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1.
Int J Mol Sci ; 24(3)2023 Jan 20.
Article in English | MEDLINE | ID: mdl-36768409

ABSTRACT

The continuous improvement of proteomic techniques, most notably mass spectrometry, has generated quantified proteomes of many organisms with unprecedented depth and accuracy. However, there is still a significant discrepancy in the reported numbers of total protein molecules per specific cell type. In this article, we explore the results of proteomic studies of Escherichia coli, Saccharomyces cerevisiae, and HeLa cells in terms of total protein copy numbers per cell. We observe up to a ten-fold difference between reported values. Investigating possible reasons for this discrepancy, we conclude that neither an unmeasured fraction of the proteome nor biases in the quantification of individual proteins can explain the observed discrepancy. We normalize protein copy numbers in each study using a total protein amount per cell as reported in the literature and create integrated proteome maps of the selected model organisms. Our results indicate that cells contain from one to three million protein molecules per µm3 and that protein copy density decreases with increasing organism complexity.


Subject(s)
Escherichia coli , Saccharomyces cerevisiae Proteins , Humans , Escherichia coli/metabolism , Saccharomyces cerevisiae/metabolism , Proteome/metabolism , Proteomics/methods , HeLa Cells , Saccharomyces cerevisiae Proteins/metabolism
2.
J Am Chem Soc ; 144(18): 8129-8137, 2022 05 11.
Article in English | MEDLINE | ID: mdl-35476423

ABSTRACT

Homogeneously catalyzed reactions often make use of additives and promotors that affect reactivity patterns and improve catalytic performance. While the role of reaction promotors is often discussed in view of their chemical reactivity, we demonstrate that they can be involved in catalysis indirectly. In particular, we demonstrate that promotors can adjust the thermodynamics of key transformations in homogeneous hydrogenation catalysis and enable reactions that would be unfavorable otherwise. We identified this phenomenon in a set of well-established and new Mn pincer catalysts that suffer from persistent product inhibition in ester hydrogenation. Although alkoxide base additives do not directly participate in inhibitory transformations, they can affect the equilibrium constants of these processes. Experimentally, we confirm that by varying the base promotor concentration one can control catalyst speciation and inflict substantial changes to the standard free energies of the key steps in the catalytic cycle. Despite the fact that the latter are universally assumed to be constant, we demonstrate that reaction thermodynamics and catalyst state are subject to external control. These results suggest that reaction promotors can be viewed as an integral component of the reaction medium, on its own capable of improving the catalytic performance and reshaping the seemingly rigid thermodynamic landscape of the catalytic transformation.


Subject(s)
Hydrogenation , Catalysis , Thermodynamics
3.
Arch Orthop Trauma Surg ; 141(12): 2277-2286, 2021 Dec.
Article in English | MEDLINE | ID: mdl-34264382

ABSTRACT

BACKGROUND: Cones are known to be good substitutes for metaphyseal and diaphyseal bone loss during revision total knee arthroplasty (RTKA). Often the off-the-shelf cones do not fit to the individual patient's anatomy. New 3D-printing additive technologies allow to develop patient-specific cones. The aim of this prospective study was to describe their outcome. METHODS: From 2017 until 2020, 35 patient-specific titanium cones (15 femoral and 20 tibial) were implanted during 31 RTKAs (45% varus-valgus constrained implants and 55% rotating hinges). Clinical outcome was evaluated using KSS, WOMAC and FJS-12 scoring systems at 12 and 24 months. No patients were lost for follow-up. RESULTS: In all cases, there were no technical difficulties in adapting the cones to both the host bone and the revision implant. By the time of performing data analysis (January 2021), none of the 31 patients needed revision surgery for any reason. At 12 months of follow-up, the mean values of scores for knee function improved significantly from baseline (p < 0.01): KSS-103.00 (min 100-max 111, SD 5.35), WOMAC-16.5 (min 9-max 24, SD 6.45), FJS-12-61.60 (min 52-max 76, SD 9.20). At 24 months, the trend towards improvement of functional results continued but did not reached statistical significance comparing to 12 months: KSS was 105.92 (min 95-max 155, SD 16.18), WOMAC-14.07 (min 0-max 42, SD 12.42), FJS-12-83.78 (min 65-max 97, SD 09.64). Radiographic signs of osteointegration were detected within the first 6 month after surgery in all cases. Loosening of femoral or tibial components as well as peri-prosthetic infection was not observed in any of the patients during the follow-up. CONCLUSION: The original additive technology for designing and producing patient-specific metaphyseal and diaphyseal cones with different porosity zones for extensive femoral and tibial bone defects in RTKA is precise and clinically effective solution, at least in the short term. It could be a valid alternative to "off-the-shelf" cones or sleeves as well as structural allografts and even mega-prosthesis, but a longer follow-up period is required to assess its medium- and long-term reliability.


Subject(s)
Arthroplasty, Replacement, Knee , Knee Prosthesis , Humans , Knee Joint/surgery , Prospective Studies , Prosthesis Design , Reoperation , Reproducibility of Results , Retrospective Studies , Treatment Outcome
4.
J Phys Chem B ; 125(26): 7213-7221, 2021 07 08.
Article in English | MEDLINE | ID: mdl-34170695

ABSTRACT

Ultrafast excited-state dynamics of CuBr3- complex was studied in acetonitrile and dichloromethane solutions using femtosecond transient absorption spectroscopy with 18 fs temporal resolution and quantum-chemical DFT calculations. Upon 640 nm excitation, the CuBr3- complex is promoted to the ligand-to-metal charge transfer (LMCT) state, which then shortly undergoes internal conversion into the vibrationally hot ligand field (LF) excited state with time constants of 30 and 40 fs in acetonitrile and dichloromethane, respectively. The LF state nonradiatively relaxes into the ground state in 2.6 and 7.3 ps in acetonitrile and dichloromethane, respectively. Internal conversion of the LF state is accompanied by vibrational relaxation that occurs on the same time scale. Based on the analysis of coherent oscillations and quantum-chemical calculations, the predominant forms of the CuBr3- complex in acetonitrile and dichloromethane solutions were revealed. In acetonitrile, the CuBr3- complex exists as [CuBr3(CH3CN)2]-, whereas three forms of this complex, [CuBr3CH2Cl2]-, [CuBr3(CH2Cl2)2]-, and [CuBr3(CH2Cl2)3]-, are present in equilibrium in dichloromethane.


Subject(s)
Vibration , Ligands , Spectrum Analysis
5.
J Phys Chem B ; 124(18): 3724-3733, 2020 05 07.
Article in English | MEDLINE | ID: mdl-32283018

ABSTRACT

The ultrafast photochemistry of the [Cr(NCS)6]3- complex upon excitation to the 4T2 ligand-field (LF) state was studied in dimethyl sulfoxide (DMSO) and N,N-dimethylformamide (DMF) in a wide temporal range (100 fs to 9 ms) by a combination of femtosecond and nanosecond transient absorption spectroscopy techniques and supported by quantum-chemical DFT/TD-DFT calculations. The initially excited 4T2 state undergoes intersystem crossing to the vibrationally hot 2E state with time constants of 1.1 ± 0.2 and 1.8 ± 0.1 ps in DMSO and DMF, respectively. Vibrational relaxation occurs in the same time scale and takes 1-5 ps. A major part of the [Cr(NCS)6]3- complex in the 2E state undergoes intersystem crossing to the ground state with time constants of 65 ± 5 and 85 ± 5 ns in DMSO and DMF, respectively. A minor part of electronically excited [Cr(NCS)6]3- undergoes irreversible photochemical decomposition. In DMSO, the photolysis of the [Cr(NCS)6]3- complex results in single or double isothiocyanate ion release followed by the coordination of the solvent molecules with a time constant of 1 ± 0.2 ms.


Subject(s)
Dimethyl Sulfoxide , Dimethylformamide , Electronics , Ligands , Photochemistry
6.
Nat Commun ; 11(1): 605, 2020 01 30.
Article in English | MEDLINE | ID: mdl-32001718

ABSTRACT

Techniques of protein regulation, such as conditional gene expression, RNA interference, knock-in and knock-out, lack sufficient spatiotemporal accuracy, while optogenetic tools suffer from non-physiological response due to overexpression artifacts. Here we present a near-infrared light-activatable optogenetic system, which combines the specificity and orthogonality of intrabodies with the spatiotemporal precision of optogenetics. We engineer optically-controlled intrabodies to regulate genomically expressed protein targets and validate the possibility to further multiplex protein regulation via dual-wavelength optogenetic control. We apply this system to regulate cytoskeletal and enzymatic functions of two non-tagged endogenous proteins, actin and RAS GTPase, involved in complex functional networks sensitive to perturbations. The optogenetically-enhanced intrabodies allow fast and reversible regulation of both proteins, as well as simultaneous monitoring of RAS signaling with visible-light biosensors, enabling all-optical approach. Growing number of intrabodies should make their incorporation into optogenetic tools the versatile technology to regulate endogenous targets.


Subject(s)
Optogenetics , Proteins/metabolism , Actins/metabolism , Cell Movement/radiation effects , Cell Nucleus/metabolism , Cell Nucleus/radiation effects , GTP Phosphohydrolases/metabolism , HeLa Cells , Humans , Light , Protein Engineering
7.
Nat Protoc ; 13(5): 1121-1136, 2018 05.
Article in English | MEDLINE | ID: mdl-29700485

ABSTRACT

Near-infrared (NIR, 740-780 nm) optogenetic systems are well-suited to spectral multiplexing with blue-light-controlled tools. Here, we present two protocols, one for regulation of gene transcription and another for control of protein localization, that use a NIR-responsive bacterial phytochrome BphP1-QPAS1 optogenetic pair. In the first protocol, cells are transfected with the optogenetic constructs for independently controlling gene transcription by NIR (BphP1-QPAS1) and blue (LightOn) light. The NIR and blue-light-controlled gene transcription systems show minimal spectral crosstalk and induce a 35- to 40-fold increase in reporter gene expression. In the second protocol, the BphP1-QPAS1 pair is combined with a light-oxygen-voltage-sensing (LOV) domain-based construct into a single optogenetic tool, termed iRIS. This dual-light-controllable protein localization tool allows tridirectional protein translocation among the cytoplasm, nucleus and plasma membrane. Both procedures can be performed within 3-5 d. Use of NIR light-controlled optogenetic systems should advance basic and biomedical research.


Subject(s)
Gene Expression Regulation/radiation effects , Light , Optogenetics/methods , Protein Transport/radiation effects , Transcription, Genetic/radiation effects , Bacterial Proteins/metabolism , HeLa Cells , Humans
8.
Chembiochem ; 19(12): 1334-1340, 2018 06 18.
Article in English | MEDLINE | ID: mdl-29465801

ABSTRACT

Near-infrared (NIR) light-inducible binding of bacterial phytochrome BphP1 to its engineered partner, QPAS1, is used for optical protein regulation in mammalian cells. However, there are no data on the application of the BphP1-QPAS1 pair in cells derived from various mammalian tissues. Here, we tested the functionality of two BphP1-QPAS1-based optogenetic tools-an NIR- and blue-light-sensing system for control of protein localization (iRIS) and an NIR light-sensing system for transcription activation (TA)-in several cell types, including cortical neurons. We found that the performance of these optogenetic tools often relied on physiological properties of a specific cell type, such as nuclear transport, which could limit the applicability of the blue-light-sensitive component of iRIS. In contrast, the NIR-light-sensing component of iRIS performed well in all tested cell types. The TA system showed the best performance in cervical cancer (HeLa), bone cancer (U-2 OS), and human embryonic kidney (HEK-293) cells. The small size of the QPAS1 component allowed the design of adeno-associated virus (AAV) particles, which were applied to deliver the TA system to neurons.


Subject(s)
Neurons/metabolism , Optogenetics/methods , Proteins/genetics , Transcriptional Activation/radiation effects , Animals , Bacterial Proteins/analysis , Bacterial Proteins/genetics , COS Cells , Cell Line , Cells, Cultured , Chlorocebus aethiops , Gene Expression/radiation effects , HEK293 Cells , HeLa Cells , Humans , Infrared Rays , Light , Luminescent Proteins/analysis , Luminescent Proteins/genetics , Mice , Phytochrome/analysis , Phytochrome/genetics , Protein Engineering/methods , Proteins/analysis , Rats , Red Fluorescent Protein
9.
Sci Rep ; 7(1): 706, 2017 04 06.
Article in English | MEDLINE | ID: mdl-28386094

ABSTRACT

Deep carbon and nitrogen cycles played a critical role in the evolution of the Earth. Here we report on successful studying of speciation in C-O-H-N systems with low nitrogen contents at 6.3 GPa and 1100 to 1400 °C. At fO2 near Fe-FeO (IW) equilibrium, the synthesised fluids contain more than thirty species. Among them, CH4, C2H6, C3H8 and C4H10 are main carbon species. All carbon species, except for C1-C4 alkanes and alcohols, occur in negligible amounts in the fluids generated in systems with low H2O, but С15-С18 alkanes are slightly higher and oxygenated hydrocarbons are more diverse at higher temperatures and H2O concentrations. At a higher oxygen fugacity of +2.5 Δlog fO2 (IW), the fluids almost lack methane and contain about 1 rel.% C2-C4 alkanes, as well as fractions of percent of C15-18 alkanes and notable contents of alcohols and carboxylic acids. Methanimine (CH3N) is inferred to be the main nitrogen species in N-poor reduced fluids. Therefore, the behaviour of CH3N may control the nitrogen cycle in N-poor peridotitic mantle. Oxidation of fluids strongly reduces the concentration of CH4 and bulk carbon. However, higher alkanes, alcohols, and carboxylic acids can resist oxidation and should remain stable in mantle hydrous magmas.

10.
Chem Rev ; 117(9): 6423-6446, 2017 May 10.
Article in English | MEDLINE | ID: mdl-28401765

ABSTRACT

Phytochrome photoreceptors absorb far-red and near-infrared (NIR) light and regulate light responses in plants, fungi, and bacteria. Their multidomain structure and autocatalytic incorporation of linear tetrapyrrole chromophores make phytochromes attractive molecular templates for the development of light-sensing probes. A subclass of bacterial phytochromes (BphPs) utilizes heme-derived biliverdin tetrapyrrole, which is ubiquitous in mammalian tissues, as a chromophore. Because biliverdin possesses the largest electron-conjugated chromophore system among linear tetrapyrroles, BphPs exhibit the most NIR-shifted spectra that reside within the NIR tissue transparency window. Here we analyze phytochrome structure and photochemistry to describe the molecular mechanisms by which they function. We then present strategies to engineer BphP-based NIR fluorescent proteins and review their properties and applications in modern imaging technologies. We next summarize designs of reporters and biosensors and describe their use in the detection of protein-protein interactions, proteolytic activities, and posttranslational modifications. Finally, we provide an overview of optogenetic tools developed from phytochromes and describe their use in light-controlled cell signaling, gene expression, and protein localization. Our review provides guidelines for the selection of NIR probes and tools for noninvasive imaging, sensing, and light-manipulation applications, specifically focusing on probes developed for use in mammalian cells and in vivo.


Subject(s)
Biosensing Techniques/methods , Infrared Rays , Luminescent Proteins/genetics , Optogenetics/methods , Phytochrome/genetics , Protein Engineering/methods , Animals , Humans , Luminescent Proteins/chemistry , Luminescent Proteins/metabolism , Phytochrome/chemistry , Phytochrome/metabolism
11.
Nat Chem Biol ; 13(6): 633-639, 2017 06.
Article in English | MEDLINE | ID: mdl-28346403

ABSTRACT

Multifunctional optogenetic systems are in high demand for use in basic and biomedical research. Near-infrared-light-inducible binding of bacterial phytochrome BphP1 to its natural PpsR2 partner is beneficial for simultaneous use with blue-light-activatable tools. However, applications of the BphP1-PpsR2 pair are limited by the large size, multidomain structure and oligomeric behavior of PpsR2. Here, we engineered a single-domain BphP1 binding partner, Q-PAS1, which is three-fold smaller and lacks oligomerization. We exploited a helix-PAS fold of Q-PAS1 to develop several near-infrared-light-controllable transcription regulation systems, enabling either 40-fold activation or inhibition. The light-induced BphP1-Q-PAS1 interaction allowed modification of the chromatin epigenetic state. Multiplexing the BphP1-Q-PAS1 pair with a blue-light-activatable LOV-domain-based system demonstrated their negligible spectral crosstalk. By integrating the Q-PAS1 and LOV domains in a single optogenetic tool, we achieved tridirectional protein targeting, independently controlled by near-infrared and blue light, thus demonstrating the superiority of Q-PAS1 for spectral multiplexing and engineering of multicomponent systems.


Subject(s)
Bacterial Proteins/metabolism , Gene Expression Regulation , Light , Multienzyme Complexes/chemistry , Optogenetics , Phosphoric Monoester Hydrolases/chemistry , Protein Kinases/chemistry , Bacterial Proteins/chemistry , Bacterial Proteins/genetics , Binding Sites , Biological Assay , Epigenesis, Genetic/genetics , Flow Cytometry , Gene Deletion , HeLa Cells , Humans , Multienzyme Complexes/genetics , Multienzyme Complexes/metabolism , Phosphoric Monoester Hydrolases/genetics , Phosphoric Monoester Hydrolases/metabolism , Phytochrome/metabolism , Protein Engineering , Protein Kinases/genetics , Protein Kinases/metabolism
12.
PLoS One ; 7(9): e43352, 2012.
Article in English | MEDLINE | ID: mdl-23028450

ABSTRACT

A typical property of isolated cultured neuronal networks of dissociated rat cortical cells is synchronized spiking, called bursting, starting about one week after plating, when the dissociated cells have sufficiently sent out their neurites and formed enough synaptic connections. This paper is the third in a series of three on simulation models of cultured networks. Our two previous studies [26], [27] have shown that random recurrent network activity models generate intra- and inter-bursting patterns similar to experimental data. The networks were noise or pacemaker-driven and had Izhikevich-neuronal elements with only short-term plastic (STP) synapses (so, no long-term potentiation, LTP, or depression, LTD, was included). However, elevated pre-phases (burst leaders) and after-phases of burst main shapes, that usually arise during the development of the network, were not yet simulated in sufficient detail. This lack of detail may be due to the fact that the random models completely missed network topology .and a growth model. Therefore, the present paper adds, for the first time, a growth model to the activity model, to give the network a time dependent topology and to explain burst shapes in more detail. Again, without LTP or LTD mechanisms. The integrated growth-activity model yielded realistic bursting patterns. The automatic adjustment of various mutually interdependent network parameters is one of the major advantages of our current approach. Spatio-temporal bursting activity was validated against experiment. Depending on network size, wave reverberation mechanisms were seen along the network boundaries, which may explain the generation of phases of elevated firing before and after the main phase of the burst shape.In summary, the results show that adding topology and growth explain burst shapes in great detail and suggest that young networks still lack/do not need LTP or LTD mechanisms.


Subject(s)
Models, Neurological , Nerve Net , Neural Networks, Computer , Neurons/physiology , Action Potentials , Cells, Cultured , Computer Simulation
13.
Genesis ; 49(7): 546-54, 2011 Jul.
Article in English | MEDLINE | ID: mdl-21538811

ABSTRACT

The zebrafish spinal cord primary motor neurons are commonly used as an experimental model to study the molecular mechanisms that regulate axonal pathfinding and neuromuscular junction formation, and for the modeling of human neurodegenerative disorders. This study characterized a 125-bp mnx1 enhancer to direct gene expression in spinal cord motor neurons. A promoter containing three copies of the 125-bp mnx1 enhancer was generated in a Tol2 vector and used to drive enhanced green fluorescent protein (EGFP) expression either directly or in combination with the Gal4/UAS transcriptional activation system. Both methods induced protein expression for up to 5 days after fertilization, allowing the observation of the dendritic tree and axonal arborization of single motor neurons within a somitic segment in fixed and live animals. The use of the 125-bp mnx1 promoter for transient transgenic expression or for the generation of stable transgenic fish lines will facilitate the study of motor neuron development and neurodegenerative processes.


Subject(s)
DNA-Binding Proteins/genetics , Enhancer Elements, Genetic/genetics , Motor Neurons/metabolism , Staining and Labeling , Transcription Factors/genetics , Zebrafish Proteins/genetics , Zebrafish , Animals , Animals, Genetically Modified , Gene Expression Regulation, Developmental , Molecular Imaging , Neurogenesis/genetics , Zebrafish/embryology , Zebrafish/genetics , Zebrafish/metabolism
14.
Theriogenology ; 75(1): 138-43, 2011 Jan 01.
Article in English | MEDLINE | ID: mdl-20875676

ABSTRACT

Artificial photoperiod treatment is currently the best method to hasten the first ovulation of the breeding season in winter anoestrus mares. However, this is not easy to apply in large herds of mares and, to be effective, has to be planned in the northern hemisphere in December at the latest. Pharmacological treatments have been proposed as alternatives: GnRH agonists, progesterone or its synthetic agonist Altrenogest, and dopamino-antagonists, as pherphenazine, domperidone or sulpiride. Dopamino-antagonists protocols, beginning at a given day of the year, gave controversial results in terms of hastening ovulation. The aim of this study was to evaluate the efficacy of an up-to-21-d long dopamine antagonist (sulpiride) treatment on mares at the beginning of the spring transition for its ability to hasten estrous cyclicity. In Study 1, 49 seasonally-acyclic standardbred mares, maintained in paddocks under natural photoperiod, were treated with 1 mg/kg/d sulpiride at the evidence of the first follicle with of 25 mm in diameter until ovulation for a maximum of 21 d (Group S(1); n = 34) or left untreated (Group C(1); n = 15). Group S(1) and C(1) mares showed a follicle of 35 mm in diameter after 8 and 22 d (median; P < 0.05) and ovulated after 18 and 43 d, respectively (median; P < 0.05). Twenty-two/26 and 6/15 mares of the Group S(1) and C(1) ovulated within 30 d from the beginning of the treatment, respectively (P < 0.05). All the mares of the study cycled until Autumn, unless they became pregnant. In Study 2, pregnancy rates after the first ovulation of the year of 22 acyclic standardbred mares maintained in paddocks under natural photo-period, treated following the same protocol as Study 1 (S(2)), and 47 untreated mares (C(2)) were compared. In Groups S(2) and C(2,) 63.6% and 61.7% of the mares became pregnant after the first cycle (P > 0.05) and 50.0% and 61.1% of the remaining became pregnant in the following cycles (P > 0.05), respectively. Beginning with sulpiride treatment when follicles were 25 mm in diameter resulted in a significant advancement of cyclicity in non-photo-stimulated mares. Pregnancy rates after artificial insemination of treated mares were similar to those of untreated animals.


Subject(s)
Dopamine Antagonists/pharmacology , Horses , Ovulation Induction/veterinary , Ovulation/drug effects , Sulpiride/pharmacology , Animals , Female , Ovarian Follicle/drug effects , Ovulation Induction/methods , Pregnancy , Pregnancy Rate
15.
J Plant Physiol ; 164(12): 1648-55, 2007 Dec.
Article in English | MEDLINE | ID: mdl-17292510

ABSTRACT

Reflectance spectra of leaves of winter wheat, maize, sugar beet and wild vine have been measured. Chlorophyll variations induce changes in the first derivatives of the reflectance spectra. A correlation of various derivative indices such as D(725)/D(702), D(lw)/D(sw), D(lw)/D(702), D(725)/D(sw,)D(715)/D(702), D(m)/D(sw), D(m)/D(702) and D(715)/D(sw) with chlorophyll content was tested, when D is the relative height of the first derivative, the subscript numbers give the wavelength in nm for fixed determination and lw, m and sw are the determination in the long-, medium- and short-wavelength maximum, respectively. The short- and long-wavelength maxima are in the range of 690-730 nm, the medium peak is within the other two, in the range of 710-715 nm. Regression models have been obtained for all types of indices and for all studied plant species. The most promising regression model has been selected. This type of model has been similar for maize, sugar beet and wild vine; therefore, a unified regression model is shown to be applicable for chlorophyll estimation in leaves of these species. The regression model for winter wheat was essentially distinct from both individual and unified models for other studied plants. Reasons for the difference in regression models for various species are discussed.


Subject(s)
Chlorophyll/metabolism , Plant Leaves/metabolism , Plants/metabolism , Models, Biological , Regression Analysis , Spectrum Analysis , Zea mays/metabolism
16.
Eur J Clin Nutr ; 59 Suppl 2: S53-7, 2005 Nov.
Article in English | MEDLINE | ID: mdl-16254583

ABSTRACT

OBJECTIVE: This paper describes baseline data on basal metabolic rate (BMR), thyroid hormone levels and body composition of middle-aged and older people participating in the ZENITH project and the correlation of thyroid hormone levels with zinc status. DESIGN: A multicentre prospective intervention study employing a randomised double blind design. SETTING: Clermont-Ferrand, Theix (France), Coleraine (Northern Ireland), Grenoble (France), Rome (Italy). INTERVENTIONS: BMR has been measured on a subsample of 70 middle-aged volunteers (35 men and 35 women recruited in Clermont-Ferrand, France, aged 55-70 y) and 108 older volunteers (56 men and 52 women recruited in Rome, Italy, aged 70-85 y). Thyroid hormone levels were evaluated in the entire group of ZENITH volunteers (n = 387). BMR was measured by indirect calorimetry. Fat-free mass (FFM) was derived by four skinfold thicknesses using Durnin and Womersley's equations. Concentrations of thyroid hormones (total T3 and T4) were measured using a competitive immunoassay with an enhanced chemiluminescence end point. RESULTS: Italian older volunteers had a significantly lower FFM than middle-aged French volunteers (-7% P < 0.01). A negative correlation between BMR and age (men, r = -0.64; women, r = -0.62; both P < 0.0001) was observed: BMR was significantly (P < 0.000001) lower in Italian elderly volunteers (4.03+/-0.46 kJ/min and 3.29+/-0.42 kJ/min for men and women, respectively) than in middle-aged French volunteers (4.84+/-0.45 kJ/min and 3.87+/-0.38 kJ/min for men and women, respectively), even after adjustment for FFM (-12%). No correlation has been observed between BMR and thyroid hormones both in French and Italian subjects. Total T4 (TT4) concentrations were lowest in middle-aged population (-10%, P < 0.0001). A moderate negative correlation has been found with TT4 and red blood cell zinc (r = -0.12, P < 0.02, slope -0.026). CONCLUSIONS: The results confirm an age-related decline in BMR not entirely explained by body composition or thyroid hormones differences.


Subject(s)
Aging/physiology , Basal Metabolism/physiology , Nutrition Surveys , Thyroid Hormones/blood , Age Factors , Aged , Analysis of Variance , Body Composition/physiology , Calorimetry, Indirect/methods , Double-Blind Method , Europe , Female , Humans , Luminescent Measurements/methods , Male , Middle Aged , Prospective Studies , Sex Factors , Skinfold Thickness , Zinc/blood
17.
J Physiol ; 547(Pt 3): 835-47, 2003 Mar 15.
Article in English | MEDLINE | ID: mdl-12576500

ABSTRACT

One important mechanism cytotoxic T lymphocytes (CTLs) use to kill virus-infected, transplanted or tumour targets is exocytosis of granules that contain cytotoxic agents such as perforin and granzymes. Granule exocytosis-dependent target cell killing is a complex process, involving initial T-cell receptor (TCR)-dependent signalling that includes Ca2+ influx and activation of protein kinase C, shape changes that serve to bind the CTL to the target and, finally, exocytosis of lytic granules at the site of contact with the target cell. Although there is reason to propose that multiple steps in the lytic process could involve the actin cytoskeleton of CTLs, few studies have examined this issue, and those that have do not allow the specific step(s) involved to be determined. We have used the potent membrane-permeant actin cytoskeleton-modifying drugs jasplakinolide and latrunculin A to investigate the actin dependence of defined processes that are expected to be important for granule exocytosis-dependent killing. Our results, obtained using TALL-104 human leukaemic CTLs as a model system, are consistent with the idea that a functional actin cytoskeleton is required for TCR/CD3-dependent signalling, for activation of store-dependent Ca2+ influx and for CTL shape changes. When cells were stimulated with solid-phase anti-CD3 antibodies, treatment with either jasplakinolide or latrunculin A abolished granule exocytosis. However, when cells were stimulated in a manner that bypasses TCR/CD3-dependent signalling, granule exocytosis was not significantly altered, suggesting that the actin cytoskeleton does not function as a barrier to exocytosis.


Subject(s)
Actin Cytoskeleton/immunology , Depsipeptides , Exocytosis/immunology , T-Lymphocytes, Cytotoxic/cytology , T-Lymphocytes, Cytotoxic/immunology , Actin Cytoskeleton/drug effects , Antibodies, Monoclonal/pharmacology , Antineoplastic Agents/pharmacology , Bridged Bicyclo Compounds, Heterocyclic/pharmacology , CD3 Complex/immunology , CD3 Complex/metabolism , Calcium/metabolism , Cell Membrane/metabolism , Cell Movement/drug effects , Cell Movement/immunology , Humans , Leukemia , Lymphoma, B-Cell , Membrane Glycoproteins/metabolism , Peptides, Cyclic/pharmacology , Perforin , Pore Forming Cytotoxic Proteins , Signal Transduction/immunology , Thiazoles/pharmacology , Thiazolidines , Tumor Cells, Cultured
18.
Infection ; 25(1): 35-8, 1997.
Article in English | MEDLINE | ID: mdl-9039536

ABSTRACT

A case-control, prospective, open-label, clinical trial to evaluate efficacy and safety of a combined zidovudine/Thymus Humoral Factor Gamma-2 (THF) therapy in HIV-infected subjects was conducted in 13 patients. Twenty-six patients were included as controls receiving only zidovudine. The two groups of patients were matched according to sex, age, CDC stage of HIV infection, number of CD4+ T cells and type of previous opportunistic infections (if any) and all patients and controls were naive for antiretroviral therapy at the moment they entered the trial. The observation period was protracted up to 47 months (mean 28 +/- 13 months). No significant difference was observed between the two groups as far as surrogate markers of HIV disease progression are concerned. However, patients receiving zidovudine and THF showed a lower number of opportunistic complications. Only one patient in this group progressed to manifest AIDS while 9 of 18 controls presented disease progression. Four patients died in the case group, all of them were CDC stage IV at admission, and 15 of 26 died in the control group (all CDC stage IV at admission, and four patients who presented disease progression during the study period). Survival time was increased in the case group. The exact immunological effect of thymus hormones in HIV infection has still to be elucidated, but a possible therapeutic role of these agents is foreseeable.


Subject(s)
Anti-HIV Agents/therapeutic use , HIV Infections/drug therapy , Oligopeptides/therapeutic use , Reverse Transcriptase Inhibitors/therapeutic use , Zidovudine/therapeutic use , Adult , Case-Control Studies , Double-Blind Method , Drug Therapy, Combination , Female , Follow-Up Studies , Humans , Male , Prospective Studies
19.
Antimicrob Agents Chemother ; 38(6): 1416-8, 1994 Jun.
Article in English | MEDLINE | ID: mdl-8092847

ABSTRACT

The postantibiotic effect (PAE), sub-MIC effect (SME), and postantibiotic sub-MIC effect (PASME) of imipenem on Pseudomonas aeruginosa were investigated with an in vitro dynamic model reproducing in vivo elimination kinetics of the antibiotic. The PASMEs were constantly longer than the corresponding SMEs, but differences between them were not statistically significant. Both PASMEs and SMEs were initially bactericidal and were significantly longer than PAEs. The mean values of both PASMEs and SMEs were over 12 h. SMEs appear to be more relevant for the bacterial growth kinetics than PAEs.


Subject(s)
Imipenem/pharmacology , Pseudomonas aeruginosa/drug effects , Humans , Microbial Sensitivity Tests , Models, Biological
20.
J Antimicrob Chemother ; 32(2): 295-300, 1993 Aug.
Article in English | MEDLINE | ID: mdl-8226431

ABSTRACT

The antimicrobial activity of imipenem was tested in an in-vitro model mimicking human serum pharmacokinetics after either 1000 mg im once daily or 500 mg im twice daily. Six recent clinical isolates of Staphylococcus aureus, Pseudomonas aeruginosa, Escherichia coli, Proteus mirabilis, Klebsiella pneumoniae and Salmonella group B were used as test strains. Our results suggest that a single daily dose of imipenem 1000 mg im exerts an antibacterial action comparable to that obtained with two divided doses of 500 mg.


Subject(s)
Imipenem/administration & dosage , Imipenem/pharmacology , Models, Biological , Dose-Response Relationship, Drug , Drug Administration Schedule , Humans , Imipenem/pharmacokinetics , Injections, Intramuscular , Kinetics , Microbial Sensitivity Tests
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