999 Jul.
Article in English | MEDLINE | ID: mdl-10364336

ABSTRACT

Reverse transcriptase (RT) activity has been detected recently in all chicken cell-derived measles and mumps vaccines. A study of a vaccine manufactured in Europe indicated that the RT is associated with particles containing endogenous avian retrovirus (EAV-0) RNA and originates from the chicken embryonic fibroblasts (CEF) used as a substrate for propagation of the vaccine. We investigated the origin of RT in measles and mumps vaccines from a U.S. manufacturer and confirm the presence of RT and EAV RNA. Additionally, we provide new evidence for the presence of avian leukosis virus (ALV) in both CEF supernatants and vaccines. ALV pol sequences were first identified in particle-associated RNA by amplification with degenerate retroviral pol primers. ALV RNA sequences from both the gag and env regions were also detected. Analysis of hypervariable region 2 of env revealed a subgroup E sequence, an endogenous-type ALV. Both CEF- and vaccine-derived RT activity could be blocked by antibodies to ALV RT. Release of ALV-like virus particles from uninoculated CEF was also documented by electron microscopy. Nonetheless, infectivity studies on susceptible 15B1 chicken cells gave no evidence of infectious ALV, which is consistent with the phenotypes of the ev loci identified in the CEF. PCR analysis of ALV and EAV proviral sequences in peripheral blood mononuclear cells from 33 children after measles and mumps vaccination yielded negative results. Our data indicate that the sources of RT activity in all RT-positive measles and mumps vaccines may not be similar and depend on the particular endogenous retroviral loci present in the chicken cell substrate used. The present data do not support transmission of either ALV or EAV to recipients of the U.S.-made vaccine and provide reassurance for current immunization policies.


Subject(s)
Avian Leukosis Virus/isolation & purification , Endogenous Retroviruses/isolation & purification , Measles Vaccine , Mumps Vaccine , RNA-Directed DNA Polymerase/genetics , Animals , Avian Leukosis Virus/enzymology , Avian Leukosis Virus/genetics , Base Sequence , Chick Embryo , Chickens , DNA, Viral , Drug Contamination , Endogenous Retroviruses/genetics , Genes, pol , Measles Vaccine/standards , Molecular Sequence Data , Mumps Vaccine/standards , RNA, Viral , Virion/ultrastructure
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