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1.
BMC Biotechnol ; 13: 68, 2013 Aug 30.
Article in English | MEDLINE | ID: mdl-24128347

ABSTRACT

BACKGROUND: The yeast Saccharomyces cerevisiae can be a useful model for studying cellular mechanisms related to sterol synthesis in humans due to the high similarity of the mevalonate pathway between these organisms. This metabolic pathway plays a key role in multiple cellular processes by synthesizing sterol and nonsterol isoprenoids. Statins are well-known inhibitors of 3-hydroxy-3-methylglutaryl-CoA reductase (HMGR), the key enzyme of the cholesterol synthesis pathway. However, the effects of statins extend beyond their cholesterol-lowering action, since inhibition of HMGR decreases the synthesis of all products downstream in the mevalonate pathway. Using transgenic yeast expressing human HMGR or either yeast HMGR isoenzyme we studied the effects of simvastatin, atorvastatin, fluvastatin and rosuvastatin on the cell metabolism. RESULTS: Statins decreased sterol pools, prominently reducing sterol precursors content while only moderately lowering ergosterol level. Expression of genes encoding enzymes involved in sterol biosynthesis was induced, while genes from nonsterol isoprenoid pathways, such as coenzyme Q and dolichol biosynthesis or protein prenylation, were diversely affected by statin treatment. Statins increased the level of human HMGR protein substantially and only slightly affected the levels of Rer2 and Coq3 proteins involved in non-sterol isoprenoid biosynthesis. CONCLUSION: Statins influence the sterol pool, gene expression and protein levels of enzymes from the sterol and nonsterol isoprenoid biosynthesis branches and this effect depends on the type of statin administered. Our model system is a cheap and convenient tool for characterizing individual statins or screening for novel ones, and could also be helpful in individualized selection of the most efficient HMGR inhibitors leading to the best response and minimizing serious side effects.


Subject(s)
Hydroxymethylglutaryl CoA Reductases/metabolism , Hydroxymethylglutaryl-CoA Reductase Inhibitors/pharmacology , Mevalonic Acid/metabolism , Saccharomyces cerevisiae/metabolism , Atorvastatin , Fatty Acids, Monounsaturated/pharmacology , Fluorobenzenes/pharmacology , Fluvastatin , Fungal Proteins/metabolism , Heptanoic Acids/pharmacology , Humans , Hydroxymethylglutaryl CoA Reductases/genetics , Indoles/pharmacology , Isoenzymes/metabolism , Organisms, Genetically Modified , Pyrimidines/pharmacology , Pyrroles/pharmacology , Rosuvastatin Calcium , Saccharomyces cerevisiae/growth & development , Simvastatin/pharmacology , Sterols/biosynthesis , Sulfonamides/pharmacology , Terpenes/metabolism
2.
Acta Biochim Pol ; 58(4): 635-9, 2011.
Article in English | MEDLINE | ID: mdl-22132374

ABSTRACT

Statins are inhibitors of 3-hydroxy-3-methylglutaryl-CoA reductase (HMGR), the key enzyme of the sterol biosynthesis pathway. Statin therapy is commonly regarded as well tolerated. However, serious adverse effects have also been reported, especially during high-dose statin therapy. The aim of our study was to investigate the effect of statins on gene expression profiles in human hepatoma HepG2 cells using Affymetrix Human Genome U133 Plus 2.0 arrays. Expression of 102, 857 and 1091 genes was changed substantially in HepG2 cells treated with simvastatin, fluvastatin and atorvastatin, respectively. Pathway and gene ontology analysis showed that many of the genes with changed expression levels were involved in a broad range of metabolic processes. The presented data clearly indicate substantial differences between the tested statins.


Subject(s)
Carcinoma, Hepatocellular/metabolism , Gene Expression Profiling , Gene Expression Regulation/drug effects , Hydroxymethylglutaryl-CoA Reductase Inhibitors/pharmacology , Atorvastatin , Carcinoma, Hepatocellular/drug therapy , Carcinoma, Hepatocellular/genetics , Computational Biology , Fatty Acids, Monounsaturated/pharmacology , Fluvastatin , Genome, Human , Hep G2 Cells , Heptanoic Acids/pharmacology , Humans , Hydroxymethylglutaryl CoA Reductases/genetics , Hydroxymethylglutaryl CoA Reductases/metabolism , Indoles/pharmacology , Metabolic Networks and Pathways/drug effects , Metabolic Networks and Pathways/genetics , Mevalonic Acid/metabolism , Oligonucleotide Array Sequence Analysis , Pilot Projects , Principal Component Analysis , Pyrroles/pharmacology , Simvastatin/pharmacology
3.
PLoS One ; 4(12): e8499, 2009 Dec 30.
Article in English | MEDLINE | ID: mdl-20041128

ABSTRACT

In humans, defects in lipid metabolism are associated with a number of severe diseases such as atherosclerosis, obesity and type II diabetes. Hypercholesterolemia is a primary risk factor for coronary artery disease, the major cause of premature deaths in developed countries. Statins are inhibitors of 3-hydroxy-3-methylglutaryl-CoA reductase (HMGR), the key enzyme of the sterol synthesis pathway. Since yeast Saccharomyces cerevisiae harbours many counterparts of mammalian enzymes involved in lipid-synthesizing pathways, conclusions drawn from research with this single cell eukaryotic organism can be readily applied to higher eukaryotes. Using a yeast strain with deletions of both HMG1 and HMG2 genes (i.e. completely devoid of HMGR activity) with introduced wild-type or mutant form of human HMGR (hHMGR) gene we investigated the effects of statins on the lipid metabolism of the cell. The relative quantification of mRNA demonstrated a different effect of simvastatin on the expression of the wild-type and mutated hHMGR gene. GC/MS analyses showed a significant decrease of sterols and enhanced conversion of squalene and sterol precursors into ergosterol. This was accompanied by the mobilization of ergosterol precursors localized in lipid particles in the form of steryl esters visualized by confocal microscopy. Changes in the level of ergosterol and its precursors in cells treated with simvastatin depend on the mutation in the hHMGR gene. HPLC/MS analyses indicated a reduced level of phospholipids not connected with the mevalonic acid pathway. We detected two significant phenomena. First, cells treated with simvastatin develop an adaptive response compensating the lower activity of HMGR. This includes enhanced conversion of sterol precursors into ergosterol, mobilization of steryl esters and increased expression of the hHMGR gene. Second, statins cause a substantial drop in the level of glycerophospholipids.


Subject(s)
Hydroxymethylglutaryl-CoA Reductase Inhibitors/pharmacology , Lipid Metabolism/drug effects , Saccharomyces cerevisiae/cytology , Saccharomyces cerevisiae/metabolism , Chromatography, Thin Layer , Gas Chromatography-Mass Spectrometry , Gene Expression Regulation, Enzymologic/drug effects , Gene Expression Regulation, Fungal/drug effects , Humans , Hydroxymethylglutaryl CoA Reductases/genetics , Hydroxymethylglutaryl CoA Reductases/metabolism , Microscopy, Confocal , Mutant Proteins/metabolism , RNA, Messenger/genetics , RNA, Messenger/metabolism , Saccharomyces cerevisiae/genetics , Saccharomyces cerevisiae Proteins/genetics , Saccharomyces cerevisiae Proteins/metabolism , Simvastatin/pharmacology , Squalene/metabolism , Staining and Labeling , Sterols/metabolism
4.
Biochim Biophys Acta ; 1781(10): 627-34, 2008 Oct.
Article in English | MEDLINE | ID: mdl-18771750

ABSTRACT

Rsp5p, a yeast S. cerevisiae ubiquitin ligase, is essential for regulation of unsaturated fatty acid synthesis via activation of the transcriptional activators Spt23p and Mga2p. Here we show that the conditional mutant rsp5-19 produces decreased levels of the end products of mevalonate pathway, such as ergosterol, ubiquinone and of dolichols, especially those with 19-24 isoprene units. The mechanism of Rsp5p involvement in the control of these lipid synthesis pathways was addressed by overproduction of Rsp5p-independent Spt23p or Mga2p. Expression of constitutively active forms of these transactivators resulted in excess production of ergosterol, but did not restore a wild-type level of dolichols. Moreover, synthesis of long chain dolichols was decreased in the wild-type and a rsp5-19 background. Finally, overproduction of active Spt23p or Mga2p was accompanied by the appearance of large lipid particles in the wild-type and rsp5-19 strains as observed by Nile Red staining, due to accumulation of unsaturated triacylglycerol. Thus, we conclude that Rsp5p, Spt23p and Mga2p may participate in the control of the homeostasis of lipids and lipid particles.


Subject(s)
Mevalonic Acid/metabolism , Saccharomyces cerevisiae Proteins/metabolism , Saccharomyces cerevisiae/metabolism , Triglycerides/biosynthesis , Alkyl and Aryl Transferases/genetics , Alkyl and Aryl Transferases/metabolism , Biosynthetic Pathways , Cytoplasmic Granules/metabolism , Dimethylallyltranstransferase/genetics , Dimethylallyltranstransferase/metabolism , Dolichols/biosynthesis , Endosomal Sorting Complexes Required for Transport , Ergosterol/biosynthesis , Lipid Metabolism , Membrane Proteins , Mutation , Saccharomyces cerevisiae/cytology , Saccharomyces cerevisiae/genetics , Saccharomyces cerevisiae Proteins/genetics , Sterols/biosynthesis , Trans-Activators/genetics , Trans-Activators/metabolism , Transcription Factors , Transformation, Genetic , Ubiquinone/biosynthesis , Ubiquitin-Protein Ligase Complexes/genetics , Ubiquitin-Protein Ligase Complexes/metabolism
5.
Biopolymers ; 86(2): 155-64, 2007 Jun 05.
Article in English | MEDLINE | ID: mdl-17345630

ABSTRACT

A comparison of amino acid sequences of yeast Rer2p and Srt1p Z-prenyltransferases shows that the spatial organization of their substrate tunnels agrees with that determined by X-ray for the E. coli undecaprenyl diphosphate synthase (UPPs). The observed trend in the maxima of product length distribution shifted from C(55) in UPPs to C(80) in Rer2p and to C(110) in Srt1p. This suggests a significant increase in the size of the enzyme hydrophobic tunnel from approximately 1000 A(3) of E. coli UPPs to approximately 1300 A(3) required to accommodate C(80) in Rer2p and to 1700 A(3) for C(110) in Srt1p. Moreover, Srt1p products reaching C(290) indicate the failure of a strict bacterial-like chain length control. On the basis of E. coli UPPs crystallographic structure the yeast Rer2p model was constructed. In the model three amino acid residues inserted into the sequence corresponding to the "floor" region of the tunnel extends the bottom loop what results in the required increase of the tunnel volume. Moreover, thermal fluctuations of this loop occasionally create a hole in the tunnel floor, making escape of polyprenol omega end out of the tunnel possible what switches off the control mechanism of product length thereby allowing a practically unlimited elongation process leading to an exponential distribution of longer chain polyprenols.


Subject(s)
Dimethylallyltranstransferase/chemistry , Pentanols/metabolism , Polymers/metabolism , Saccharomyces cerevisiae/enzymology , Amino Acid Sequence , Animals , Dimethylallyltranstransferase/genetics , Dimethylallyltranstransferase/metabolism , Escherichia coli/enzymology , Escherichia coli/genetics , Hemiterpenes , Humans , Mice , Models, Molecular , Molecular Sequence Data , Saccharomyces cerevisiae/genetics , Sequence Alignment
6.
Cell Biol Int ; 30(2): 122-6, 2006 Feb.
Article in English | MEDLINE | ID: mdl-16271301

ABSTRACT

We have investigated dolichol synthesis in yeast Pichia pastoris. Growth of these cells on methanol causes peroxisome proliferation and induction of peroxisomal enzymes. Twenty-four hours methanol treatment was sufficient for the appearance of longer-chain dolichols. Less specific oleic acid induction needed 48 h for the synthesis of longer dolichol family with typical one still present. Cells cultured in non-inducing conditions for 48 h did not reveal the presence of additional dolichol family. Peroxisomes purified from oleic acid treated cells synthesize in vitro polyprenols longer by two isoprene residues than those synthesized by microsomal fraction from glucose culture. These observations lead us to suggest that chain length of dolichols synthesized in yeast cell may depend on the carbon and energy source supply which mobilizes metabolic pathways localized to different cellular compartments.


Subject(s)
Peroxisomes/physiology , Pichia/enzymology , Transferases/metabolism , Chromatography, High Pressure Liquid , Chromatography, Thin Layer , Dolichols/analysis , Hemiterpenes , Pentanols/analysis
7.
Biochem J ; 395(1): 173-81, 2006 Apr 01.
Article in English | MEDLINE | ID: mdl-16363994

ABSTRACT

The Rsp5 ubiquitin ligase plays a role in many cellular processes including the biosynthesis of unsaturated fatty acids. The PIS1 (phosphatidylinositol synthase gene) encoding the enzyme Pis1p which catalyses the synthesis of phosphatidylinositol from CDP-diacyglycerol and inositol, was isolated in a screen for multicopy suppressors of the rsp5 temperature sensitivity phenotype. Suppression was allele non-specific. Interestingly, expression of PIS1 was 2-fold higher in the rsp5 mutant than in wild-type yeast, whereas the introduction of PIS1 in a multicopy plasmid increased the level of Pis1p 6-fold in both backgrounds. We demonstrate concomitantly that the expression of INO1 (inositol phosphate synthase gene) was also elevated approx. 2-fold in the rsp5 mutant as compared with the wild-type, and that inositol added to the medium improved growth of rsp5 mutants at a restrictive temperature. These results suggest that enhanced phosphatidylinositol synthesis may account for PIS1 suppression of rsp5 defects. Analysis of lipid extracts revealed the accumulation of saturated fatty acids in the rsp5 mutant, as a consequence of the prevention of unsaturated fatty acid synthesis. Overexpression of PIS1 did not correct the cellular fatty acid content; however, saturated fatty acids (C(16:0)) accumulated preferentially in phosphatidylinositol, and (wild-type)-like fatty acid composition in phosphatidylethanolamine was restored.


Subject(s)
Saccharomyces cerevisiae/enzymology , Saccharomyces cerevisiae/growth & development , Transferases (Other Substituted Phosphate Groups)/metabolism , Ubiquitin-Protein Ligase Complexes/deficiency , Catalysis , Cell Survival , Endosomal Sorting Complexes Required for Transport , Fatty Acids/metabolism , Gene Expression Regulation, Fungal , Genes, Suppressor , Inositol/pharmacology , Mutation/genetics , Myo-Inositol-1-Phosphate Synthase/genetics , Phenotype , Phosphatidylethanolamines/metabolism , Phosphatidylinositols/metabolism , Saccharomyces cerevisiae/cytology , Saccharomyces cerevisiae/drug effects , Saccharomyces cerevisiae Proteins/genetics , Temperature , Transferases (Other Substituted Phosphate Groups)/genetics , Ubiquitin-Protein Ligase Complexes/genetics , Up-Regulation/genetics
8.
Biochimie ; 88(3-4): 271-6, 2006.
Article in English | MEDLINE | ID: mdl-16213651

ABSTRACT

Dolichol formation is examined in three Saccharomyces cerevisiae strains with mutations in the ERG20 gene encoding farnesyl diphosphate synthase (mevalonic acid pathway) and/or the ERG9 gene encoding squalene synthase (sterol synthesis pathway) differing in the amount and chain length of the polyisoprenoids synthesized. Our results suggest that the activities of two yeast cis-prenyltransferases Rer2p and Srt1p and polyprenol reductase are not co-regulated and that reductase may be the rate-limiting enzyme in dolichol synthesis if the amount of polyisoprenoids synthesized exceeds a certain level. We demonstrate that reductase preferentially acts on typical polyprenols with 13-18 isoprene residues but can reduce much longer polyprenols with even 32 isoprene residues.


Subject(s)
Alkyl and Aryl Transferases/metabolism , Dimethylallyltranstransferase/metabolism , Oxidoreductases/metabolism , Saccharomyces cerevisiae Proteins/metabolism , Saccharomyces cerevisiae/enzymology , Transferases/metabolism , Alkyl and Aryl Transferases/chemistry , Alkyl and Aryl Transferases/genetics , Chromatography, High Pressure Liquid , Dimethylallyltranstransferase/chemistry , Dimethylallyltranstransferase/genetics , Dolichols/biosynthesis , Gene Expression Regulation, Fungal , Oxidoreductases/chemistry , Saccharomyces cerevisiae/genetics , Saccharomyces cerevisiae/growth & development , Saccharomyces cerevisiae/metabolism , Saccharomyces cerevisiae Proteins/chemistry , Saccharomyces cerevisiae Proteins/genetics , Transferases/chemistry , Transferases/genetics
9.
Acta Biochim Pol ; 52(1): 45-55, 2005.
Article in English | MEDLINE | ID: mdl-15827605

ABSTRACT

Farnesyl diphosphate synthase (FPPS) is a key enzyme in isoprenoid biosynthesis which supplies sesquiterpene precursors for several classes of essential metabolites including sterols, dolichols, ubiquinones and carotenoids as well as substrates for farnesylation and geranylgeranylation of proteins. It catalyzes the sequential head-to-tail condensation of two molecules of isopentenyl diphosphate with dimethylallyl diphosphate. The enzyme is a homodimer of subunits, typically having two aspartate-rich motifs with two sets of substrate binding sites for an allylic diphosphate and isopentenyl diphosphate per homodimer. The synthase amino-acid residues at the 4th and 5th positions before the first aspartate rich motif mainly determine product specificity. Hypothetically, type I (eukaryotic) and type II (eubacterial) FPPSs evolved from archeal geranylgeranyl diphosphate synthase by substitutions in the chain length determination region. FPPS belongs to enzymes encoded by gene families. In plants this offers the possibility of differential regulation in response to environmental changes or to herbivore or pathogen attack.


Subject(s)
Alkyl and Aryl Transferases/metabolism , Alkyl and Aryl Transferases/chemistry , Amino Acid Sequence , Arginine/metabolism , Dimerization , Geranyltranstransferase , Lysine/metabolism , Models, Molecular , Molecular Sequence Data , Sequence Homology, Amino Acid , Substrate Specificity
10.
Cell Biol Int ; 28(3): 193-7, 2004.
Article in English | MEDLINE | ID: mdl-14984745

ABSTRACT

The yeast farnesyl diphosphate synthase (FPPS) gene was engineered so as to construct allelic forms giving various activities of the enzyme. One of the substitutions was F96W in the chain length determination region. The other, K197, conserved within a consensus sequence found in the majority of FPP and GGPP synthases, was substituted by R, E and V. An intricate correlation has been found between the FPPS activity, the amount of ergosterol synthesized and cell growth of a mutant strain defective in FPPS. About 40% of wt FPPS activity was sufficient to support normal growth of the mutant. With further decline of FPPS activity (20 down to 3%) the amount of ergosterol remained unchanged at approximately 0.16% (vs dry weight), whereas growth yield decreased and lag times increased. We postulate that, in addition to ergosterol initiating and maintaining growth of yeast cells, FPP and/or its derivatives participate in these processes.


Subject(s)
Alkyl and Aryl Transferases/metabolism , Ergosterol/metabolism , Saccharomyces cerevisiae/metabolism , Alkyl and Aryl Transferases/genetics , Cell Division/physiology , Geranyltranstransferase , Models, Molecular , Mutation , Saccharomyces cerevisiae/cytology , Time Factors
11.
Acta Biochim Pol ; 49(3): 775-80, 2002.
Article in English | MEDLINE | ID: mdl-12422246

ABSTRACT

The plant Solanum nigrum treated with the pathogen Phytophthora infestans-derived elicitor responded by elevated reactive oxygen species (ROS) production, lipid peroxidation and lipoxygenase (EC 1.13.11.12) activity in comparison with control plants indicating that oxidative stress took place. We demonstrate that these events are accompanied by a significant increase in plastoquinone (PQ) level. It is postulated that PQ may be associated with mechanisms maintaining a tightly controlled balance between the accumulation of ROS and antioxidant activity that determines the full expression of effective defence.


Subject(s)
Adaptation, Physiological/physiology , Plastoquinone/metabolism , Solanaceae/metabolism , Antioxidants/chemistry , Antioxidants/metabolism , Antioxidants/pharmacology , Lipid Peroxidation/physiology , Lipoxygenase/metabolism , Oxidation-Reduction , Phytophthora/pathogenicity , Plant Diseases/microbiology , Plant Leaves/cytology , Plant Leaves/metabolism , Plant Leaves/microbiology , Plastoquinone/analysis , Plastoquinone/pharmacology , Reactive Oxygen Species/metabolism , Solanaceae/cytology , Solanaceae/microbiology
12.
Acta Biochim Pol ; 49(3): 781-7, 2002.
Article in English | MEDLINE | ID: mdl-12422247

ABSTRACT

The yeast Saccharomyces cerevisiae strain W303 synthesizes in the early logarithmic phase of growth dolichols of 14-18 isoprene residues. The analysis of the polyisoprenoids present in the stationary phase revealed an additional family which proved to be also dolichols but of 19-24 isoprene residues, constituting 39% of the total dolichols. The transfer of early logarithmic phase cells to a starvation medium lacking glucose or nitrogen resulted in the synthesis of the longer chain dolichols. The additional family of dolichols represented 13.8% and 10.3% of total dolichols in the glucose and nitrogen deficient media, respectively. The level of dolichols in yeast cells increased with the age of the cultures. Since both families of dolichols are present in stationary phase cells we postulate that the longer chain dolichols may be responsible for the physico-chemical changes in cellular membranes allowing yeast cells to adapt to nutrient deficient conditions to maintain long-term viability.


Subject(s)
Dolichols/biosynthesis , Glucose/deficiency , Nitrogen/deficiency , Saccharomyces cerevisiae/metabolism , Chromatography, High Pressure Liquid , Culture Media , Dolichols/chemistry , Saccharomyces cerevisiae/genetics , Saccharomyces cerevisiae/growth & development , Time Factors
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