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1.
bioRxiv ; 2024 Jun 13.
Article in English | MEDLINE | ID: mdl-38915496

ABSTRACT

The basic excitatory neurons of the cerebral cortex, the pyramidal cells, are the most important signal integrators for the local circuit. They have quite characteristic morphological and electrophysiological properties that are known to be largely constant with age in the young and adult cortex. However, the brain undergoes several dynamic changes throughout life, such as in the phases of early development and cognitive decline in the aging brain. We set out to search for intrinsic cellular changes in supragranular pyramidal cells across a broad age range: from birth to 85 years of age and we found differences in several biophysical properties between defined age groups. During the first year of life, subthreshold and suprathreshold electrophysiological properties changed in a way that shows that pyramidal cells become less excitable with maturation, but also become temporarily more precise. According to our findings, the morphological features of the three-dimensional reconstructions from different life stages showed consistent morphological properties and systematic dendritic spine analysis of an infantile and an old pyramidal cell showed clear significant differences in the distribution of spine shapes. Overall, the changes that occur during development and aging may have lasting effects on the properties of pyramidal cells in the cerebral cortex. Understanding these changes is important to unravel the complex mechanisms underlying brain development, cognition and age-related neurodegenerative diseases.

2.
J Biotechnol ; 389: 1-12, 2024 Jun 20.
Article in English | MEDLINE | ID: mdl-38697361

ABSTRACT

Aging is associated with the slowdown of neuronal processing and cognitive performance in the brain; however, the exact cellular mechanisms behind this deterioration in humans are poorly elucidated. Recordings in human acute brain slices prepared from tissue resected during brain surgery enable the investigation of neuronal changes with age. Although neocortical fast-spiking cells are widely implicated in neuronal network activities underlying cognitive processes, they are vulnerable to neurodegeneration. Herein, we analyzed the electrical properties of 147 fast-spiking interneurons in neocortex samples resected in brain surgery from 106 patients aged 11-84 years. By studying the electrophysiological features of action potentials and passive membrane properties, we report that action potential overshoot significantly decreases and spike half-width increases with age. Moreover, the action potential maximum-rise speed (but not the repolarization speed or the afterhyperpolarization amplitude) significantly changed with age, suggesting a particular weakening of the sodium channel current generated in the soma. Cell passive membrane properties measured as the input resistance, membrane time constant, and cell capacitance remained unaffected by senescence. Thus, we conclude that the action potential in fast-spiking interneurons shows a significant weakening in the human neocortex with age. This may contribute to the deterioration of cortical functions by aging.


Subject(s)
Action Potentials , Aging , Interneurons , Neocortex , Humans , Neocortex/physiology , Neocortex/cytology , Aged , Interneurons/physiology , Aged, 80 and over , Adult , Aging/physiology , Adolescent , Child , Middle Aged , Action Potentials/physiology , Male , Young Adult , Female
3.
Sci Adv ; 9(41): eade4511, 2023 10 13.
Article in English | MEDLINE | ID: mdl-37824608

ABSTRACT

Neural population activity determines the timing of synaptic inputs, which arrive to dendrites, cell bodies, and axon initial segments (AISs) of cortical neurons. Action potential initiation in the AIS (AIS-APs) is driven by input integration, and the phase preference of AIS-APs during network oscillations is characteristic to cell classes. Distal regions of cortical axons do not receive synaptic inputs, yet experimental induction protocols can trigger retroaxonal action potentials (RA-APs) in axons distal from the soma. We report spontaneously occurring RA-APs in human and rodent cortical interneurons that appear uncorrelated to inputs and population activity. Network-linked triggering of AIS-APs versus input-independent timing of RA-APs of the same interneurons results in disparate temporal contribution of a single cell to in vivo network operation through perisomatic and distal axonal firing.


Subject(s)
Axon Initial Segment , Neocortex , Humans , Action Potentials/physiology , Neocortex/physiology , Dendrites/physiology , Axons/physiology
4.
Stud Health Technol Inform ; 301: 77-82, 2023 May 02.
Article in English | MEDLINE | ID: mdl-37172157

ABSTRACT

BACKGROUND: Aphasia describes the lack of the already gained ability to use language in a common way. "Language" here covers all variations of forming or understanding messages. OBJECTIVES: The APH-Alarm project aims to develop a service concept that provides alternative communication options for people with Aphasia to trigger timely help when needed. It considers that a typical user may not be familiar with modern technologies and offers several simple and intuitive options. METHODS: The approach is based on event detection of gestures (during daytime or in bed), movement pattern recognition in bed, and an easy-to-use pictogram-based smartphone app. RESULTS: Agile evaluation of the smartphone app showed a promising outcome. CONCLUSION: The idea of a versatile and comprehensive solution for aphasic people to easily contact private or public helpers based on their actions or automatic detection is promising and will be further investigated in an upcoming field trial.


Subject(s)
Aphasia , Communication Aids for Disabled , Mobile Applications , Humans , Language , Gestures
5.
Sensors (Basel) ; 23(4)2023 Feb 10.
Article in English | MEDLINE | ID: mdl-36850569

ABSTRACT

Speech is the most spontaneous and natural means of communication. Speech is also becoming the preferred modality for interacting with mobile or fixed electronic devices. However, speech interfaces have drawbacks, including a lack of user privacy; non-inclusivity for certain users; poor robustness in noisy conditions; and the difficulty of creating complex man-machine interfaces. To help address these problems, the Special Issue "Future Speech Interfaces with Sensors and Machine Intelligence" assembles eleven contributions covering multimodal and silent speech interfaces; lip reading applications; novel sensors for speech interfaces; and enhanced speech inclusivity tools for future speech interfaces. Short summaries of the articles are presented, followed by an overall evaluation. The success of this Special Issue has led to its being re-issued as "Future Speech Interfaces with Sensors and Machine Intelligence-II" with a deadline in March of 2023.


Subject(s)
Communication , Speech , Humans , Artificial Intelligence , Electronics , Privacy
6.
PLoS Biol ; 21(2): e3002001, 2023 02.
Article in English | MEDLINE | ID: mdl-36745683

ABSTRACT

Accumulating evidence indicates that there are substantial species differences in the properties of mammalian neurons, yet theories on circuit activity and information processing in the human brain are based heavily on results obtained from rodents and other experimental animals. This knowledge gap may be particularly important for understanding the neocortex, the brain area responsible for the most complex neuronal operations and showing the greatest evolutionary divergence. Here, we examined differences in the electrophysiological properties of human and mouse fast-spiking GABAergic basket cells, among the most abundant inhibitory interneurons in cortex. Analyses of membrane potential responses to current input, pharmacologically isolated somatic leak currents, isolated soma outside-out patch recordings, and immunohistochemical staining revealed that human neocortical basket cells abundantly express hyperpolarization-activated cyclic nucleotide-gated cation (HCN) channel isoforms HCN1 and HCN2 at the cell soma membrane, whereas these channels are sparse at the rodent basket cell soma membrane. Antagonist experiments showed that HCN channels in human neurons contribute to the resting membrane potential and cell excitability at the cell soma, accelerate somatic membrane potential kinetics, and shorten the lag between excitatory postsynaptic potentials and action potential generation. These effects are important because the soma of human fast-spiking neurons without HCN channels exhibit low persistent ion leak and slow membrane potential kinetics, compared with mouse fast-spiking neurons. HCN channels speed up human cell membrane potential kinetics and help attain an input-output rate close to that of rodent cells. Computational modeling demonstrated that HCN channel activity at the human fast-spiking cell soma membrane is sufficient to accelerate the input-output function as observed in cell recordings. Thus, human and mouse fast-spiking neurons exhibit functionally significant differences in ion channel composition at the cell soma membrane to set the speed and fidelity of their input-output function. These HCN channels ensure fast electrical reactivity of fast-spiking cells in human neocortex.


Subject(s)
Neocortex , Humans , Mice , Animals , Cyclic Nucleotide-Gated Cation Channels/pharmacology , Cyclic Nucleotide-Gated Cation Channels/physiology , Hyperpolarization-Activated Cyclic Nucleotide-Gated Channels , Neurons/physiology , Interneurons/physiology , Mammals
7.
Cereb Cortex ; 33(5): 2101-2142, 2023 02 20.
Article in English | MEDLINE | ID: mdl-35667019

ABSTRACT

Diverse neocortical GABAergic neurons specialize in synaptic targeting and their effects are modulated by presynaptic metabotropic glutamate receptors (mGluRs) suppressing neurotransmitter release in rodents, but their effects in human neocortex are unknown. We tested whether activation of group III mGluRs by L-AP4 changes GABAA receptor-mediated spontaneous inhibitory postsynaptic currents (sIPSCs) in 2 distinct dendritic spine-innervating GABAergic interneurons recorded in vitro in human neocortex. Calbindin-positive double bouquet cells (DBCs) had columnar "horsetail" axons descending through layers II-V innervating dendritic spines (48%) and shafts, but not somata of pyramidal and nonpyramidal neurons. Parvalbumin-expressing dendrite-targeting cell (PV-DTC) axons extended in all directions innervating dendritic spines (22%), shafts (65%), and somata (13%). As measured, 20% of GABAergic neuropil synapses innervate spines, hence DBCs, but not PV-DTCs, preferentially select spine targets. Group III mGluR activation paradoxically increased the frequency of sIPSCs in DBCs (to median 137% of baseline) but suppressed it in PV-DTCs (median 92%), leaving the amplitude unchanged. The facilitation of sIPSCs in DBCs may result from their unique GABAergic input being disinhibited via network effect. We conclude that dendritic spines receive specialized, diverse GABAergic inputs, and group III mGluRs differentially regulate GABAergic synaptic transmission to distinct GABAergic cell types in human cortex.


Subject(s)
Neocortex , Receptors, Metabotropic Glutamate , Humans , Neocortex/metabolism , Parvalbumins/metabolism , Receptors, Metabotropic Glutamate/metabolism , Interneurons/physiology , Synaptic Transmission/physiology , GABAergic Neurons/metabolism , Dendrites/metabolism
8.
Sensors (Basel) ; 22(22)2022 Nov 08.
Article in English | MEDLINE | ID: mdl-36433196

ABSTRACT

Within speech processing, articulatory-to-acoustic mapping (AAM) methods can apply ultrasound tongue imaging (UTI) as an input. (Micro)convex transducers are mostly used, which provide a wedge-shape visual image. However, this process is optimized for the visual inspection of the human eye, and the signal is often post-processed by the equipment. With newer ultrasound equipment, now it is possible to gain access to the raw scanline data (i.e., ultrasound echo return) without any internal post-processing. In this study, we compared the raw scanline representation with the wedge-shaped processed UTI as the input for the residual network applied for AAM, and we also investigated the optimal size of the input image. We found no significant differences between the performance attained using the raw data and the wedge-shaped image extrapolated from it. We found the optimal pixel size to be 64 × 43 in the case of the raw scanline input, and 64 × 64 when transformed to a wedge. Therefore, it is not necessary to use the full original 64 × 842 pixels raw scanline, but a smaller image is enough. This allows for the building of smaller networks, and will be beneficial for the development of session and speaker-independent methods for practical applications. AAM systems have the target application of a "silent speech interface", which could be helpful for the communication of the speaking-impaired, in military applications, or in extremely noisy conditions.


Subject(s)
Acoustics , Tongue , Humans , Tongue/diagnostic imaging , Ultrasonography , Speech , Noise
9.
Cell Rep ; 36(11): 109702, 2021 09 14.
Article in English | MEDLINE | ID: mdl-34525354

ABSTRACT

Modulation of hippocampal dentate gyrus (DG) excitability regulates anxiety. In the DG, glutamatergic mossy cells (MCs) receive the excitatory drive from principal granule cells (GCs) and mediate the feedback excitation and inhibition of GCs. However, the circuit mechanism by which MCs regulate anxiety-related information routing through hippocampal circuits remains unclear. Moreover, the correlation between MC activity and anxiety states is unclear. In this study, we first demonstrate, by means of calcium fiber photometry, that MC activity in the ventral hippocampus (vHPC) of mice increases while they explore anxiogenic environments. Next, juxtacellular recordings reveal that optogenetic activation of MCs preferentially recruits GABAergic neurons, thereby suppressing GCs and ventral CA1 neurons. Finally, chemogenetic excitation of MCs in the vHPC reduces avoidance behaviors in both healthy and anxious mice. These results not only indicate an anxiolytic role of MCs but also suggest that MCs may be a potential therapeutic target for anxiety disorders.


Subject(s)
Behavior, Animal/physiology , Hippocampus/metabolism , Mossy Fibers, Hippocampal/pathology , Animals , CA1 Region, Hippocampal/metabolism , Calcium/metabolism , Chronic Pain/metabolism , Chronic Pain/pathology , Dentate Gyrus/cytology , Disease Models, Animal , Fibromyalgia/metabolism , Fibromyalgia/pathology , GABAergic Neurons/metabolism , Mice , Mice, Inbred C57BL , Mice, Transgenic , Optogenetics/methods , Patch-Clamp Techniques
10.
Elife ; 102021 07 26.
Article in English | MEDLINE | ID: mdl-34308838

ABSTRACT

Summation of ionotropic receptor-mediated responses is critical in neuronal computation by shaping input-output characteristics of neurons. However, arithmetics of summation for metabotropic signals are not known. We characterized the combined ionotropic and metabotropic output of neocortical neurogliaform cells (NGFCs) using electrophysiological and anatomical methods in the rat cerebral cortex. These experiments revealed that GABA receptors are activated outside release sites and confirmed coactivation of putative NGFCs in superficial cortical layers in vivo. Triple recordings from presynaptic NGFCs converging to a postsynaptic neuron revealed sublinear summation of ionotropic GABAA responses and linear summation of metabotropic GABAB responses. Based on a model combining properties of volume transmission and distributions of all NGFC axon terminals, we predict that in 83% of cases one or two NGFCs can provide input to a point in the neuropil. We suggest that interactions of metabotropic GABAergic responses remain linear even if most superficial layer interneurons specialized to recruit GABAB receptors are simultaneously active.


Subject(s)
Interneurons/physiology , Neuroglia/physiology , Neurons/physiology , Synaptic Potentials/physiology , Action Potentials/physiology , Animals , Axons/physiology , Cerebral Cortex/metabolism , Mice , Neural Inhibition , Pyramidal Cells/physiology , Rats , Receptors, GABA-B/metabolism , Somatosensory Cortex/physiology , Synapses/physiology , Synaptic Transmission/physiology
11.
Epilepsia ; 62(7): 1729-1743, 2021 07.
Article in English | MEDLINE | ID: mdl-34018186

ABSTRACT

OBJECTIVE: Hyperpolarization-activated cyclic nucleotide-gated (HCN) channels are known to be involved in the generation of absence seizures (ASs), and there is evidence that cortical and thalamic HCN channel dysfunctions may have a proabsence role. Many HCN channel blockers are available, but their role in ASs has been investigated only by localized brain injection or in in vitro model systems due to their limited brain availability. Here, we investigated the effect on ASs of orally administered ivabradine (an HCN channel blocker approved for the treatment of heart failure in humans) following injection of the P-glycoprotein inhibitor elacridar, which is known to increase penetration into the brain of drug substrates for this efflux transporter. The action of ivabradine was also tested following in vivo microinjection into the cortical initiation network (CIN) of the somatosensory cortex and in the thalamic ventrobasal nucleus (VB) as well as on cortical and thalamocortical neurons in brain slices. METHODS: We used electroencephalographic recordings in freely moving Genetic Absence Epilepsy Rats From Strasbourg (GAERSs) to assess the action of oral administration of ivabradine, with and without elacridar, on ASs. Ivabradine was also microinjected into the CIN and VB of GAERSs in vivo and applied to Wistar CIN and GAERS VB slices while recording patch-clamped cortical Layer 5/6 and thalamocortical neurons, respectively. RESULTS: Oral administration of ivabradine markedly and dose-dependently reduced ASs. Ivabradine injection into CIN abolished ASs and elicited small-amplitude 4-7-Hz waves (without spikes), whereas in the VB it was less potent. Moreover, ivabradine applied to GAERS VB and Wistar CIN slices selectively decreased HCN channel-dependent properties of cortical Layer 5/6 pyramidal and thalamocortical neurons, respectively. SIGNIFICANCE: These results provide the first demonstration of the antiabsence action of a systemically administered HCN channel blocker, indicating the potential of this class of drugs as a novel therapeutic avenue for ASs.


Subject(s)
Anticonvulsants/therapeutic use , Cyclic Nucleotide-Gated Cation Channels/antagonists & inhibitors , Ivabradine/therapeutic use , Seizures/prevention & control , Animals , Anticonvulsants/pharmacology , Cerebral Cortex , Dose-Response Relationship, Drug , Electroencephalography/drug effects , Hyperpolarization-Activated Cyclic Nucleotide-Gated Channels , Ivabradine/pharmacology , Male , Microinjections , Nerve Net , Neurons/drug effects , Pyramidal Cells/drug effects , Rats , Rats, Wistar , Seizures/genetics , Somatosensory Cortex , Ventral Thalamic Nuclei
12.
Nat Commun ; 12(1): 936, 2021 02 10.
Article in English | MEDLINE | ID: mdl-33568670

ABSTRACT

Patch clamp recording of neurons is a labor-intensive and time-consuming procedure. Here, we demonstrate a tool that fully automatically performs electrophysiological recordings in label-free tissue slices. The automation covers the detection of cells in label-free images, calibration of the micropipette movement, approach to the cell with the pipette, formation of the whole-cell configuration, and recording. The cell detection is based on deep learning. The model is trained on a new image database of neurons in unlabeled brain tissue slices. The pipette tip detection and approaching phase use image analysis techniques for precise movements. High-quality measurements are performed on hundreds of human and rodent neurons. We also demonstrate that further molecular and anatomical analysis can be performed on the recorded cells. The software has a diary module that automatically logs patch clamp events. Our tool can multiply the number of daily measurements to help brain research.


Subject(s)
Deep Learning , Neurons/cytology , Adult , Aged , Animals , Automation , Brain/cytology , Electrophysiology , Female , Humans , Image Processing, Computer-Assisted , Male , Middle Aged , Neurons/chemistry , Patch-Clamp Techniques , Rats , Rats, Wistar , Software , Video Recording
13.
HardwareX ; 9: e00192, 2021 Apr.
Article in English | MEDLINE | ID: mdl-35492062

ABSTRACT

Water research is one of many fields where fused filament fabrication 3D printing offers the freedom of customization and the inclusion of commercial components. We present our 330 mL 3D printed laboratory receptacle that has been customized to control pressurized air and liquid in one body. During our tests, water has been stored without loss, and batches were frozen whilst circulating and diffusing air through the liquid. The printing has been optimized with the slicer software and gcode editing, letting the fused filament 3D printer to build a diffuser membrane surrounded by air-tight walls. Detailed construction instructions are given, including piping and control board for operation. According to the functionality of the receptacle and the aeration system, the solutions have been found durable and low-cost. Disadvantages are the time invested in creating customized code, and certain limitations of the membrane itself.

14.
Elife ; 92020 Jan 09.
Article in English | MEDLINE | ID: mdl-31916939

ABSTRACT

Inhibitory autapses are self-innervating synaptic connections in GABAergic interneurons in the brain. Autapses in neocortical layers have not been systematically investigated, and their function in different mammalian species and specific interneuron types is poorly known. We investigated GABAergic parvalbumin-expressing basket cells (pvBCs) in layer 2/3 (L2/3) in human neocortical tissue resected in deep-brain surgery, and in mice as control. Most pvBCs showed robust GABAAR-mediated self-innervation in both species, but autapses were rare in nonfast-spiking GABAergic interneurons. Light- and electron microscopy analyses revealed pvBC axons innervating their own soma and proximal dendrites. GABAergic self-inhibition conductance was similar in human and mouse pvBCs and comparable to that of synapses from pvBCs to other L2/3 neurons. Autaptic conductance prolonged somatic inhibition in pvBCs after a spike and inhibited repetitive firing. Perisomatic autaptic inhibition is common in both human and mouse pvBCs of supragranular neocortex, where they efficiently control discharge of the pvBCs.


Subject(s)
GABA Agents/metabolism , Interneurons/physiology , Neocortex/physiology , Animals , Axons/physiology , Brain/physiology , Carisoprodol , Dendrites/physiology , Electrophysiology , Female , Humans , Male , Mice , Microscopy, Electron , Neocortex/cytology , Parvalbumins , Patch-Clamp Techniques
15.
Science ; 367(6477): 528-537, 2020 01 31.
Article in English | MEDLINE | ID: mdl-31831638

ABSTRACT

Microglia are the main immune cells in the brain and have roles in brain homeostasis and neurological diseases. Mechanisms underlying microglia-neuron communication remain elusive. Here, we identified an interaction site between neuronal cell bodies and microglial processes in mouse and human brain. Somatic microglia-neuron junctions have a specialized nanoarchitecture optimized for purinergic signaling. Activity of neuronal mitochondria was linked with microglial junction formation, which was induced rapidly in response to neuronal activation and blocked by inhibition of P2Y12 receptors. Brain injury-induced changes at somatic junctions triggered P2Y12 receptor-dependent microglial neuroprotection, regulating neuronal calcium load and functional connectivity. Thus, microglial processes at these junctions could potentially monitor and protect neuronal functions.


Subject(s)
Brain Injuries/immunology , Brain/immunology , Intercellular Junctions/immunology , Microglia/immunology , Neurons/immunology , Receptors, Purinergic P2Y12/physiology , Animals , Brain/ultrastructure , Brain Injuries/pathology , Calcium , Cell Communication/immunology , HEK293 Cells , Humans , Mice , Mitochondria/immunology , Shab Potassium Channels/genetics , Shab Potassium Channels/physiology , Signal Transduction
16.
Diabetologia ; 62(4): 717-725, 2019 04.
Article in English | MEDLINE | ID: mdl-30637442

ABSTRACT

AIMS/HYPOTHESIS: Glucagon-like peptide 1 (GLP-1) receptors are expressed by pancreatic beta cells and GLP-1 receptor signalling promotes insulin secretion. GLP-1 receptor agonists have neural effects and are therapeutically promising for mild cognitive impairment and Alzheimer's disease. Our previous results showed that insulin is released by neurogliaform neurons in the cerebral cortex, but the expression of GLP-1 receptors on insulin-producing neocortical neurons has not been tested. In this study, we aimed to determine whether GLP-1 receptors are present in insulin-containing neurons. METHODS: We harvested the cytoplasm of electrophysiologically and anatomically identified neurogliaform interneurons during patch-clamp recordings performed in slices of rat neocortex. Using single-cell digital PCR, we determined copy numbers of Glp1r mRNA and other key genes in neurogliaform cells harvested in conditions corresponding to hypoglycaemia (0.5 mmol/l glucose) and hyperglycaemia (10 mmol/l glucose). In addition, we performed whole-cell patch-clamp recordings on neurogliaform cells to test the effects of GLP-1 receptor agonists for functional validation of single-cell digital PCR results. RESULTS: Single-cell digital PCR revealed GLP-1 receptor expression in neurogliaform cells and showed that copy numbers of mRNA of the Glp1r gene in hyperglycaemia exceeded those in hypoglycaemia by 9.6 times (p < 0.008). Moreover, single-cell digital PCR confirmed co-expression of Glp1r and Ins2 mRNA in neurogliaform cells. Functional expression of GLP-1 receptors was confirmed with whole-cell patch-clamp electrophysiology, showing a reversible effect of GLP-1 on neurogliaform cells. This effect was prevented by pre-treatment with the GLP-1 receptor-specific antagonist exendin-3(9-39) and was absent in hypoglycaemia. In addition, single-cell digital PCR of neurogliaform cells revealed that the expression of transcription factors (Pdx1, Isl1, Mafb) are important in beta cell development. CONCLUSIONS/INTERPRETATION: Our results provide evidence for the functional expression of GLP-1 receptors in neurons known to release insulin in the cerebral cortex. Hyperglycaemia increases the expression of GLP-1 receptors in neurogliaform cells, suggesting that endogenous incretins and therapeutic GLP-1 receptor agonists might have effects on these neurons, similar to those in pancreatic beta cells.


Subject(s)
Cerebral Cortex/metabolism , Glucagon-Like Peptide-1 Receptor/metabolism , Insulin/metabolism , Interneurons/metabolism , Animals , Cytoplasm/metabolism , Glucagon-Like Peptide 1/metabolism , Hyperglycemia/metabolism , Hypoglycemia/metabolism , Male , Neocortex/metabolism , Rats , Rats, Wistar , Signal Transduction
17.
Nat Neurosci ; 21(9): 1185-1195, 2018 09.
Article in English | MEDLINE | ID: mdl-30150662

ABSTRACT

We describe convergent evidence from transcriptomics, morphology, and physiology for a specialized GABAergic neuron subtype in human cortex. Using unbiased single-nucleus RNA sequencing, we identify ten GABAergic interneuron subtypes with combinatorial gene signatures in human cortical layer 1 and characterize a group of human interneurons with anatomical features never described in rodents, having large 'rosehip'-like axonal boutons and compact arborization. These rosehip cells show an immunohistochemical profile (GAD1+CCK+, CNR1-SST-CALB2-PVALB-) matching a single transcriptomically defined cell type whose specific molecular marker signature is not seen in mouse cortex. Rosehip cells in layer 1 make homotypic gap junctions, predominantly target apical dendritic shafts of layer 3 pyramidal neurons, and inhibit backpropagating pyramidal action potentials in microdomains of the dendritic tuft. These cells are therefore positioned for potent local control of distal dendritic computation in cortical pyramidal neurons.


Subject(s)
Cerebral Cortex/metabolism , Cerebral Cortex/ultrastructure , GABAergic Neurons/metabolism , GABAergic Neurons/ultrastructure , Transcriptome , Adult , Aged , Axons/ultrastructure , Dendritic Spines/metabolism , Dendritic Spines/ultrastructure , Gap Junctions/metabolism , Gap Junctions/ultrastructure , Gene Library , Humans , Male , Polymerase Chain Reaction , Presynaptic Terminals/metabolism , Presynaptic Terminals/ultrastructure , Pyramidal Cells/metabolism , Pyramidal Cells/ultrastructure , RNA/analysis , RNA/genetics , Sequence Analysis, RNA
18.
Food Chem ; 256: 129-132, 2018 Aug 01.
Article in English | MEDLINE | ID: mdl-29606428

ABSTRACT

Determination of the oligosaccharide composition in different wort samples is important to monitor their change during the brewing process with different yeast types. In our work, the concentration of fermentable and non-fermentable sugars were monitored by capillary electrophoresis to observe the effect of two different types of yeasts, Saccharomyces pastorianus and Saccharomycodes ludwigii. The former first ferments the monosaccharides, then the higher sugar oligomers, such as maltose and maltotriose, to ethanol, while the latter fully ferments the monosaccharides, but ferments only very low percentages of the oligosaccharides. Therefore, breweries use Saccharomycodes ludwigii to produce beers with low alcohol content. The CE-LIF traces of the wort samples represented unique oligosaccharide signatures.


Subject(s)
Beer/analysis , Electrophoresis, Capillary , Lasers , Oligosaccharides/chemistry , Fermentation , Oligosaccharides/isolation & purification , Saccharomyces/metabolism , Spectrometry, Fluorescence
19.
Nat Commun ; 9(1): 226, 2018 01 15.
Article in English | MEDLINE | ID: mdl-29335532

ABSTRACT

Quantifying heterogeneities within cell populations is important for many fields including cancer research and neurobiology; however, techniques to isolate individual cells are limited. Here, we describe a high-throughput, non-disruptive, and cost-effective isolation method that is capable of capturing individually targeted cells using widely available techniques. Using high-resolution microscopy, laser microcapture microscopy, image analysis, and machine learning, our technology enables scalable molecular genetic analysis of single cells, targetable by morphology or location within the sample.


Subject(s)
Cell Separation/methods , Image Processing, Computer-Assisted/methods , Microscopy, Confocal/methods , Single-Cell Analysis/methods , Animals , Cells, Cultured , Gene Expression Profiling , Humans , Machine Learning , Pyramidal Cells/cytology , Pyramidal Cells/metabolism , Reproducibility of Results
20.
Brain Res Bull ; 137: 277-284, 2018 03.
Article in English | MEDLINE | ID: mdl-29325992

ABSTRACT

Degradation of myelin sheath is thought to be the cause of neurodegenerative diseases, such as multiple sclerosis (MS), but definitive agreement on the mechanism of how myelin is lost is currently lacking. Autoimmune initiation of MS has been recently questioned by proposing that the immune response is a consequence of oligodendrocyte degeneration. To study the process of myelin breakdown, we induced demyelination with cuprizone and applied coherent anti-Stokes Raman scattering (CARS) microscopy, a non-destructive label-free method to image lipid structures in living tissue. We confirmed earlier results showing a brain region dependent myelin destructive effect of cuprizone. In addition, high resolution in situ CARS imaging revealed myelin debris forming lipid droplets alongwith myelinated axon fibers. Quantification of lipid debris with custom-made software for segmentation and three dimensional reconstruction revealed brain region dependent accumulation of lipid drops inversely correlated with the thickness of myelin sheaths. Finally, we confirmed that in situ CARS imaging is applicable to living human brain tissue in brain slices derived from a patient. Thus, CARS microscopy is potent tool for quantitative monitoring of myelin degradation in unprecedented spatiotemporal resolution during oligodendrocyte damage. We think that the accumulation of lipid drops around degrading myelin might be instrumental in triggering subsequent inflammatory processes.


Subject(s)
Brain/pathology , Cuprizone/toxicity , Demyelinating Diseases/pathology , Lipid Metabolism , Myelin Sheath/pathology , Aged , Animals , Axons/drug effects , Axons/metabolism , Axons/pathology , Brain/drug effects , Brain/metabolism , Brain/surgery , Brain Neoplasms/pathology , Brain Neoplasms/surgery , Demyelinating Diseases/metabolism , Female , Humans , Lipid Droplets/drug effects , Lipid Droplets/pathology , Male , Mice, Inbred C57BL , Myelin Sheath/drug effects , Myelin Sheath/metabolism , Tissue Culture Techniques
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