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1.
Biochim Biophys Acta ; 1828(8): 1881-8, 2013 Aug.
Article in English | MEDLINE | ID: mdl-23603223

ABSTRACT

In cells, from bacteria to plants or mammals, lipids are stored in natural emulsions called oil bodies (OBs). This organelle is surrounded by a phospholipid monolayer which is thought to contain integral proteins involved in its stabilization. The insertion and fold of these proteins into the phospholipid monolayer are poorly understood. In seed OBs, the most abundant integral proteins are oleosins, which contain a 70-residue central hydrophobic domain. The secondary structure of solubilized oleosins varies greatly from mainly alpha helices to a predominantly beta sheets depending on the detergent used. To study the fold of integral membrane proteins inserted in a cellular OB environment, S3 protein, the major Arabidopsis thaliana seed oleosin, was targeted to Saccharomyces cerevisiae OBs. The diameter of purified yeast OBs harboring S3 or S3 fused with the Green Fluorescent Protein (GFP) was smaller and more homogeneous than plant OBs. Comparison of the secondary structure of S3 and S3-GFP was used to validate the structure of folded S3. Circular dichroism using synchrotron radiation indicated that S3 and S3-GFP in yeast OBs contain mainly beta secondary structures. While yeast OBs are chemically different to A. thaliana seed OBs, this approach allowed the secondary structure of S3 in OB particles to be determined for the first time.


Subject(s)
Arabidopsis Proteins/chemistry , Arabidopsis/metabolism , Cell Membrane/chemistry , Oils/chemistry , Protein Folding , Recombinant Fusion Proteins/metabolism , Saccharomyces cerevisiae/metabolism , Arabidopsis Proteins/metabolism , Cell Membrane/metabolism , Circular Dichroism , Green Fluorescent Proteins/genetics , Green Fluorescent Proteins/metabolism , Hydrophobic and Hydrophilic Interactions , Immunoblotting , Membrane Proteins/genetics , Membrane Proteins/metabolism , Microscopy, Fluorescence , Oils/metabolism , Phosphorylcholine/analogs & derivatives , Phosphorylcholine/chemistry , Protein Structure, Secondary , Recombinant Fusion Proteins/genetics
2.
Biochimie ; 95(4): 889-902, 2013 Apr.
Article in English | MEDLINE | ID: mdl-23274177

ABSTRACT

S-nitrosoglutathione reductase (GSNOR), also known as S-(hydroxymethyl)glutathione (HMGSH) dehydrogenase, belongs to the large alcohol dehydrogenase superfamily, namely to the class III ADHs. GSNOR catalyses the oxidation of HMGSH to S-formylglutathione using a catalytic zinc and NAD(+) as a coenzyme. The enzyme also catalyses the NADH-dependent reduction of S-nitrosoglutathione (GSNO). In plants, GSNO has been suggested to serve as a nitric oxide (NO) reservoir locally or possibly as NO donor in distant cells and tissues. NO and NO-related molecules such as S-nitrosothiols (S-NOs) play a central role in the regulation of normal plant physiological processes and host defence. The enzyme thus participates in the cellular homeostasis of S-NOs and in the metabolism of reactive nitrogen species. Although GSNOR has recently been characterized from several organisms, this study represents the first detailed biochemical and structural characterization of a plant GSNOR, that from tomato (Solanum lycopersicum). SlGSNOR gene expression is higher in roots and stems compared to leaves of young plants. It is highly expressed in the pistil and stamens and in fruits during ripening. The enzyme is a dimer and preferentially catalyses reduction of GSNO while glutathione and S-methylglutathione behave as non-competitive inhibitors. Using NAD(+), the enzyme oxidizes HMGSH and other alcohols such as cinnamylalcohol, geraniol and ω-hydroxyfatty acids. The crystal structures of the apoenzyme, of the enzyme in complex with NAD(+) and in complex with NADH, solved up to 1.9 Å resolution, represent the first structures of a plant GSNOR. They confirm that the binding of the coenzyme is associated with the active site zinc movement and changes in its coordination. In comparison to the well characterized human GSNOR, plant GSNORs exhibit a difference in the composition of the anion-binding pocket, which negatively influences the affinity for the carboxyl group of ω-hydroxyfatty acids.


Subject(s)
Aldehyde Oxidoreductases/chemistry , Aldehyde Oxidoreductases/metabolism , Solanum lycopersicum/enzymology , Aldehyde Oxidoreductases/genetics , Amino Acid Sequence , Apoenzymes/chemistry , Apoenzymes/genetics , Apoenzymes/metabolism , Catalytic Domain , Cloning, Molecular , Gene Expression Regulation, Plant , Glutathione/metabolism , Humans , Solanum lycopersicum/genetics , Models, Molecular , Molecular Sequence Data , NAD/metabolism , Oxidation-Reduction
3.
Appl Microbiol Biotechnol ; 73(2): 434-42, 2006 Nov.
Article in English | MEDLINE | ID: mdl-16847604

ABSTRACT

Cheese flavour is the result of complex biochemical transformations attributed to bacteria and yeasts grown on the curd of smear-ripened cheeses. Volatile sulphur compounds (VSCs) are responsible for the characteristic aromatic notes of several cheeses. In the present study, we have assessed the ability of Kluyveromyces lactis, Kluyveromyces marxianus and Saccharomyces cerevisiae strains, which are frequently isolated from smear-ripened cheeses, to grow and deacidify a cheese medium and generate VSCs resulting from L-methionine degradation. The Kluyveromyces strains produced a wider variety and higher amounts of VSCs than the S. cerevisiae ones. We have shown that the pathway is likely to be proceeding differently in these two yeast genera. The VSCs are mainly generated through the degradation of 4-methylthio-oxobutyric acid in the Kluyveromyces strains, in contrast to the S. cerevisiae ones which have higher L-methionine demethiolating activity, resulting in a direct conversion of L-methionine to methanethiol. The deacidification activity which is of major importance in the early stages of cheese-ripening was also compared in S. cerevisiae and Kluyveromyces strains.


Subject(s)
Cheese , Kluyveromyces/physiology , Saccharomyces cerevisiae/physiology , Sulfur/chemistry , Cell-Free System , Culture Media , Ecosystem , Fermentation , Food Technology/methods , Fungal Proteins/chemistry , Kluyveromyces/metabolism , Lactates/chemistry , Lactose/chemistry , Methane/chemistry , Methionine/chemistry , Odorants , Saccharomyces cerevisiae/metabolism , Sulfur Compounds/chemistry , Time Factors
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