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1.
Protein Eng Des Sel ; 30(6): 449-453, 2017 06 01.
Article in English | MEDLINE | ID: mdl-28482039

ABSTRACT

Laccases and laccase-like multi-copper oxidases (LMCOs) are versatile and robust biocatalysts applied in a variety of oxidative processes, and various studies have attempted to improve their catalytic activity. Here we report the engineering of a bacterial LMCO for enhanced oxidation of the lignin-related compound guaiacol by a combination of structure-guided mutagenesis and DNA shuffling. Mutant L9 showed a 1.39 mM Km for guaiacol and a 2.5-fold increase in turnover rate (kcat/Km = 2.85·104 M-1s-1).


Subject(s)
Bacillus pumilus/enzymology , Bacterial Proteins/metabolism , Guaiacol/metabolism , Laccase/metabolism , Oxidoreductases/metabolism , Recombinant Proteins/metabolism , Bacillus pumilus/genetics , Bacterial Proteins/chemistry , Bacterial Proteins/genetics , Guaiacol/chemistry , Laccase/chemistry , Laccase/genetics , Lignin , Models, Molecular , Oxidation-Reduction , Oxidoreductases/chemistry , Oxidoreductases/genetics , Protein Engineering , Recombinant Proteins/chemistry , Recombinant Proteins/genetics
2.
ACS Appl Mater Interfaces ; 8(31): 20432-9, 2016 Aug 10.
Article in English | MEDLINE | ID: mdl-27429157

ABSTRACT

Functional nanoparticles are valuable materials for energy production, bioelectronics, and diagnostic devices. The combination of biomolecules with nanosized material produces a new hybrid material with properties that can exceed the ones of the single components. Hematite is a widely available material that has found application in various sectors such as in sensing and solar energy production. We report a single-step immobilization process based on affinity and achieved by genetically engineering the protein of interest to carry a hematite-binding peptide. Fabricated hematite nanoparticles were then investigated for the immobilization of the two biomolecules C-phycocyanin (CPC) and laccase from Bacillus pumilus (LACC) under mild conditions. Genetic engineering of biomolecules with a hematite-affinity peptide led to a higher extent of protein immobilization and enhanced the catalytic activity of the enzyme.

3.
Chembiochem ; 16(18): 2576-9, 2015 Dec.
Article in English | MEDLINE | ID: mdl-26437744

ABSTRACT

S-Adenosylmethionine (SAM)-dependent enzymes have great potential for selective alkylation processes. In this study we investigated the regiocomplementary O-methylation of catechols. Enzymatic methylation is often hampered by the need for a stoichiometric supply of SAM and the inhibitory effect of the SAM-derived byproduct on most methyltransferases. To counteract these issues we set up an enzyme cascade. Firstly, SAM was generated from l-methionine and ATP by use of an archaeal methionine adenosyltransferase. Secondly, 4-O-methylation of the substrates dopamine and dihydrocaffeic acid was achieved by use of SafC from the saframycin biosynthesis pathway in 40-70 % yield and high selectivity. The regiocomplementary 3-O-methylation was catalysed by catechol O-methyltransferase from rat. Thirdly, the beneficial influence of a nucleosidase on the overall conversion was demonstrated. The results of this study are important milestones on the pathway to catalytic SAM-dependent alkylation processes.


Subject(s)
Catechol O-Methyltransferase/metabolism , Catechols/metabolism , Methionine Adenosyltransferase/metabolism , N-Glycosyl Hydrolases/metabolism , Animals , Archaea/enzymology , Archaea/metabolism , Archaeal Proteins/metabolism , Catechols/chemistry , Chromatography, High Pressure Liquid , Methionine/metabolism , Methylation , Oxygen/chemistry , Oxygen/metabolism , Rats , S-Adenosylmethionine/metabolism , Spectrophotometry , Stereoisomerism
4.
Biomacromolecules ; 16(11): 3640-50, 2015 Nov 09.
Article in English | MEDLINE | ID: mdl-26413931

ABSTRACT

Controlled and efficient immobilization of specific biomolecules is a key technology to introduce new, favorable functions to materials suitable for biomedical applications. Here, we describe an innovative and efficient, two-step methodology for the stable immobilization of various biomolecules, including small peptides and enzymes onto TEMPO oxidized nanofibrillated cellulose (TO-NFC). The introduction of carboxylate groups to NFC by TEMPO oxidation provided a high surface density of negative charges able to drive the adsorption of biomolecules and take part in covalent cross-linking reactions with 1-ethyl-3-[3-(dimethylamino)propyl]carbodiimide (EDAC) and glutaraldehyde (Ga) chemistry. Up to 0.27 µmol of different biomolecules per mg of TO-NFC could be reversibly immobilized by electrostatic interaction. An additional chemical cross-linking step prevented desorption of more than 80% of these molecules. Using the cysteine-protease papain as model, a highly active papain-TO-NFC conjugate was achieved. Once papain was immobilized, 40% of the initial enzymatic activity was retained, with an increase in kcat from 213 to >700 s(-1) for the covalently immobilized enzymes. The methodology presented in this work expands the range of application for TO-NFC in the biomedical field by enabling well-defined hybrid biomaterials with a high density of functionalization.


Subject(s)
Cellulose, Oxidized/chemistry , Cyclic N-Oxides/chemistry , Drug Carriers/chemistry , Nanofibers/chemistry , Biocompatible Materials/chemistry , Carbodiimides/chemistry , Carboxylic Acids/chemistry , Enzymes, Immobilized/chemistry , Glutaral/chemistry , Hydrogen-Ion Concentration , Papain/chemistry , Surface Properties
5.
Sci Rep ; 5: 10465, 2015 Jun 12.
Article in English | MEDLINE | ID: mdl-26068013

ABSTRACT

Laccases are multi-copper oxidases that oxidize a broad range of substrates at the expense of molecular oxygen, without any need for co-factor regeneration. These enzymes bear high potential for the sustainable synthesis of fine chemicals and the modification of (bio)polymers. Here we describe cloning and expression of five novel bacterial laccase-like multi copper oxidases (LMCOs) of diverse origin which were identified by homology searches in online databases. Activity yields under different expression conditions and temperature stabilities were compared to three previously described enzymes from Bacillus subtilis, Bacillus pumilus and Bacillus clausii. In almost all cases, a switch to oxygen-limited growth conditions after induction increased volumetric activity considerably. For proteins with predicted signal peptides for secretion, recombinant expression with and without signal sequence was investigated. Bacillus CotA-type LMCOs outperformed enzymes from Streptomyces and Gram-negative bacteria with respect to activity yields in Escherichia coli and application relevant biochemical properties. The novel Bacillus coagulans LMCO combined high activity yields in E. coli with unprecedented activity at strong alkaline pH and high storage stability, making it a promising candidate for further development.


Subject(s)
Bacillus/enzymology , Bacterial Proteins/biosynthesis , Bacterial Proteins/chemistry , Escherichia coli/metabolism , Laccase/biosynthesis , Laccase/chemistry , Bacillus/genetics , Bacterial Proteins/genetics , Enzyme Stability , Escherichia coli/genetics , Gene Expression , Hydrogen-Ion Concentration , Laccase/genetics , Recombinant Proteins/biosynthesis , Recombinant Proteins/chemistry , Recombinant Proteins/genetics
6.
Open Biol ; 5(4): 140227, 2015 Apr.
Article in English | MEDLINE | ID: mdl-25833378

ABSTRACT

Conjugate vaccines belong to the most efficient preventive measures against life-threatening bacterial infections. Functional expression of N-oligosaccharyltransferase (N-OST) PglB of Campylobacter jejuni in Escherichia coli enables a simplified production of glycoconjugate vaccines in prokaryotic cells. Polysaccharide antigens of pathogenic bacteria can be covalently coupled to immunogenic acceptor proteins bearing engineered glycosylation sites. Transfer efficiency of PglBCj is low for certain heterologous polysaccharide substrates. In this study, we increased glycosylation rates for Salmonella enterica sv. Typhimurium LT2 O antigen (which lacks N-acetyl sugars) and Staphylococcus aureus CP5 polysaccharides by structure-guided engineering of PglB. A three-dimensional homology model of membrane-associated PglBCj, docked to the natural C. jejuni N-glycan attached to the acceptor peptide, was used to identify potential sugar-interacting residues as targets for mutagenesis. Saturation mutagenesis of an active site residue yielded the enhancing mutation N311V, which facilitated fivefold to 11-fold increased in vivo glycosylation rates as determined by glycoprotein-specific ELISA. Further rounds of in vitro evolution led to a triple mutant S80R-Q287P-N311V enabling a yield improvement of S. enterica LT2 glycoconjugates by a factor of 16. Our results demonstrate that bacterial N-OST can be tailored to specific polysaccharide substrates by structure-guided protein engineering.


Subject(s)
Bacterial Proteins/genetics , Campylobacter jejuni/genetics , Hexosyltransferases/genetics , Membrane Proteins/genetics , Protein Engineering/methods , Amino Acid Sequence , Bacterial Proteins/chemistry , Bacterial Proteins/metabolism , Binding Sites/genetics , Blotting, Western , Campylobacter jejuni/enzymology , Carbohydrate Conformation , Computer Simulation , Enzyme-Linked Immunosorbent Assay , Glycosylation , Hexosyltransferases/chemistry , Hexosyltransferases/metabolism , Membrane Proteins/chemistry , Membrane Proteins/metabolism , Models, Molecular , Molecular Sequence Data , Mutagenesis , Mutation , Oligosaccharides/chemistry , Oligosaccharides/metabolism , Polysaccharides/chemistry , Polysaccharides/metabolism , Protein Binding , Protein Structure, Tertiary , Salmonella enterica/genetics , Salmonella enterica/metabolism , Sequence Homology, Amino Acid , Staphylococcus aureus/genetics , Staphylococcus aureus/metabolism , Substrate Specificity
7.
Microb Cell Fact ; 14: 12, 2015 Jan 23.
Article in English | MEDLINE | ID: mdl-25612741

ABSTRACT

BACKGROUND: Glycoconjugated vaccines composed of polysaccharide antigens covalently linked to immunogenic carrier proteins have proved to belong to the most effective and safest vaccines for combating bacterial pathogens. The functional transfer of the N-glycosylation machinery from Campylobacter jejuni to the standard prokaryotic host Escherichia coli established a novel bioconjugation methodology termed bacterial glycoengineering. RESULTS: In this study, we report on the production of a new recombinant glycoconjugate vaccine against Shigella flexneri 2a representing the major serotype for global outbreaks of shigellosis. We demonstrate that S. flexneri 2a O-polysaccharides can be transferred to a detoxified variant of Pseudomonas aeruginosa carrier protein exotoxin A (EPA) by the C. jejuni oligosaccharyltransferase PglB, resulting in glycosylated EPA-2a. Moreover, we optimized the in vivo production of this novel vaccine by identification and quantitative analysis of critical process parameters for glycoprotein synthesis. It was found that sequential induction of oligosaccharyltransferase PglB and carrier protein EPA increased the specific productivity of EPA-2a by a factor of 1.6. Furthermore, by the addition of 10 g/L of the monosaccharide N-acetylglucosamine during induction, glycoconjugate vaccine yield was boosted up to 3.1-fold. The optimum concentration of Mg2+ ions for N-glycan transfer was determined to be 10 mM. Finally, optimized parameters were transferred to high cell density cultures with a 46-fold increase of overall yield of glycoconjugate compared to the one in initial shake flask production. CONCLUSION: The present study is the first attempt to identify stimulating parameters for improved productivity of S. flexneri 2a bioconjugates. Optimization of glycosylation efficiency will ultimately foster the transfer of lab-scale expression to a cost-effective in vivo production process for a glycoconjugate vaccine against S. flexneri 2a in E. coli. This study is an important step towards this goal and provides a starting point for further optimization studies.


Subject(s)
Glycoconjugates/immunology , Recombinant Proteins/immunology , Shigella Vaccines/immunology , Shigella flexneri/immunology , Acetylglucosamine/pharmacology , Biomass , Bioreactors/microbiology , Blotting, Western , Campylobacter jejuni/genetics , Dysentery, Bacillary/immunology , Dysentery, Bacillary/prevention & control , Escherichia coli/genetics , Fermentation , Gene Expression/drug effects , Gene Expression/immunology , Glycoconjugates/genetics , Glycoconjugates/metabolism , Glycosylation/drug effects , Humans , Kinetics , Protein Engineering/methods , Recombinant Proteins/metabolism , Reproducibility of Results , Shigella Vaccines/genetics , Shigella Vaccines/metabolism , Shigella flexneri/genetics , Time Factors
8.
Microb Cell Fact ; 13: 131, 2014 Aug 31.
Article in English | MEDLINE | ID: mdl-25176327

ABSTRACT

BACKGROUND: The most successful polyhydroxyalkanoate (PHA) in medical applications is poly(4-hydroxybutyrate) (P4HB), which is due to its biodegradability, biocompatibility and mechanical properties. One of the major obstacles for wider applications of P4HB is the cost of production and purification. It is highly desired to obtain P4HB in large scale at a competitive cost. RESULTS: In this work, we studied the possibility to increase P4HB productivity by using high cell density culture. To do so, we investigated for the first time some of the most relevant factors influencing P4HB biosynthesis in recombinant Escherichia coli. We observed that P4HB biosynthesis correlated more with limitations of amino acids and less with nitrogen depletion, contrary to the synthesis of many other types of PHAs. Furthermore, it was found that using glycerol as the primary carbon source, addition of acetic acid at the beginning of a batch culture stimulated P4HB accumulation in E. coli. Fed-batch high cell density cultures were performed to reach high P4HB productivity using glycerol as the sole carbon source for cell growth and 4HB as the precursor for P4HB synthesis. A P4HB yield of 15 g L-1 was obtained using an exponential feeding mode, leading to a productivity of 0.207 g L-1 h-1, which is the highest productivity for P4HB reported so far. CONCLUSIONS: We demonstrated that the NZ-amines (amino acids source) in excess abolished P4HB accumulation, suggesting that limitation in certain amino acid pools promotes P4HB synthesis. Furthermore, the enhanced P4HB yield could be achieved by both the effective growth of E. coli JM109 (pKSSE5.3) on glycerol and the stimulated P4HB synthesis via exogenous addition of acetic acid. We have developed fermentation strategies for P4HB production by using glycerol, leading to a productivity of 0.207 g L-1 h-1 P4HB. This high P4HB productivity will decrease the total production cost, allowing further development of P4HB applications.


Subject(s)
Batch Cell Culture Techniques/methods , Escherichia coli/metabolism , Glycerol/pharmacology , Polyesters/metabolism , Recombination, Genetic , Acetates/pharmacology , Biomass , Escherichia coli/drug effects , Escherichia coli/growth & development , Recombination, Genetic/genetics , Time Factors
9.
Bioconjug Chem ; 25(8): 1492-500, 2014 Aug 20.
Article in English | MEDLINE | ID: mdl-25075751

ABSTRACT

Only a few techniques, such as quartz crystal microbalance and surface plasmon resonance spectroscopy, enable the analysis of dynamic processes on solid supports. Here we have developed a straightforward assay based on flow cytometry to continuously follow enzymatic reactions directly on microparticle surfaces. We applied this real-time flow cytometry (RT-FCM) approach to study the covalent immobilization of green-fluorescent protein (GFPuv) on triglycine-modified polystyrene microbeads by the transpeptidase sortase A (SrtA) from Staphylococcus aureus. Though commonly treated as functionally identical catalysts, the SrtA variants SrtAΔ59 and SrtAΔ25, in which the N-terminal amino acid residues 1-59 and 1-25 of the native enzyme are truncated, were shown to perform very differently with regard to this particular immobilization reaction. While SrtAΔ59 efficiently catalyzed the covalent attachment of GFPuv to the surface (as indicated by a linear increase of microbead fluorescence), SrtAΔ25 was essentially inactive. Besides the length of the N-terminal amino acid extension on the SrtA construct, the position of the hexahistidine tag at either the N- or C-terminus affected the efficiency of enzymatic protein immobilization. Apart from three enzyme variants containing the native core structure of SrtA, we also included three recently evolved mutants of SrtA in this comparative study. With these mutants we observed a rapid initial attachment of the GFPuv target protein to the microbeads. However, with proceeding reaction time, cleavage of the covalently immobilized target protein from the surface prevailed over the coupling reaction, consequently causing a decline of microbead fluorescence. In general, the RT-FCM approach used herein represents a powerful analytical tool for qualitative dynamic studies of many heterogeneous enzymatic reactions or other binding events that influence the fluorescence properties of microparticle surfaces.


Subject(s)
Aminoacyltransferases/metabolism , Bacterial Proteins/metabolism , Cysteine Endopeptidases/metabolism , Flow Cytometry , Immobilized Proteins/chemistry , Immobilized Proteins/metabolism , Aminoacyltransferases/genetics , Bacterial Proteins/genetics , Biocatalysis , Cysteine Endopeptidases/genetics , Green Fluorescent Proteins/chemistry , Green Fluorescent Proteins/metabolism , Models, Molecular , Mutation , Polystyrenes/chemistry , Protein Conformation , Staphylococcus aureus/enzymology , Surface Properties , Time Factors
10.
Sci Rep ; 4: 5370, 2014 Jun 20.
Article in English | MEDLINE | ID: mdl-24947668

ABSTRACT

Enzymatic crosslinking of proteins is often limited by the steric availability of the target residues, as of tyrosyl side chains in the case of tyrosinase. Carrying an N-terminal peptide-tag containing two tyrosine residues, the fluorescent protein C-phycocyanin HisCPC from Synechocystis sp. PCC6803 was crosslinked to fluorescent high-molecular weight forms with tyrosinase. Crosslinking with tyrosinase in the presence of L-tyrosine produced non fluorescent high-molecular weight products. Incubated in the presence of tyrosinase, HisCPC could also be immobilized to amino-modified polystyrene beads thus conferring a blue fluorescence. Crosslinking and immobilization were site-specific as both processes required the presence of the N-terminal peptide in HisCPC.


Subject(s)
Cross-Linking Reagents/chemistry , Formaldehyde/chemistry , Monophenol Monooxygenase/chemistry , Phycocyanin/chemistry , Protein Engineering/methods , Synechocystis/enzymology , Binding Sites , Catalysis , Drug Stability , Enzyme Activation , Enzymes, Immobilized/chemistry , Escherichia coli/enzymology , Escherichia coli/genetics , Protein Binding , Recombinant Proteins/chemistry , Synechocystis/genetics
11.
BMC Biotechnol ; 14: 46, 2014 May 21.
Article in English | MEDLINE | ID: mdl-24885249

ABSTRACT

BACKGROUND: Cholesterol oxidases are important enzymes for applications such as the analysis of cholesterol in clinical samples, the synthesis of steroid derived drugs, and are considered as potential antibacterial drug targets. RESULTS: The gene choA encoding a cholesterol oxidase from Chryseobacterium gleum DSM 16776 was cloned into the pQE-30 expression vector and heterologously expressed in Escherichia coli JM109 co-transformed with pRARE2. The N-terminally His-tagged cholesterol oxidase (CgChoA) was assigned to be a monomer in solution by size exclusion chromatography, showed a temperature optimum of 35°C, and a pH optimum at 6.75 using 0.011 M MOPS buffer under the tested conditions. The purified protein showed a maximum activity of 15.5 U/mg. CgChoA showed a Michaelis-Menten like kinetic behavior only when the substrate was dissolved in water and taurocholate (apparent K(m) = 0.5 mM). In addition, the conversion of cholesterol by CgChoA was studied via biocatalytic batches at analytical scale, and cholest-4-en-3-one was confirmed as product by HPLC-MS. CONCLUSION: CgChoA is a true cholesterol oxidase which activity ranges among the high performing described cholesterol oxidases from other organisms. Thus, the enzyme broadens the available toolbox of cholesterol oxidases for e.g. synthetic and biosensing applications.


Subject(s)
Cholesterol Oxidase/metabolism , Chryseobacterium/enzymology , Gene Expression Regulation, Bacterial , Biocatalysis , Cholesterol/metabolism , Cholesterol Oxidase/genetics , Chryseobacterium/classification , Cloning, Molecular , Escherichia coli/metabolism , Genetic Vectors/metabolism , Hydrogen-Ion Concentration , Phylogeny , Recombinant Proteins/biosynthesis , Recombinant Proteins/chemistry , Recombinant Proteins/isolation & purification , Temperature
12.
Curr Protein Pept Sci ; 15(4): 374-84, 2014.
Article in English | MEDLINE | ID: mdl-24678669

ABSTRACT

The sun is the primary energy source of our planet and potentially can supply all societies with more than just their basic energy needs. Demand of electric energy can be satisfied with photovoltaics, however the global demand for fuels is even higher. The direct way to produce the solar fuel hydrogen is by water splitting in photoelectrochemical (PEC) cells, an artificial mimic of photosynthesis. There is currently strong resurging interest for solar fuels produced by PEC cells, but some fundamental technological problems need to be solved to make PEC water splitting an economic, competitive alternative. One of the problems is to provide a low cost, high performing water oxidizing and oxygen evolving photoanode in an environmentally benign setting. Hematite, α-Fe2O3, satisfies many requirements for a good PEC photoanode, but its efficiency is insufficient in its pristine form. A promising strategy for enhancing photocurrent density takes advantage of photosynthetic proteins. In this paper we give an overview of how electrode surfaces in general and hematite photoanodes in particular can be functionalized with light harvesting proteins. Specifically, we demonstrate how low-cost biomaterials such as cyanobacterial phycocyanin and enzymatically produced melanin increase the overall performance of virtually no-cost metal oxide photoanodes in a PEC system. The implementation of biomaterials changes the overall nature of the photoanode assembly in a way that aggressive alkaline electrolytes such as concentrated KOH are not required anymore. Rather, a more environmentally benign and pH neutral electrolyte can be used.


Subject(s)
Bioengineering , Electrochemical Techniques/methods , Light-Harvesting Protein Complexes/metabolism , Solar Energy , Electrochemical Techniques/instrumentation , Electrodes , Hydrogen/chemistry , Hydrogen/metabolism , Light-Harvesting Protein Complexes/chemistry , Oxygen/chemistry , Oxygen/metabolism , Photosynthesis , Water/chemistry , Water/metabolism
13.
Int J Biol Macromol ; 71: 8-13, 2014 Nov.
Article in English | MEDLINE | ID: mdl-24769215

ABSTRACT

One of the most promising polyhydroxyalkanoates (PHAs) for medical applications is poly(4-hydroxybutyrate) (P4HB) due to its biodegradability, biocompatibility and mechanical properties. Currently, the major hurdle for expanding P4HB applications is the production and recovery cost. In this study, we investigated the stimulating factors for P4HB biosynthesis with the ultimate goal of reducing production cost. We found that addition of propionic acid to the culture medium stimulates the P4HB accumulation in recombinant Escherichia coli JM109 grown on glycerol. This stimulating effect was significantly weakened by addition of exogenous methionine, whereas it was not influenced by addition of cysteine. These results suggest that propionic acid enhances P4HB synthesis by reducing the intracellular methionine pool. Utilizing these findings for P4HB production in batch cultures on glycerol, the volumetric yield of P4HB could be improved 4 fold from 0.9g/L to 3.7g/L by adding 2g/L propionic acid into the medium.


Subject(s)
Escherichia coli/metabolism , Fermentation , Glycerol/metabolism , Polyesters/metabolism , Propionates/metabolism , Bioreactors , Culture Media , Escherichia coli/drug effects , Glucose/metabolism , Methionine/metabolism , Methionine/pharmacology , Propionates/pharmacology
14.
Int J Biol Macromol ; 71: 124-30, 2014 Nov.
Article in English | MEDLINE | ID: mdl-24751504

ABSTRACT

Poly(4-hydroxybutyrate) (P4HB) is a bacterial polyhydroxyalkanoate with interesting biological and physico-chemical properties for the use in biomedical applications. The synthesis of P4HB through a fermentation process often leads to a polymer with a too high molecular weight, making it difficult to process it further by solvent- or melt-processing. In this work P4HB was degraded to obtain polymers with a molecular weight ranging from 1.5×10(3)g/mol to 1.0×10(6)g/mol by using a method established in our laboratory. We studied the effect of the change in molecular weight on thermal and mechanical properties. The decrease of the molecular weight led to an increase in the degree of crystallinity of the polymer. Regarding the tensile mechanical properties, the molecular weight played a more prominent role than the degree of crystallinity in the evolution of the properties for the different polymer fractions. The method presented herein allows the preparation of polymer fractions with easier processability and still adequate thermal and mechanical properties for biomedical applications.


Subject(s)
Polyesters/chemistry , Mechanical Phenomena , Molecular Weight , Polyesters/metabolism , Polymers/chemistry , Solutions , Thermodynamics , Transition Temperature
15.
PLoS One ; 9(3): e89924, 2014.
Article in English | MEDLINE | ID: mdl-24594755

ABSTRACT

Iodine is a well known antimicrobial compound. Laccase, an oxidoreductase which couples the one electron oxidation of diverse phenolic and non-phenolic substrates to the reduction of oxygen to water, is capable of oxidizing unreactive iodide to reactive iodine. We have shown previously that laccase-iodide treatment of spruce wood results in a wash-out resistant antimicrobial surface. In this study, we investigated whether phenolic compounds such as vanillin, which resembles sub-structures of softwood lignin, can be directly iodinated by reacting with laccase and iodide, resulting in compounds with antifungal activity. HPLC-MS analysis showed that vanillin was converted to iodovanillin by laccase catalysis at an excess of potassium iodide. No conversion of vanillin occurred in the absence of enzyme. The addition of redox mediators in catalytic concentrations increased the rate of iodide oxidation ten-fold and the yield of iodovanillin by 50%. Iodinated phenolic products were also detected when o-vanillin, ethyl vanillin, acetovanillone and methyl vanillate were incubated with laccase and iodide. At an increased educt concentration of 0.1 M an almost one to one molar ratio of iodide to vanillin could be used without compromising conversion rate, and the insoluble iodovanillin product could be recovered by simple centrifugation. The novel enzymatic synthesis procedure fulfills key criteria of green chemistry. Biocatalytically produced iodovanillin and iodo-ethyl vanillin had significant growth inhibitory effects on several wood degrading fungal species. For Trametes versicolor, a species causing white rot of wood, almost complete growth inhibition and a partial biocidal effect was observed on agar plates. Enzymatic tests indicated that the iodinated compounds acted as enzyme responsive, antimicrobial materials.


Subject(s)
Antifungal Agents/chemical synthesis , Iodine/chemistry , Laccase/metabolism , Phenols/chemical synthesis , Antifungal Agents/chemistry , Antifungal Agents/pharmacology , Catalysis , Chromatography, High Pressure Liquid , Mass Spectrometry , Oxidation-Reduction , Phenols/chemistry , Phenols/pharmacology
16.
Microb Cell Fact ; 12: 123, 2013 Dec 11.
Article in English | MEDLINE | ID: mdl-24325175

ABSTRACT

BACKGROUND: Poly(4-hydroxybutyrate) (P4HB), belonging to the family of bacterial polyhydroxyalkanoates (PHAs), is a strong, flexible and absorbable material which has a large variety of medical applications like tissue engineering and drug delivery. For efficient production of P4HB recombinant Escherichia coli has been employed. It was previously found that the P4HB synthesis is co-related with the cell growth. In this study, we aimed to investigate the physiology of P4HB synthesis, and to reduce the total production cost by using cheap and widely available xylose as the growth substrate and sodium 4-hydroxybutyrate (Na-4HB) as the precursor for P4HB synthesis. RESULTS: Six different E. coli strains which are able to utilize xylose as carbon source were compared for their ability to accumulate P4HB. E. coli JM109 was found to be the best strain regarding the specific growth rate and the P4HB content. The effect of growth conditions such as temperature and physiological stage of Na-4HB addition on P4HB synthesis was also studied in E. coli JM109 recombinant in batch culture. Under the tested conditions, a cellular P4HB content in the range of 58 to 70% (w w(-1)) and P4HB concentrations in the range of 2.76 to 4.33 g L(-1) were obtained with a conversion yield (Y(P4HB/Na-4HB)) of 92% w w(-1) in single stage batch cultures. Interestingly, three phases were identified during P4HB production: the "growth phase", in which the cells grew exponentially, the "accumulation phase", in which the exponential cell growth stopped while P4HB was accumulated exponentially, and the "stagnation phase", in which the P4HB accumulation stopped and the total biomass remained constant. CONCLUSIONS: P4HB synthesis was found to be separated from the cell growth, i.e. P4HB synthesis mainly took place after the end of the exponential cell growth. High conversion rate and P4HB contents from xylose and precursor were achieved here by simple batch culture, which was only possible previously through fed-batch high cell density cultures with glucose.


Subject(s)
Escherichia coli/growth & development , Polyesters/chemical synthesis , Xylose/metabolism , Polyesters/metabolism , Tissue Engineering , Xylose/genetics
17.
ACS Appl Mater Interfaces ; 5(20): 10090-7, 2013 Oct 23.
Article in English | MEDLINE | ID: mdl-24099219

ABSTRACT

We present here for the first time a simple method for micropatterning nonwoven composite membranes. The approach is based on the simultaneous electrospraying of microparticles and electrospinning of nanofibers from different polymer solution feeds (polyethylene glycol and poly(D,L-lactide)) on a common support. The mechanism of self-organization between fibers and particles into hierarchical honeycomb-like structures, as well as the evolution of the later as a function of the thickness of the composite, is investigated. We demonstrate that aggregates of particles, leading to a nonuniform distribution of the electrostatic field near the collector, are necessary to form the self-organized composite. Furthermore, it is shown that the specific dimensions of the generated patterns can be controlled by tuning the flow rate of electrospraying. The obtained composite mat exhibits a multilevel porous structure, with pore sizes ranging from few up to several hundreds of micrometers. Finally, it is shown that the microparticles can be selectively leached, allowing the production of a monocomponent membrane and retaining the hierarchical organization of the nanofibers suitable for biomedical and filtration applications.

18.
PLoS One ; 8(6): e65633, 2013.
Article in English | MEDLINE | ID: mdl-23755261

ABSTRACT

Laccases (EC 1.10.3.2) are multi-copper oxidases that catalyse the one-electron oxidation of a broad range of compounds including substituted phenols, arylamines and aromatic thiols to the corresponding radicals. Owing to their broad substrate range, copper-containing laccases are versatile biocatalysts, capable of oxidizing numerous natural and non-natural industry-relevant compounds, with water as the sole by-product. In the present study, 10 of the 11 multi-copper oxidases, hitherto considered to be laccases, from fungi, plant and bacterial origin were compared. A substrate screen of 91 natural and non-natural compounds was recorded and revealed a fairly broad but distinctive substrate spectrum amongst the enzymes. Even though the enzymes share conserved active site residues we found that the substrate ranges of the individual enzymes varied considerably. The EC classification is based on the type of chemical reaction performed and the actual name of the enzyme often refers to the physiological substrate. However, for the enzymes studied in this work such classification is not feasible, even more so as their prime substrates or natural functions are mainly unknown. The classification of multi-copper oxidases assigned as laccases remains a challenge. For the sake of simplicity we propose to introduce the term "laccase-like multi-copper oxidase" (LMCO) in addition to the term laccase that we use exclusively for the enzyme originally identified from the sap of the lacquer tree Rhus vernicifera.


Subject(s)
Bacterial Proteins/metabolism , Fungal Proteins/metabolism , Laccase/metabolism , Oxidoreductases/metabolism , Plant Proteins/metabolism , Amino Acid Sequence , Bacterial Proteins/chemistry , Bacterial Proteins/genetics , Biocatalysis , Catalytic Domain , Copper/chemistry , Copper/metabolism , Escherichia coli/genetics , Escherichia coli/metabolism , Fungal Proteins/chemistry , Fungal Proteins/genetics , Laccase/chemistry , Laccase/genetics , Molecular Sequence Data , Oxidation-Reduction , Oxidoreductases/chemistry , Oxidoreductases/genetics , Plant Proteins/chemistry , Plant Proteins/genetics , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/metabolism , Rhus/enzymology , Sequence Alignment , Substrate Specificity , Terminology as Topic
19.
BMC Biotechnol ; 13: 18, 2013 Feb 27.
Article in English | MEDLINE | ID: mdl-23442796

ABSTRACT

BACKGROUND: Tyrosinase is a bifunctional enzyme that catalyzes both the hydroxylation of monophenols to o-diphenols (monophenolase activity) and the subsequent oxidation of the diphenols to o-quinones (diphenolase activity). Due to the potential applications of tyrosinase in biotechnology, in particular in biocatalysis and for biosensors, it is desirable to develop a suitable low-cost process for efficient production of this enzyme. So far, the best production yield reported for tyrosinase was about 1 g L(-1), which was achieved by cultivating the filamentous fungus Trichoderma reesei for 6 days. RESULTS: In this work, tyrosinase from Verrucomicrobium spinosum was expressed in Escherichia coli and its production was studied in both batch and fed-batch cultivations. Effects of various key cultivation parameters on tyrosinase production were first examined in batch cultures to identify optimal conditions. It was found that a culture temperature of 32 °C and induction at the late growth stage were favorable, leading to a highest tyrosinase activity of 0.76 U mL(-1). The fed-batch process was performed by using an exponential feeding strategy to achieve high cell density. With the fed-batch process, a final biomass concentration of 37 g L(-1) (based on optical density) and a tyrosinase activity of 13 U mL(-1) were obtained in 28 hours, leading to a yield of active tyrosinase of about 3 g L(-1). The highest overall volumetric productivity of 103 mg of active tyrosinase per liter and hour (corresponding to 464 mU L(-1) h(-1)) was determined, which is approximately 15 times higher than that obtained in batch cultures. CONCLUSIONS: We have successfully expressed and produced gram quantities per liter of active tyrosinase in recombinant E. coli by optimizing the expression conditions and fed-batch cultivation strategy. Exponential feed of substrate helped to prolong the exponential phase of growth, to reduce the fermentation time and thus the cost. A specific tyrosinase production rate of 103 mg L(-1) h(-1) and a maximum volumetric activity of 464 mU L(-1) h(-1) were achieved in this study. These levels have not been reported previously.


Subject(s)
Escherichia coli/metabolism , Monophenol Monooxygenase/metabolism , Batch Cell Culture Techniques , Biomass , Escherichia coli/growth & development , Monophenol Monooxygenase/genetics , Oxygen/metabolism , Recombinant Proteins/biosynthesis , Recombinant Proteins/genetics , Temperature , Verrucomicrobia/enzymology
20.
J Inorg Biochem ; 121: 37-45, 2013 Apr.
Article in English | MEDLINE | ID: mdl-23333757

ABSTRACT

Proteolytic processing is a key step in the production of polyphenol oxidases such as tyrosinases, converting the inactive proenzyme to an active form. In general, the fungal tyrosinase gene codes for a ~60 kDa protein that is, however, isolated as an active enzyme of ~40 kDa, lacking the C-terminal domain. Using the secreted tyrosinase 2 from Trichoderma reesei as a model protein, we performed a mutagenesis study of the residues in proximity of the experimentally determined cleavage site which are possibly involved in the proteolytic process. However, the mutant forms of tyrosinase 2 were not secreted in a full-length form retaining the C-terminal domain, but they were processed to give a ~45 kDa active form. Aiming at explaining this phenomenon, we analysed in silico the properties of the C-terminal domain of tyrosinase 2, of 23 previously retrieved homologous tyrosinase sequences from fungi (C. Gasparetti, G. Faccio, M. Arvas, J. Buchert, M. Saloheimo, K. Kruus, Appl. Microbiol. Biotechnol. 86 (2010) 213-226) and of nine well-characterised polyphenol oxidases. Based on the results of our study, we exclude the key role of specific amino acids at the cleavage site in the proteolytic process and report an overall higher sensitivity to proteolysis of the linker region and of the whole C-terminal domain of fungal tyrosinases.


Subject(s)
Amino Acids/metabolism , Computational Biology , Fungal Proteins/metabolism , Monophenol Monooxygenase/metabolism , Trichoderma/chemistry , Amino Acid Sequence , Amino Acids/chemistry , Amino Acids/genetics , Catechol Oxidase/chemistry , Catechol Oxidase/genetics , Catechol Oxidase/metabolism , Cloning, Molecular , Escherichia coli/genetics , Fungal Proteins/chemistry , Fungal Proteins/genetics , Molecular Sequence Data , Monophenol Monooxygenase/chemistry , Monophenol Monooxygenase/genetics , Mutagenesis, Site-Directed , Protein Structure, Tertiary , Proteolysis , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/metabolism , Sequence Homology, Amino Acid , Trichoderma/enzymology
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