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J Nat Prod ; 87(6): 1601-1610, 2024 Jun 28.
Article in English | MEDLINE | ID: mdl-38832890

ABSTRACT

Kavaratamide A (1), a new linear lipodepsipeptide possessing an unusual isopropyl-O-methylpyrrolinone moiety, was discovered from the tropical marine filamentous cyanobacterium Moorena bouillonii collected from Kavaratti, India. A comparative chemogeographic analysis of M. bouillonii collected from six different geographical regions led to the prioritized isolation of this metabolite from India as distinctive among our data sets. AI-based structure annotation tools, including SMART 2.1 and DeepSAT, accelerated the structure elucidation by providing useful structural clues, and the full planar structure was elucidated based on comprehensive HRMS, MS/MS fragmentation, and NMR data interpretation. Subsequently, the absolute configuration of 1 was determined using advanced Marfey's analysis, modified Mosher's ester derivatization, and chiral-phase HPLC. The structures of kavaratamides B (2) and C (3) are proposed based on a detailed analysis of their MS/MS fragmentations. The biological activity of kavaratamide A was also investigated and found to show moderate cytotoxicity to the D283-medullablastoma cell line.


Subject(s)
Cyanobacteria , Depsipeptides , Cyanobacteria/chemistry , Depsipeptides/chemistry , Depsipeptides/pharmacology , Depsipeptides/isolation & purification , Molecular Structure , India , Nuclear Magnetic Resonance, Biomolecular , Marine Biology , Humans , Drug Screening Assays, Antitumor , Chromatography, High Pressure Liquid
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