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1.
Nat Commun ; 14(1): 2197, 2023 04 17.
Article in English | MEDLINE | ID: mdl-37069154

ABSTRACT

The Hsp90 molecular chaperone collaborates with the phosphorylated Cdc37 cochaperone for the folding and activation of its many client kinases. As with many kinases, the Hsp90 client kinase CRaf is activated by phosphorylation at specific regulatory sites. The cochaperone phosphatase PP5 dephosphorylates CRaf and Cdc37 in an Hsp90-dependent manner. Although dephosphorylating Cdc37 has been proposed as a mechanism for releasing Hsp90-bound kinases, here we show that Hsp90 bound kinases sterically inhibit Cdc37 dephosphorylation indicating kinase release must occur before Cdc37 dephosphorylation. Our cryo-EM structure of PP5 in complex with Hsp90:Cdc37:CRaf reveals how Hsp90 both activates PP5 and scaffolds its association with the bound CRaf to dephosphorylate phosphorylation sites neighboring the kinase domain. Thus, we directly show how Hsp90's role in maintaining protein homeostasis goes beyond folding and activation to include post translationally modifying its client kinases.


Subject(s)
Cell Cycle Proteins , HSP90 Heat-Shock Proteins , Humans , Cell Cycle Proteins/metabolism , Protein Binding , HSP90 Heat-Shock Proteins/metabolism , Molecular Chaperones/metabolism
2.
Sci Rep ; 9(1): 16947, 2019 11 18.
Article in English | MEDLINE | ID: mdl-31740740

ABSTRACT

The over-expression and aggregation of α-synuclein (αSyn) are linked to the onset and pathology of Parkinson's disease. Native monomeric αSyn exists in an intrinsically disordered ensemble of interconverting conformations, which has made its therapeutic targeting by small molecules highly challenging. Nonetheless, here we successfully target the monomeric structural ensemble of αSyn and thereby identify novel drug-like small molecules that impact multiple pathogenic processes. Using a surface plasmon resonance high-throughput screen, in which monomeric αSyn is incubated with microchips arrayed with tethered compounds, we identified novel αSyn interacting drug-like compounds. Because these small molecules could impact a variety of αSyn forms present in the ensemble, we tested representative hits for impact on multiple αSyn malfunctions in vitro and in cells including aggregation and perturbation of vesicular dynamics. We thereby identified a compound that inhibits αSyn misfolding and is neuroprotective, multiple compounds that restore phagocytosis impaired by αSyn overexpression, and a compound blocking cellular transmission of αSyn. Our studies demonstrate that drug-like small molecules that interact with native αSyn can impact a variety of its pathological processes. Thus, targeting the intrinsically disordered ensemble of αSyn offers a unique approach to the development of small molecule research tools and therapeutics for Parkinson's disease.


Subject(s)
Small Molecule Libraries/pharmacology , alpha-Synuclein/metabolism , Amyloid/antagonists & inhibitors , Amyloid/metabolism , Cell Line , Fluorescence Resonance Energy Transfer , High-Throughput Screening Assays/methods , Humans , Intrinsically Disordered Proteins/metabolism , Phagocytosis/drug effects , Protein Folding , Small Molecule Libraries/chemistry , Small Molecule Libraries/toxicity , Surface Plasmon Resonance , alpha-Synuclein/chemistry , alpha-Synuclein/drug effects
3.
Genetics ; 170(1): 161-71, 2005 May.
Article in English | MEDLINE | ID: mdl-15744054

ABSTRACT

Mutations that inactivate the retinoblastoma (Rb) pathway are common in human tumors. Such mutations promote tumor growth by deregulating the G1 cell cycle checkpoint. However, uncontrolled cell cycle progression can also produce new liabilities for cell survival. To uncover such liabilities in Rb mutant cells, we performed a clonal screen in the Drosophila eye to identify second-site mutations that eliminate Rbf(-) cells, but allow Rbf(+) cells to survive. Here we report the identification of a mutation in a novel highly conserved peptidyl prolyl isomerase (PPIase) that selectively eliminates Rbf(-) cells from the Drosophila eye.


Subject(s)
Drosophila melanogaster/embryology , Eye/embryology , Peptidylprolyl Isomerase/genetics , Retinoblastoma Protein/genetics , Amino Acid Sequence , Animals , Drosophila melanogaster/enzymology , Drosophila melanogaster/genetics , Eye/enzymology , Molecular Sequence Data , Mutation
4.
Nat Genet ; 36(3): 288-92, 2004 Mar.
Article in English | MEDLINE | ID: mdl-14981519

ABSTRACT

In fruit fly research, chromosomal deletions are indispensable tools for mapping mutations, characterizing alleles and identifying interacting loci. Most widely used deletions were generated by irradiation or chemical mutagenesis. These methods are labor-intensive, generate random breakpoints and result in unwanted secondary mutations that can confound phenotypic analyses. Most of the existing deletions are large, have molecularly undefined endpoints and are maintained in genetically complex stocks. Furthermore, the existence of haplolethal or haplosterile loci makes the recovery of deletions of certain regions exceedingly difficult by traditional methods, resulting in gaps in coverage. Here we describe two methods that address these problems by providing for the systematic isolation of targeted deletions in the D. melanogaster genome. The first strategy used a P element-based technique to generate deletions that closely flank haploinsufficient genes and minimize undeleted regions. This deletion set has increased overall genomic coverage by 5-7%. The second strategy used FLP recombinase and the large array of FRT-bearing insertions described in the accompanying paper to generate 519 isogenic deletions with molecularly defined endpoints. This second deletion collection provides 56% genome coverage so far. The latter methodology enables the generation of small custom deletions with predictable endpoints throughout the genome and should make their isolation a simple and routine task.


Subject(s)
DNA Transposable Elements , Drosophila melanogaster/genetics , Sequence Deletion , Animals , Genome , Mutagenesis, Insertional
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