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1.
Mol Phylogenet Evol ; 58(2): 271-82, 2011 Feb.
Article in English | MEDLINE | ID: mdl-21044888

ABSTRACT

We present a molecular phylogeny of bullfinches (Pyrrhula Brisson, 1760) based on 2357bp DNA sequence information of mitochondrial genes (cyt-b, 16S rRNA) and nuclear introns (fib-7, GAPDH-11). The genus is clearly a monophyletic group. Within the limits of Pyrrhula, molecular methods support the subdivision of three main groups: (1) "Southeast-Asian bullfinches" (P. nipalensis and P. leucogenis), (2) "Himalayan bullfinches" (P. aurantiaca, P. erythaca, P. erythrocephala), and (3) "Eurasian bullfinches" (P. pyrrhula s.l.). Within the last group there are four different subgroups: (3a) P. (p.) murina, (3b) P. (p.) cineracea, (3c) P. (p.) griseiventris, and (3d) P. pyrrhula s.str. The centre of origin of the genus Pyrrhula was most probably Southeast Asia. Incomplete lineage sorting of both mitochondrial and nuclear genes is observed among two apparently good species (P. erythaca and P. erythrocephala) indicating a very recent speciation event within the Himalayan Mountain chain. According to our estimates, the Pyrrhula ancestors split from the Pinicola ancestors before the Pleistocene. Apart from the subsequent Pre-Pleistocene splits of the three ancestral main groups, most of the diversification of today's representatives probably took place during the past 600,000 years, possibly in interaction with Pleistocene refugia and successive colonization movements after the last glaciation. Thus our work confirms the traditional delimitation of the bullfinches towards the other members of the finch family Fringillidae and corroborates most of the classic intra-generic subdivisions.


Subject(s)
Evolution, Molecular , Finches/genetics , Phylogeny , Animals , Asia , Cell Nucleus/genetics , DNA, Mitochondrial/genetics , Europe , Finches/classification , Genetic Variation , Introns/genetics , RNA, Ribosomal, 16S/genetics , Sequence Analysis, DNA
2.
Appl Opt ; 36(30): 8042-9, 1997 Oct 20.
Article in English | MEDLINE | ID: mdl-18264334

ABSTRACT

Design and operation of a compact, portable, room-temperature mid-infrared gas sensor is reported. The sensor is based on continuous-wave difference-frequency generation (DFG) in bulk periodically poled lithium niobate at 4.6 mum, pumped by a solitary GaAlAs diode laser at 865 nm and a diode-pumped monolithic ring Nd:YAG laser at 1064.5 nm. The instrument was used for detection of CO in air at atmospheric pressure with 1 ppb precision (parts in 10(9), by mole fraction) and 0.6% accuracy for a signal averaging time of 10 s. It employed a compact multipass absorption cell with a 18-m path length and a thermoelectrically cooled HgCdTe detector. Precision was limited by residual interference fringes arising from scattering in the multipass cell. This is the first demonstration of a portable high-precision gas sensor based on diode-pumped DFG at room temperature. The use of an external-cavity diode laser can provide a tuning range of 700 cm(-1) and allow the detection of several trace gases, including N(2) O, CO(2), SO(2), H(2) CO, and CH(4).

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