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1.
Methods Appl Fluoresc ; 8(1): 014008, 2020 Feb 03.
Article in English | MEDLINE | ID: mdl-31851960

ABSTRACT

We report the spectral properties of 2-Phenylindole (2PI) embedded in rigid poly (vinyl alcohol) (PVA) film. The 2PI in PVA film shows relatively strong and structured fluorescence with a maximum at 370 nm and surprisingly strong room temperature phosphorescence with an emission maximum of about 500 nm. The dye is highly immobilized in the polymer matrix, thus presenting high fluorescence anisotropy in an isotropic film of about 0.3 at room temperature. The 2-Phenylindole phosphorescence excited in the usual way through the electronic singlet state excitation (S0 â†’ S1 absorption) results in a very low, near zero anisotropy. We now report that we can directly excite the dye to the triplet state T1 and observe high phosphorescence anisotropy similar to the fluorescence anisotropy. The extinction coefficient for S0 â†’ T1 absorption in the PVA matrix is unusually high- only about 3 orders of magnitude lower than S0 â†’ S1 absorption. We consider this direct excitation to indole's triplet state a very significant finding that may lead to many practical applications. The unusually long-wavelength of excitation around 400 nm, much above typical UV absorption, results in a high phosphorescence anisotropy. This provides a new way to study rotational motion of larger biological objects in the microsecond time scale not accessible through typical fluorescence studies.

2.
Acta Biochim Pol ; 48(4): 1197-201, 2001.
Article in English | MEDLINE | ID: mdl-11995992

ABSTRACT

Papain activity was studied in water-organic solvent mixtures using the fluorogenic substrate Dabcyl-Lys-Phe-Gly-Gly-Ala-Ala-Edans. The increase of organic solvent (MeOH, EtOH, iPrOH, TFE, MeCN, (MeO)2Et and DMF) concentration in the mixture caused a substantial decrease the initial rate of papain-catalyzed hydrolysis. Moreover, the number of papain active sites decreased with the increase of DMF and MeOH concentration.


Subject(s)
Papain/chemistry , Amino Acid Sequence , Binding Sites , Dimethylformamide/chemistry , Dose-Response Relationship, Drug , Hydrolysis , Kinetics , Molecular Sequence Data , Peptide Biosynthesis , Spectrometry, Fluorescence
3.
Acta Biochim Pol ; 48(4): 995-1002, 2001.
Article in English | MEDLINE | ID: mdl-11996007

ABSTRACT

Papain activity in a buffer containing Me2SO was studied using fluorogenic substrates. It was found that the number of active sites of papain decreases with increasing Me2SO concentration whereas the incubation time, in a buffer containing 3% Me2SO does not affect the number of active sites. However, an increase of papain incubation time in the buffer with 3% Me2SO decreased the initial rate of hydrolysis of Z-Phe-Arg-Amc as well as Dabcyl-Lys-Phe-Gly-Gly-Ala-Ala-Edans. Moreover, an increase of Me2SO concentration in working buffer decreased the initial rate of papain-catalysed hydrolysis of both substrates. A rapid decrease of the initial rate (by up to 30%) was observed between 1 and 2% Me2SO. Application of the Michaelis-Menten equation revealed that at the higher Me2SO concentrations the apparent values of k(cat)/Km decreased as a result of Km increase and kcat decrease. However, Me2SO changed the substrate binding process more effectively (Km) than the rate of catalysis k(cat).


Subject(s)
Dimethyl Sulfoxide/pharmacology , Papain/metabolism , Amino Acid Sequence , Binding Sites , Catalysis , Dose-Response Relationship, Drug , Free Radical Scavengers/chemistry , Hydrolysis , Kinetics , Molecular Sequence Data , Peptide Biosynthesis , Peptides/chemistry , Spectrometry, Fluorescence , Time Factors
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