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1.
Int Heart J ; 65(1): 55-62, 2024.
Article in English | MEDLINE | ID: mdl-38296580

ABSTRACT

Sudden unexpected death in the young (SUDY) is a traumatic occurrence for their family; however, information on the genetic variations associated with the condition is currently lacking. It is important to carry out postmortem genetic analyses in cases of sudden death to provide information for relatives and to allow appropriate genetic counselling and clinical follow-up. This study aimed to investigate the genetic variations associated with the occurrence of SUDY in Japan, using next-generation sequencing (NGS). The study included 18 cases of SUDY (16 males, 2 females; age 15-47 years) who underwent autopsy, including NGS DNA sequencing for molecular analysis. A total of 168 genes were selected from the sequencing panel and filtered, resulting in the identification of 60 variants in cardiac disease-related genes. Many of the cases had several of these genetic variants and some cases had a cardiac phenotype. The identification of genetic variants using NGS provides important information regarding the pathogenicity of sudden death.


Subject(s)
Death, Sudden, Cardiac , Heart Diseases , Male , Female , Humans , Adolescent , Young Adult , Adult , Middle Aged , Death, Sudden, Cardiac/epidemiology , Death, Sudden, Cardiac/etiology , Autopsy/methods , Phenotype , Genetic Variation/genetics , Genetic Testing
2.
Diagnostics (Basel) ; 13(13)2023 Jul 06.
Article in English | MEDLINE | ID: mdl-37443680

ABSTRACT

In a few cases, postmortem computed tomography angiography (PMCTA) is effective in postmortem detection of cortical artery rupture causing subdural hematoma (SDH), which is difficult to detect at autopsy. Here, we explore the usefulness and limitations of PMCTA in detecting the sites of cortical arterial rupture for SDH. In 6 of 10 cases, extravascular leakage of contrast material at nine different places enabled PMCTA to identify cortical arterial rupture. PMCTA did not induce destructive arterial artifacts, which often occur during autopsy. We found that, although not in all cases, PMCTA could show the site of cortical arterial rupture causing subdural hematoma in some cases. This technique is beneficial for cases of SDH autopsy, as it can be performed nondestructively and before destructive artifacts from the autopsy occur.

3.
Diagnostics (Basel) ; 12(11)2022 Nov 20.
Article in English | MEDLINE | ID: mdl-36428935

ABSTRACT

One of the causes of bleeding in subdural hematoma is cortical artery rupture, which is difficult to detect at autopsy. Therefore, reports of autopsy cases with this condition are limited and hence, the pathogenesis of subdural hematoma remains unclear. Herein, for the detection and morphological analysis of cortical artery ruptures as the bleeding sources of subdural hematoma, we used the tissue-clearing CUBIC (clear, unobstructed, brain/body imaging cocktails and computational analysis) method with light-sheet fluorescence microscopy and reconstructed the two-dimensional and three-dimensional images. Using the CUBIC method, we could clearly visualize and detect cortical artery ruptures that were missed by conventional methods. Indeed, the CUBIC method enables three-dimensional morphological analysis of cortical arteries including the ruptured area, and the creation of cross-sectional two-dimensional images in any direction, which are similar to histopathological images. This highlights the effectiveness of the CUBIC method for subdural hematoma analysis.

4.
Leg Med (Tokyo) ; 55: 102029, 2022 Mar.
Article in English | MEDLINE | ID: mdl-35121353

ABSTRACT

A Japanese man in his 30s died suddenly. Postmortem computed tomography and autopsy revealed a pulmonary embolism from an organizing thrombus in the inferior vena cava as the cause of death. Genomic analysis of congenital thrombophilia-related genes (i.e., SERPINC1, PROC, PROS1, F2, F5, PLG, and MTHFR) revealed a heterozygous variant of PROS1 (p.A139V), which has been reported in patients with congenital protein S deficiency. After a genetic conference that included forensic pathologists, molecular scientists, genetic researchers, genetic clinicians, and clinical physicians, the results of the genetic analysis were explained to the family. Biochemical analyses of protein S (PS) activity and total PS antigen levels were performed with samples from the deceased's family and genetic analysis was not performed until clinical symptoms appear. Herein we demonstrate the importance of genetic background in cases of a sudden death due to pulmonary embolism.


Subject(s)
Pulmonary Embolism , Vena Cava, Inferior , Autopsy , Death, Sudden/etiology , Humans , Male , Protein S , Pulmonary Embolism/genetics , Tomography, X-Ray Computed , Vena Cava, Inferior/diagnostic imaging
5.
Leg Med (Tokyo) ; 53: 101941, 2021 Nov.
Article in English | MEDLINE | ID: mdl-34293697

ABSTRACT

Acute subdural hematoma (SDH) occurs following severe head trauma with brain contusion or rupture of bridging veins. Conversely, SDH caused by rupture of a cortical artery without trauma or with minor trauma is also possible. Although over 180 cases of the latter SDH have been reported, they were predominantly diagnosed only during surgery, and therefore, no adequate histological evaluation has been performed. Therefore, essential etiology of this SDH type has remained unclear. In addition, the scarcity of autopsy cases may be attributed to arterial rupture being missed if the microscopic findings are too minimal to detect during autopsy. Here, we describe two autopsy cases of SDH of cortical artery origin. Extravasation on postmortem computed tomography angiography and arterial leakage on macroscopic observation during autopsy facilitated detection of the ruptured artery and allowed detailed histological evaluation of the ruptured artery and adjacent dura mater. The etiology of arterial rupture is briefly described on the basis of histopathological findings in this study and the available literature.


Subject(s)
Computed Tomography Angiography , Hematoma, Subdural, Acute , Arteries , Autopsy , Hematoma, Subdural/diagnostic imaging , Hematoma, Subdural, Acute/diagnostic imaging , Humans
6.
Jpn J Radiol ; 37(7): 534-542, 2019 Jul.
Article in English | MEDLINE | ID: mdl-31069621

ABSTRACT

PURPOSE: To clarify an early postmortem change, we investigated the volume changes of the spleen and kidney on postmortem CT compared with antemortem CT in the same patients. MATERIALS AND METHODS: We retrospectively evaluated the volumes of 56 spleens (56 cases) and 50 kidneys (25 cases) using antemortem and postmortem CT, which were performed within 168 min after death. We divided the cases of spleen analysis into a hemorrhagic group (n = 12) and a non-hemorrhagic group (n = 44). RESULTS: The volumes of the organs before and after death were 101.0 ± 70.9 (cm3, mean ± standard deviation) and 81.1 ± 57.8 in spleens, 120.3 ± 49.2 and 109.2 ± 39.2 in kidneys, respectively. Both spleens and kidneys shrank after death (p < 0.05). The volumes of spleens before and after death were 111 ± 66.5 and 67.5 ± 27.7 in the hemorrhagic group, and 98.2 ± 72.5 and 84.9 ± 63.3 in the non-hemorrhagic group, respectively. The median value of the ratio of postmortem splenic volume to antemortem volume in the hemorrhagic group (65.0%) was smaller than the one in the non-hemorrhagic group (90.5%) (p < 0.05). CONCLUSION: We demonstrated that spleens and kidneys significantly reduced in size after death. The rate of shrinkage of spleens in the hemorrhagic group significantly became larger than the one in the non-hemorrhagic group.


Subject(s)
Kidney/diagnostic imaging , Postmortem Changes , Spleen/diagnostic imaging , Tomography, X-Ray Computed/methods , Adult , Aged , Aged, 80 and over , Autopsy , Female , Humans , Male , Middle Aged , Retrospective Studies
7.
Leg Med (Tokyo) ; 38: 77-82, 2019 May.
Article in English | MEDLINE | ID: mdl-31030121

ABSTRACT

This report describes the autopsy case of a 4-year-old boy who died from hepatic hemorrhage and rupture caused by peliosis hepatis with X-linked myotubular myopathy. Peliosis hepatis is characterized by multiple blood-filled cavities of various sizes in the liver, which occurs in chronic wasting disease or with the use of specific drugs. X-linked myotubular myopathy is one of the most serious types of congenital myopathies, in which an affected male infant typically presents with severe hypotonia and respiratory distress immediately after birth. Although each disorder is rare, 12 cases of pediatric peliosis hepatis associated with X-linked myotubular myopathy have been reported, including our case. Peliosis hepatis should be considered as a cause of hepatic hemorrhage despite its low incidence, and it requires adequate gross and histological investigation for correct diagnosis.


Subject(s)
Autopsy , Forensic Pathology , Liver/pathology , Myopathies, Structural, Congenital/pathology , Peliosis Hepatis/pathology , Child, Preschool , Hemorrhage/diagnostic imaging , Hemorrhage/etiology , Hemorrhage/pathology , Humans , Liver/diagnostic imaging , Liver Diseases/diagnostic imaging , Liver Diseases/etiology , Liver Diseases/pathology , Male , Myopathies, Structural, Congenital/complications , Myopathies, Structural, Congenital/diagnostic imaging , Peliosis Hepatis/complications , Peliosis Hepatis/diagnostic imaging , Rupture, Spontaneous/diagnostic imaging , Rupture, Spontaneous/etiology , Rupture, Spontaneous/pathology , Tomography, X-Ray Computed
8.
Parasitol Int ; 70: 1-4, 2019 Jun.
Article in English | MEDLINE | ID: mdl-30630115

ABSTRACT

Yearly, several reports of unknown boats and corpses brought by the Tsushima Current are found ashore Japanese coast. Niigata prefecture had the highest number of the drifting ashore corpses in Japan with 45.7% (16/35) in 2017. Corpses from North Korea, confirmed by documents and photos were autopsied and in 3/16 was possible to recover worms full of eggs, morphologically identified as ascarids. Further molecular analysis of ITS1, 5.8S rDNA and ITS2 sequences confirmed all specimens were Ascaris lumbricoides. The contamination level by Ascaris lumbricoides eggs in the coast, the health impact and consequences of the epidemiological bridging produced by this forced migration in public health should be investigated. Moreover, control of helminthiases might be a necessary task in North Korea.


Subject(s)
Ascariasis/epidemiology , Ascaris lumbricoides/genetics , Cadaver , Communicable Diseases, Imported/parasitology , Forensic Pathology , Animals , Ascariasis/transmission , Ascaris lumbricoides/isolation & purification , Autopsy , Communicable Diseases, Imported/transmission , DNA, Ribosomal/genetics , Democratic People's Republic of Korea/epidemiology , Humans , Japan , Public Health , Ships , Transients and Migrants
9.
Forensic Sci Int ; 296: 22-27, 2019 Mar.
Article in English | MEDLINE | ID: mdl-30641441

ABSTRACT

BACKGROUND: Measurement of heart weight is important when investigating cause of death, but there is presently no satisfactory method of heart weight estimation by postmortem computed tomography (PMCT). METHOD: We investigated 33 consecutive cases that underwent both PMCT and autopsy between February 2008 and June 2014. Heart and left ventricular (LV) weights were calculated by PMCT morphometry. We used a simple method to estimate LV weight: We assumed that LV was an ellipsoid and multiplied its volume on PMCT with myocardial specific gravity. We then compared the various heart and LV weights using linear regression. The calculated and estimated LV weights on PMCT were also compared. RESULTS: It was not possible to predict heart weight at autopsy from PMCT (R2 = 0.53). However, heart weight at autopsy could be accurately predicted from LV weight calculated by PMCT (R2 = 0.77). In addition, there was a strong correlation between the estimated and calculated LV weights by PMCT (R2 = 0.92). Heart weight at autopsy could also be accurately predicted using the PMCT-estimated LV weight (R2 = 0.72). CONCLUSION: Heart weight at autopsy could be accurately predicted using a simple method in which LV volume was assumed to be an ellipsoid on PMCT.


Subject(s)
Heart/diagnostic imaging , Multidetector Computed Tomography , Myocardium/pathology , Organ Size , Adolescent , Adult , Aged , Aged, 80 and over , Autopsy , Child , Female , Forensic Pathology , Heart Ventricles/diagnostic imaging , Heart Ventricles/pathology , Humans , Linear Models , Male , Middle Aged , Retrospective Studies , Young Adult
10.
Leg Med (Tokyo) ; 23: 95-98, 2016 Nov.
Article in English | MEDLINE | ID: mdl-27890112

ABSTRACT

A foreign body impacted in the esophagus is not a rare incident among adults or children. In adults, a dental prosthesis is prone to become impacted in the esophagus. The diagnostic difficulty of this often causes a delay in its removal, which can lead to serious complications, including death. This report describes the autopsy case of a man who died of prolonged asphyxiation induced by the delayed removal of an impacted denture, which was misdiagnosed on his first visit notwithstanding that a part of the denture could be seen on X-rays. Cases in which an impacted denture led to death have rarely been reported in contrast to numerous papers about recovered cases.


Subject(s)
Asphyxia/etiology , Asphyxia/pathology , Autopsy , Denture, Partial, Removable/adverse effects , Esophagus/pathology , Foreign Bodies/complications , Alcoholism , Cause of Death , Humans , Male , Middle Aged , Pleural Effusion/pathology , Rupture
11.
PLoS One ; 9(2): e88846, 2014.
Article in English | MEDLINE | ID: mdl-24586411

ABSTRACT

BACKGROUND: CpG oligodeoxynucleotides (ODNs), resembling bacterial DNA, are currently tested in clinical trials as vaccine adjuvants. They have the nuclease-resistant phosphorothioate bond; the immune responses elicited differ according to the CpG ODN sequence and vaccination method. To develop a CpG ODN that can induce plasmacytoid dendritic cell (pDC)-mediated T(H)1 immunity through the mucosa, we constructed phosphodiester G9.1 comprising one palindromic CpG motif with unique polyguanosine-runs that allows degradation similar to naturally occurring bacterial DNA. METHODS: T(H)1 and T(H)2 immunity activation was evaluated by cytokine production pattern and T-bet/GATA-3 ratio in human peripheral blood mononuclear cells and mouse bone marrow cells. Adjuvanticity was evaluated in mice administered G9.1 with diphtheria toxoid (DT) through nasal vaccination. RESULTS: G9.1 exhibited stronger IFN-α-inducing activity than A-class CpG ODN2216 and increased T-bet/GATA-3 ratio by enhancing T-bet expression. Nasally administered G9.1 plus DT induced DT-specific mucosal IgA and serum IgG, but not IgE, responses with antitoxin activity in C57BL/6 and BALB/c mice, possibly due to IFN/BAFF production. Induction of T(H)1, but not T(H)2-type Abs depended completely on pDCs, the first in vivo demonstration by CpG ODNs. CONCLUSIONS: G9.1 is a promising mucosal adjuvant for induction of pDC-mediated T(H)1 immunity.


Subject(s)
Adjuvants, Immunologic/pharmacology , Adjuvants, Pharmaceutic/pharmacology , Dendritic Cells/immunology , Mucous Membrane/immunology , Oligodeoxyribonucleotides/immunology , Th1 Cells/immunology , Animals , Bone Marrow Cells/drug effects , Bone Marrow Cells/immunology , DNA, Bacterial/immunology , Dendritic Cells/drug effects , Diphtheria Toxoid/immunology , Female , Humans , Interferon-alpha/immunology , Leukocytes, Mononuclear/drug effects , Leukocytes, Mononuclear/immunology , Mice , Mice, Inbred BALB C , Mice, Inbred C57BL , Mucous Membrane/drug effects , Th1 Cells/drug effects
12.
Forensic Sci Int ; 225(1-3): 27-31, 2013 Feb 10.
Article in English | MEDLINE | ID: mdl-22656269

ABSTRACT

PURPOSE: The purpose of this study is to evaluate the postmortem deformation of the aorta on postmortem computed tomography (CT) by comparison with the antemortem CT in the same patient. MATERIALS AND METHODS: A total of 58 non-traumatic patients without hemorrhagic events who underwent torso CT before and shortly after death were enrolled. Antemortem chest and abdominal CT were obtained in 44 cases and in 57 cases, respectively. The lengths of the major and minor axes of the ascending and descending thoracic aorta and the abdominal aorta were measured on both antemortem and postmortem CT in the same patient. To evaluate the shape of the aorta, the major axis-minor axis ratio (Ma-MiR) was calculated. Mean values of the diameters of the aorta and Ma-MiRs on postmortem CT were compared with those on antemortem CT using the Wilcoxon signed-rank test. We also evaluated the major and minor axes and Ma-MiRs on both antemortem and postmortem CT in two age groups: 65 years and under (n=13) and over 65 years (n=45). RESULTS: At each level tested, the aorta significantly shrank after death (p<0.001) (ascending thoracic aorta, descending thoracic aorta, and abdominal aorta: 38.5 mm × 33.5 mm, 28.0 mm × 25.9 mm, and 24.4 mm × 21.8 mm on antemortem CT, 30.0 mm × 26.2 mm, 24.4 mm × 20.7 mm, and 21.5 mm × 14.5 mm on postmortem CT, respectively). The postmortem Ma-MiRs significantly increased at the descending thoracic aorta and the abdominal aorta (p<0.001). The diameters of the aorta are longer in older cases at all levels on both antemortem and postmortem CT. The reduction rates were larger in younger cases than older cases at all levels. CONCLUSIONS: After death, the aorta shrunk at all levels, and became oval in shape in descending thoracic and abdominal aorta. The contraction was greater in younger cases than older cases. Investigators who interpret postmortem imaging should be aware of the postmortem deformation of the aorta.


Subject(s)
Aorta/pathology , Aortography , Multidetector Computed Tomography , Postmortem Changes , Adolescent , Adult , Age Factors , Aged , Aged, 80 and over , Female , Forensic Pathology , Humans , Male , Middle Aged , Retrospective Studies , Young Adult
13.
Leg Med (Tokyo) ; 11 Suppl 1: S408-10, 2009 Apr.
Article in English | MEDLINE | ID: mdl-19264525

ABSTRACT

Cytochrome P450 (CYP) 1A1, glutathione S-transferase (GST) M1, and GSTT1 gene polymorphisms have been shown to be associated with several diseases. In this study, CYP1A1 MspI, GSTM1 and GSTT1 gene polymorphisms were investigated in 134 Ovambo and 207 Mongolians, and the results were compared with those from previous studies. Using polymerase chain reaction/restriction fragment length polymorphism (PCR-RFLP) the frequency of CYP1A1 MspI mutation was determined. The multiplex PCR was used to determine the GSTM1 and GSTT1 polymorphism. The frequencies of wild-type, heterozygous variant and homozygous variant of the CYP1A1 MspI genotypes were 72.4%, 25.4% and 2.2%, and 22.7%, 55.6% and 21.7% in the Ovambos and Mongolians, respectively. The frequencies of GSTM1 (null) and GSTT1 (null) genotypes were 11.2% and 35.8%, and 46.4% and 25.6% in the Ovambos and Mongolians, respectively. The CYP1A1 MspI and GSTT1 (null) genotype distribution of the Ovambos was similar to that of African-Americans and some Caucasians. In contrast, the GSTM1 (null) genotype distribution was different from that of all other populations. Among Mongolians, the CYP1A1 MspI polymorphism showed the highest mutation frequencies, GSTM1 (null) was similar to that of East Asians, and GSTT1 (null) was different from that of almost all the Asians examined.


Subject(s)
Asian People/genetics , Cytochrome P-450 CYP1A1/genetics , Ethnicity/genetics , Glutathione Transferase/genetics , Polymorphism, Genetic , Gene Frequency , Genetics, Population , Genotype , Humans , Mongolia , Namibia , Polymerase Chain Reaction
14.
J Anal Toxicol ; 33(2): 85-91, 2009 Mar.
Article in English | MEDLINE | ID: mdl-19239733

ABSTRACT

This paper presents the extraction and analysis of chlorhexidine (CHX) from whole blood using solid-phase extraction (SPE) together with high-performance liquid chromatography (HPLC). Blood samples, spiked with chlorpromazine used as an internal standard, were fortified with sodium acetate buffer and purified with Bakerbond C(18) SPE columns. The columns were washed, dried, and eluted with experimental optimized solvent systems. The HPLC was performed using a Capcell Pak C(18) MG column (4.6 x 250-mm) and monitored at 260 nm, using a UV detector. A mobile phase consisting of acetonitrile/water (40:60 v/v), containing 0.05% trifluoroacetic acid, 0.05% heptafluorobutyric acid, and 0.1% triethylamine, was employed. The assay was linear over the range of 0.05 to 2.0 microg/g and the limit of detection was 0.01 microg/g for CHX in whole blood. At the concentration range of 0.05 to 2.0 microg/g, the recoveries ranged from 72% to 85%, and the intra- and interday precision, expressed as coefficient of variation, were less than 11% and 13%, respectively. Kinetic characteristics following an intravenous infusion of a CHX product, Maskin solution, at a dose of 15 mg/kg in rats were evaluated using the present method. The kinetic profiles of CHX conformed to a two-compartment model with an alpha half-life (of distribution) at 0.05 h and a beta half-life (of elimination) at 0.55 h in rats. The method is simple and reliable for the determination of CHX in blood samples and could be expected to apply to forensic and clinical specimens.


Subject(s)
Anti-Infective Agents, Local/blood , Chlorhexidine/blood , Forensic Toxicology/methods , Animals , Anti-Infective Agents, Local/pharmacokinetics , Anti-Infective Agents, Local/poisoning , Area Under Curve , Chlorhexidine/pharmacokinetics , Chlorhexidine/poisoning , Chromatography, High Pressure Liquid , Half-Life , Infusions, Intravenous , Male , Metabolic Clearance Rate , Poisoning/blood , Rats , Rats, Sprague-Dawley , Reference Standards , Reproducibility of Results , Sensitivity and Specificity , Solid Phase Extraction
15.
Clin Chem Lab Med ; 47(1): 51-5, 2009.
Article in English | MEDLINE | ID: mdl-19055475

ABSTRACT

BACKGROUND: The single nucleotide polymorphism (SNP) at deoxyribonuclease I (DNase I) in exon 8 (A2317G: Gln222Arg) has been shown to be associated with several diseases. METHODS: The allele frequency of the DNASE1 polymorphism in Chinese (Shenyang and Guangzhou in China), Uygurs (Urumqi), Tamils (Sri Lanka), and Tibetans (Katmandu in Nepal) was investigated, and the results were compared with those of other studies. RESULTS: This study revealed that DNASE1*1 is more common in Africans and DNASE1*2 is more common in Caucasians. Expression vectors of DNASE1*1 and DNASE1*2 were constructed and compared to the enzyme properties secreted into a medium from transfected COS-7 cells. The activity of the type-2 enzyme was significantly higher than that of the type-1 enzyme. In addition, the type-1 enzyme was heat-labile when compared to the type-2 enzyme. Moreover, the optimum pH of the DNase I type-2 enzyme was more acidic than that of DNase I type-1. CONCLUSIONS: This study revealed that the distribution of Gln222Arg in the DNASE1 gene is different among ethnic groups and that the DNASE1 polymorphism appears to affect the specific activity, heat sensitivity, and optimum pH of the DNase I enzyme.


Subject(s)
Asian People/genetics , Deoxyribonuclease I/genetics , Polymorphism, Single Nucleotide , Animals , COS Cells , Chlorocebus aethiops , Deoxyribonuclease I/biosynthesis , Deoxyribonuclease I/metabolism , Gene Frequency , Genetics, Population , Humans , Hydrogen-Ion Concentration
16.
Biosci Biotechnol Biochem ; 72(12): 3197-205, 2008 Dec.
Article in English | MEDLINE | ID: mdl-19060393

ABSTRACT

Deoxyribonuclease I (DNase I) is known to be a glycoprotein, and two potential N-linked glycosylation sites (N18 and N106) are known for mammalian enzymes. In the present study, N18 and N106 were mutated in order to investigate the biological role of N-linked glycosylation in three mammalian (human, bovine, and equine) DNases I. The enzyme activities of N18Q and N106Q were lower than that of the wild type, and that of the double mutant (N18Q/N106Q) was lower than those of the single mutants, in accord with the sugar moiety contents in the three mammals. In addition, all mutant enzymes were unstable to heat, suggesting that both sites are required for heat stability. Moreover, in human and equine enzymes, the N18Q and N106Q mutant enzymes were less resistant to trypsin, while N18Q/N106Q was the most sensitive to trypsin. As for bovine DNase I, the trypsin resistance of N18Q and N106Q was similar to that of the wild type, but that of N18Q/N106Q decreased in a time-dependent manner. On the other hand, N-linked glycosylation was not related to pH sensitivity. The results of the present study suggest that N18 and N106 are both necessary for (i) full enzymatic activity, (ii) heat-stability, and (iii) trypsin resistance.


Subject(s)
Asparagine , Deoxyribonuclease I/chemistry , Deoxyribonuclease I/metabolism , Hot Temperature , Amino Acid Sequence , Animals , COS Cells , Cattle , Chlorocebus aethiops , Deoxyribonuclease I/genetics , Enzyme Stability , Gene Expression Regulation, Enzymologic , Glycosylation , Horses , Humans , Hydrogen-Ion Concentration , Molecular Sequence Data , Mutagenesis, Site-Directed , Mutation , Sequence Alignment
17.
Cell Biochem Funct ; 26(7): 813-6, 2008 Oct.
Article in English | MEDLINE | ID: mdl-18729130

ABSTRACT

Human cytochrome P450 2J2 (CYP2J2) is abundant in cardiovascular tissue and active in the metabolism of arachidonic acid to eicosanoids that have potent vasodilatory properties. Variability of the CYP2J2 gene is highly constrained except for its proximal promoter: there is a relatively common and functionally relevant single nucleotide polymorphism, indicated by -50G > T polymorphism (CYP2J2*7). Although genetic variation is known among ethnic groups, data for allele frequency are limited to a few Caucasian, Asian, and one African populations. In the present study, genotype distribution of CYP2J2*7 polymorphisms was investigated using polymerase chain reaction and restriction fragment length polymorphism assay in Japanese (n = 338), Mongolian (n = 118), and Ovambo (n = 186) populations and the findings compared with other populations. The mutant (CYP2J2*7) frequencies in the Japanese, Mongolians, and Ovambos were 0.0621, 0.0339, and 0.0672, respectively. Except for the Taiwanese, a general uniformity in the polymorphism in the Asian populations was observed. The mutation frequency of Ovambos was relatively lower than that of the African-American population. This study is the first to investigate the distribution of the CYP2J2*7 gene polymorphisms in Japanese, Mongolians, and Ovambos. These data will be informative and facilitate genetic association studies, in Asian and African populations for CYP2J2-related diseases such as cardiovascular disorders.


Subject(s)
Asian People/genetics , Black People/genetics , Cytochrome P-450 Enzyme System/genetics , Polymorphism, Single Nucleotide/genetics , China , Cytochrome P-450 CYP2J2 , Gene Frequency , Humans , Japan
18.
Cell Biochem Funct ; 26(6): 718-22, 2008 Aug.
Article in English | MEDLINE | ID: mdl-18636464

ABSTRACT

Angiogenin and ribonuclease 2 (RNase 2) are members of the human RNase superfamily. Although three potential single nucleotide polymorphisms (SNPs) in these genes, which could give rise to an amino acid substitution in the protein, have been identified, relevant population data are not available, and accordingly they have not been applied to clinical-genetic analysis. For this purpose, a novel genotyping method for each SNP using the mismatched PCR-restriction fragment length polymorphism technique has been developed. Using this method, the genotype distribution of each SNP was investigated in six populations: Japanese (n = 167), Korean (n = 90), Mongolian (n = 92), Ovambos (n = 86), Turkish (n = 87), and German (n = 70). In all the populations, only one genotype was found in each SNP. Irrespective of differences in ethnic groups, the angiogenin and RNase 2 genes appear to exhibit markedly less genetic heterogeneity with regard to these SNPs.


Subject(s)
Amino Acid Substitution , Endoribonucleases/genetics , Genetics, Population , Polymorphism, Single Nucleotide , Ribonuclease, Pancreatic/genetics , Asian People/genetics , Black People/genetics , Gene Frequency , Genotype , Humans , White People/genetics
19.
Leg Med (Tokyo) ; 9(5): 233-6, 2007 Sep.
Article in English | MEDLINE | ID: mdl-17320453

ABSTRACT

Deoxyribonuclease I (DNase I) plays important roles for DNA fragmentation and degradation during programmed cell death. The single nucleotide polymorphism (SNP) at DNase I, designated as DNASE1, in exon 8 (A2317G) is considered to be one of the susceptibility genes for gastric and colorectal carcinoma and myocardial infarction. Recent research has shown the presence of a novel 56-bp variable number of tandem repeat (VNTR) polymorphism in intron 4 at DNase I, designated as HumDN1. In the present study, DNASE1 and HumDN1polymorphisms and serum DNase I activities in each different genotype were investigated in 137 Japanese populations. The allele frequencies of A and G in DNASE1 were 0.5839 and 0.4161, respectively. The allelic frequencies of alleles 2, 3, 4, and 5 in HumDN1 were 0.0219, 0.5803, 0.2226, and 0.1752, respectively. In the DNASE1 polymorphism, the activities of genotypes GG and AG were significantly higher than that of AA. As for the HumDN1 polymorphism, the activity of genotype 55 was significantly higher than the activities of 33 and 34. In addition, a significant difference was observed between haplotypes AA/33 and GG/55. The analysis of the correlation between genotype and DNase I activity may be potentially useful for clinical purposes.


Subject(s)
Asian People/genetics , Deoxyribonuclease I/genetics , Polymorphism, Single Nucleotide , Deoxyribonuclease I/blood , Female , Gene Frequency , Genetics, Population , Genotype , Haplotypes , Humans , Japan , Male , Polymerase Chain Reaction , Tandem Repeat Sequences
20.
J Immunol ; 177(7): 4841-52, 2006 Oct 01.
Article in English | MEDLINE | ID: mdl-16982926

ABSTRACT

CpG DNA induces plasmacytoid dendritic cells (pDC) to produce type I IFN and chemokines. However, it has not been fully elucidated how the TLR9 signaling pathway is linked to these gene expressions. We examined the mechanisms involving the TLR9 and type I IFN signaling pathways, in relation to CpG DNA-induced IFN-alpha, IFN regulatory factor (IRF)-7, and chemokines CXCL10 and CCL3 in human pDC. In pDC, NF-kappaB subunits p65 and p50 were constitutively activated. pDC also constitutively expressed IRF-7 and CCL3, and the gene expressions seemed to be regulated by NF-kappaB. CpG DNA enhanced the NF-kappaB p65/p50 activity, which collaborated with p38 MAPK to up-regulate the expressions of IRF-7, CXCL10, and CCL3 in a manner independent of type I IFN signaling. We then examined the pathway through which IFN-alpha is expressed. Type I IFN induced the expression of IRF-7, but not of IFN-alpha, in a NF-kappaB-independent way. CpG DNA enabled the type I IFN-treated pDC to express IFN-alpha in the presence of NF-kappaB/p38 MAPK inhibitor, and chloroquine abrogated this effect. With CpG DNA, IRF-7, both constitutively and newly expressed, moved to the nuclei independently of NF-kappaB/p38 MAPK. These findings suggest that, in CpG DNA-stimulated human pDC, the induction of IRF-7, CXCL10, and CCL3 is mediated by the NF-kappaB/p38 MAPK pathway, and that IRF-7 is activated upstream of the activation of NF-kappaB/p38 MAPK in chloroquine-sensitive regulatory machinery, thereby leading to the expression of IFN-alpha.


Subject(s)
Chemokines/biosynthesis , CpG Islands/immunology , Dendritic Cells/metabolism , NF-kappa B/metabolism , Signal Transduction/immunology , p38 Mitogen-Activated Protein Kinases/metabolism , Blotting, Western , Dendritic Cells/immunology , Enzyme-Linked Immunosorbent Assay , Flow Cytometry , Gene Expression , Humans , Interferon Regulatory Factor-7/immunology , Interferon Regulatory Factor-7/metabolism , Interferon-alpha/immunology , Interferon-alpha/metabolism , NF-kappa B/immunology , Reverse Transcriptase Polymerase Chain Reaction , Toll-Like Receptor 9/immunology , Toll-Like Receptor 9/metabolism , p38 Mitogen-Activated Protein Kinases/immunology
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