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1.
bioRxiv ; 2024 Jun 06.
Article in English | MEDLINE | ID: mdl-38895459

ABSTRACT

Biological sex is an important risk factor in cancer, but the underlying cell types and mechanisms remain obscure. Since tumor development is regulated by the immune system, we hypothesize that sex-biased immune interactions underpin sex differences in cancer. The male-biased glioblastoma multiforme (GBM) is an aggressive and treatment-refractory tumor in urgent need of more innovative approaches, such as considering sex differences, to improve outcomes. GBM arises in the specialized brain immune environment dominated by microglia, so we explored sex differences in this immune cell type. We isolated adult human TAM-MGs (tumor-associated macrophages enriched for microglia) and control microglia and found sex-biased inflammatory signatures in GBM and lower-grade tumors associated with pro-tumorigenic activity in males and anti-tumorigenic activity in females. We demonstrated that genes expressed or modulated by the inactive X chromosome facilitate this bias. Together, our results implicate TAM-MGs, specifically their sex chromosomes, as drivers of male bias in GBM.

2.
Biochemistry ; 60(21): 1647-1657, 2021 06 01.
Article in English | MEDLINE | ID: mdl-34009973

ABSTRACT

Tumor susceptibility gene 101 (TSG101) is involved in endosomal maturation and has been implicated in the transcriptional regulation of several steroid hormone receptors, although a detailed characterization of such regulation has yet to be conducted. Here we directly measure binding of TSG101 to one steroid hormone receptor, the glucocorticoid receptor (GR). Using biophysical and cellular assays, we show that the coiled-coil domain of TSG101 (1) binds and folds the disordered N-terminal domain of the GR, (2) upon binding improves the DNA binding of the GR in vitro, and (3) enhances the transcriptional activity of the GR in vivo. Our findings suggest that TSG101 is a bona fide transcriptional co-regulator of the GR and reveal how the underlying thermodynamics affect the function of the GR.


Subject(s)
DNA-Binding Proteins/metabolism , DNA-Binding Proteins/physiology , Endosomal Sorting Complexes Required for Transport/metabolism , Endosomal Sorting Complexes Required for Transport/physiology , Receptors, Glucocorticoid/metabolism , Transcription Factors/metabolism , Transcription Factors/physiology , DNA-Binding Proteins/genetics , Endosomal Sorting Complexes Required for Transport/genetics , Endosomes/metabolism , Gene Expression Regulation/genetics , Gene Expression Regulation/physiology , HeLa Cells , Humans , Protein Binding , Protein Domains/physiology , Regulatory Elements, Transcriptional/physiology , Transcription Factors/genetics , Transcription, Genetic/genetics , Transcriptional Activation/genetics
3.
Nat Commun ; 11(1): 330, 2020 01 16.
Article in English | MEDLINE | ID: mdl-31949138

ABSTRACT

Female reproductive success critically depends on the size and quality of a finite ovarian reserve. Paradoxically, mammals eliminate up to 80% of the initial oocyte pool through the enigmatic process of fetal oocyte attrition (FOA). Here, we interrogate the striking correlation of FOA with retrotransposon LINE-1 (L1) expression in mice to understand how L1 activity influences FOA and its biological relevance. We report that L1 activity triggers FOA through DNA damage-driven apoptosis and the complement system of immunity. We demonstrate this by combined inhibition of L1 reverse transcriptase activity and the Chk2-dependent DNA damage checkpoint to prevent FOA. Remarkably, reverse transcriptase inhibitor AZT-treated Chk2 mutant oocytes that evade FOA initially accumulate, but subsequently resolve, L1-instigated genotoxic threats independent of piRNAs and differentiate, resulting in an increased functional ovarian reserve. We conclude that FOA serves as quality control for oocyte genome integrity, and is not obligatory for oogenesis nor fertility.


Subject(s)
Ovarian Reserve/drug effects , Ovarian Reserve/physiology , RNA-Binding Proteins/metabolism , RNA-Binding Proteins/toxicity , Animals , Apoptosis , Argonaute Proteins/genetics , Checkpoint Kinase 2/genetics , Checkpoint Kinase 2/metabolism , DNA Damage , Female , Fertility , Fetus , Long Interspersed Nucleotide Elements/physiology , Male , Mice , Mice, Inbred C57BL , Mice, Knockout , Mutagenicity Tests , Oocytes/metabolism , Oogenesis , Ovarian Reserve/genetics
4.
Trends Genet ; 35(11): 785-787, 2019 11.
Article in English | MEDLINE | ID: mdl-31597610

ABSTRACT

DNA methylation regulates the organization and function of the genome. Yamanaka et al. now report that de novo methylation of male germ cells of mice involves the transient opening of heterochromatin at megabase-size differentially accessible domains (DADs). This chromatin remodeling likely facilitates de novo methylation of the germ cell genome.


Subject(s)
Chromatin , DNA Methylation , Animals , Genome , Germ Cells , Heterochromatin , Male , Mice
5.
Cold Spring Harb Protoc ; 2018(11)2018 11 01.
Article in English | MEDLINE | ID: mdl-30385676

ABSTRACT

The tardigrade Hypsibius exemplaris was chosen as a model system in part because animals and embryos are optically clear at all stages, facilitating the visualization of events in living material. Here we report new methods for introducing fluorescent dyes into developing H. exemplaris embryos, including methods for fluorescently marking mitochondria, lysosomes, membranes, and nuclei. The development of these techniques suggests approaches for attempting to introduce other molecules into embryos.


Subject(s)
Embryo, Nonmammalian/metabolism , Fluorescent Dyes/metabolism , Staining and Labeling/methods , Tardigrada/embryology , Animals , Cell Membrane/chemistry , Cell Membrane/metabolism , Cell Nucleus/chemistry , Cell Nucleus/metabolism , Embryo, Nonmammalian/chemistry , Embryo, Nonmammalian/embryology , Fluorescent Dyes/chemistry , Lysosomes/chemistry , Lysosomes/metabolism , Microscopy, Confocal , Mitochondria/chemistry , Mitochondria/metabolism , Staining and Labeling/instrumentation
6.
Dev Cell ; 37(3): 204-6, 2016 05 09.
Article in English | MEDLINE | ID: mdl-27165550

ABSTRACT

Stem cell differentiation involves a delicate balance of gene expression and transposon repression. In this issue of Developmental Cell, Shibata et al. (2016) show that a PIWI protein expressed in planarian stem cells is inherited by their differentiating descendants to ensure regenerative capacity of the flatworm via transposon silencing.


Subject(s)
Argonaute Proteins/metabolism , Cell Nucleus/metabolism , Inheritance Patterns/genetics , Planarians/cytology , Stem Cells/metabolism , Animals , Argonaute Proteins/genetics , Cell Differentiation , Gene Silencing , Models, Biological
7.
Biol Reprod ; 93(5): 113, 2015 Nov.
Article in English | MEDLINE | ID: mdl-26423126

ABSTRACT

Depletion of oocytes from the embryonic ovary is a key feature of mammalian oogenesis; however, the rational and molecular bases for this phenomenon remain poorly understood. Presently in the field, the most systematic analysis used to understand the effect of a given molecular pathway on fetal oocyte attrition is to count the number of oocytes in ovaries at different stages of development. This analysis is commonly done using a sampling method based on sectioning of the ovary, a technique that includes many laborious steps culminating in an inaccurate estimate of oocyte number contained within that ovary. This inability to generate data that are directly comparable between labs hinders the field and raises questions about the timing and rate of oocyte depletion. Therefore, we set out to implement a robust method that can be easily used by most research laboratories to study the dynamics of oogenesis during fetal mouse ovary development in both normal and experimental conditions. Here we describe an approach to accurately count the total number of oocytes in embryonic ovaries. This method is based on whole-mount immunofluorescence, tissue clearing with sucrose and ScaleA2 reagent, and automatic detection and counting of germ cells in intact ovaries using confocal microscopy and three-dimensional software analyses. We demonstrate the power of the method by assessing variation of fetal oocyte numbers between left and right ovaries and between litters of mice. Finally, we anticipate that the method could be adopted to the analysis of substages of meiotic prophase I and ovarian somatic cells.


Subject(s)
Cytological Techniques , Oocytes/physiology , Ovary/cytology , Animals , Female , Male , Mice, Inbred ICR , Ovary/embryology , Pregnancy
8.
Dev Biol ; 396(1): 150-7, 2014 Dec 01.
Article in English | MEDLINE | ID: mdl-25278423

ABSTRACT

Germ cells of sexually reproducing organisms receive an array of cues from somatic tissues that instruct developmental processes. Although the nature of these signals differs amongst organisms, the importance of germline-soma interactions is a common theme. Recently, peptide hormones from the nervous system have been shown to regulate germ cell development in the planarian Schmidtea mediterranea; thus, we sought to investigate a second class of hormones with a conserved role in reproduction, the lipophilic hormones. In order to study these signals, we identified a set of putative lipophilic hormone receptors, known as nuclear hormone receptors, and analyzed their functions in reproductive development. We found one gene, nhr-1, belonging to a small class of functionally uncharacterized lophotrochozoan-specific receptors, to be essential for the development of differentiated germ cells. Upon nhr-1 knockdown, germ cells in the testes and ovaries fail to mature, and remain as undifferentiated germline stem cells. Further analysis revealed that nhr-1 mRNA is expressed in the accessory reproductive organs and is required for their development, suggesting that this transcription factor functions cell non-autonomously in regulating germ cell development. Our studies identify a role for nuclear hormone receptors in planarian reproductive maturation and reinforce the significance of germline-soma interactions in sexual reproduction across metazoans.


Subject(s)
Gene Expression Regulation, Developmental , Ovary/embryology , Planarians/embryology , Receptors, Cytoplasmic and Nuclear/genetics , Testis/embryology , Animals , Cell Differentiation , Female , Germ Cells/cytology , Male , Planarians/physiology , RNA Interference , RNA, Messenger/metabolism , Signal Transduction
9.
Nature ; 494(7438): 476-9, 2013 Feb 28.
Article in English | MEDLINE | ID: mdl-23426263

ABSTRACT

Schistosomiasis is among the most prevalent human parasitic diseases, affecting more than 200 million people worldwide. The aetiological agents of this disease are trematode flatworms (Schistosoma) that live and lay eggs within the vasculature of the host. These eggs lodge in host tissues, causing inflammatory responses that are the primary cause of morbidity. Because these parasites can live and reproduce within human hosts for decades, elucidating the mechanisms that promote their longevity is of fundamental importance. Although adult pluripotent stem cells, called neoblasts, drive long-term homeostatic tissue maintenance in long-lived free-living flatworms (for example, planarians), and neoblast-like cells have been described in some parasitic tapeworms, little is known about whether similar cell types exist in any trematode species. Here we describe a population of neoblast-like cells in the trematode Schistosoma mansoni. These cells resemble planarian neoblasts morphologically and share their ability to proliferate and differentiate into derivatives of multiple germ layers. Capitalizing on available genomic resources and RNA-seq-based gene expression profiling, we find that these schistosome neoblast-like cells express a fibroblast growth factor receptor orthologue. Using RNA interference we demonstrate that this gene is required for the maintenance of these neoblast-like cells. Our observations indicate that adaptation of developmental strategies shared by free-living ancestors to modern-day schistosomes probably contributed to the success of these animals as long-lived obligate parasites. We expect that future studies deciphering the function of these neoblast-like cells will have important implications for understanding the biology of these devastating parasites.


Subject(s)
Adult Stem Cells/cytology , Parasites/cytology , Pluripotent Stem Cells/cytology , Schistosoma mansoni/cytology , Adult Stem Cells/metabolism , Animals , Cell Differentiation , Cell Proliferation , Female , Gene Expression Profiling , Genes, Helminth/genetics , Helminth Proteins/genetics , Helminth Proteins/metabolism , Humans , Male , Mice , Pluripotent Stem Cells/metabolism , RNA Interference , Receptors, Fibroblast Growth Factor/deficiency , Receptors, Fibroblast Growth Factor/genetics , Receptors, Fibroblast Growth Factor/metabolism , Schistosomiasis mansoni/parasitology
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