Antioxidant activity of erlotinib and gefitinib: theoretical and experimental insights.

Erlotinib and gefitinib are quinazoline derivatives with antineoplastic properties. Usually, intake of antineoplastic agents results in much a greater degree of oxidative stress, i.e. the production of free radicals, than induced by cancer itself. Hence, anticancerous drugs must also exhibit antioxidant activity but this has not been studied thus far. In this study, the antioxidant activity of erlotinib and gefitinib was examined by experimental and computational studies. It was found that erlotinib and gefitinib exhibit good 2,2-dipheny l-1-picrylhydrazyl (DPPH) radical and hydroxyl radical scavenging (HRS) activities. In DPPH assay, the IC50 for erlotinib and gefitinib were 0.584 and 0.696 mM, respectively, while IC50 for HRS assay were 0.843 and 1.03 mM for erlotinib and gefitinib, respectively. Structural characteristics such as frontier molecular orbitals (FMOs), molecular electrostatic potential maps (MESPs), and global descriptive parameters were calculated at DFT/B3LYP/6-311++G (d,p) on the optimized geometries of erlotinib and gefitinib. UV-visible spectroscopy revealed the possible electronic transitions between the FMOs and their associated excitation energies of both drugs and found that erlotinib has π to π* transitions while gefitinib has π to π* and σ to π* transitions. To elucidate the antioxidant activity of erlotinib and gefitinib, three mechanisms namely hydrogen atom transfer (HAT), single electron transfer proton transfer (SETPT), and sequential proton-loss electron-transfer (SPLET) were employed and articulated the results in arithmetic parameters like bond dissociation energy (BDE), proton affinity (PA), ionization potential (IP), electron transfer enthalpy (ETE), and proton dissociation enthalpy (PDE). Further, molecular docking studies have been carried out to have a better understanding of binding sites and modes of interaction with a well-known antioxidant target protein monoamine oxidase-B (MAO-B) employing docking scores and types of interactions. All the calculated parameters point out that though gefitinib and erlotinib were interchangeable, erlotinib requires a lesser amount of energy for proton transfer and electron transfer, moreover it scavenges radicals easily.

Theoretical insights into the radical scavenging activity of glipizide: DFT and molecular docking studies.

Glipizide is an N-sulfonylurea compound used in the treatment of hyperglycemia in patients with type 2 diabetes mellitus. In the present study, DFT-based computational methods and molecular docking studies have been performed to systematically evaluate the radical scavenger behavior of the title molecule. Structural characteristics such as molecular descriptors, frontier molecular orbitals, molecular potential mapping, and Mulliken charge population have been investigated. Thermodynamic parameters like proton affinity (PA), ionization potential (IP), bond dissociation energy (BDE), electron transfer enthalpy (ETE), and proton dissociation enthalpy (PDE) related to three antiradical mechanisms namely hydrogen atom transfer (HAT), sequential electron transfer proton transfer (SETPT) and sequential proton loss electron transfer (SPLET) have been studied. Also, molecular docking studies have been carried out to have a theoretical understanding of the molecular mechanism and for the elucidation of binding mode/modes of a compound targeted through non-covalent interactions. The obtained results are of great significance in better understanding the reaction mechanism of the title molecule and opens a new perspective for the design of potent antioxidant agents.

The JG ß-relaxation in water and impact on the dynamics of aqueous mixtures and hydrated biomolecules.

Although by now the glass transition temperature of uncrystallized bulk water is generally accepted to manifest at temperature Tg near 136 K, not much known are the spectral dispersion of the structural α-relaxation and the temperature dependence of its relaxation time τα,bulk(T). Whether bulk water has the supposedly ubiquitous Johari-Goldstein (JG) ß-relaxation is a question that has not been answered. By studying the structural α-relaxation over a wide range of temperatures in several aqueous mixtures without crystallization and with glass transition temperatures Tg close to 136 K, we deduce the properties of the α-relaxation and the temperature dependence of τα,bulk(T) of bulk water. The frequency dispersion of the α-relaxation is narrow, indicating that it is weakly cooperative. A single Vogel-Fulcher-Tammann (VFT) temperature dependence can describe the data of τα,bulk(T) at low temperatures as well as at high temperatures from neutron scattering and GHz-THz dielectric relaxation, and hence, there is no fragile to strong transition. The Tg-scaled VFT temperature dependence of τα,bulk(T) has a small fragility index m less than 44, indicating that water is a "strong" glass-former. The existence of the JG ß-relaxation in bulk water is supported by its equivalent relaxation observed in water confined in spaces with lengths of nanometer scale and having Arrhenius T-dependence of its relaxation times τconf(T). The equivalence is justified by the drastic reduction of cooperativity of the α-relaxation in nanoconfinement and rendering it to become the JG ß-relaxation. Thus, the τconf(T) from experiments can be taken as τß,bulk(T), the JG ß-relaxation time of bulk water. The ratio τα,bulk(Tg)/τß,bulk(Tg) is smaller than most glass-formers, and it corresponds to the Kohlrausch α-correlation function, exp[-(t/τα,bulk)1-n], having (1-n) = 0.90. The dielectric data of many aqueous mixtures and hydrated biomolecules with Tg higher than that of water show the presence of a secondary ν-relaxation from the water component. The ν-relaxation is strongly connected to the α-relaxation in properties, and hence, it belongs to the special class of secondary relaxations in glass-forming systems. Typically, its relaxation time τν(T) is longer than τß,bulk(T), but τν(T) becomes about the same as τß,bulk(T) at sufficiently high water content. However, τν(T) does not become shorter than τß,bulk(T). Thus, τß,bulk(T) is the lower bound of τν(T) for all aqueous mixtures and hydrated biomolecules. Moreover, it is τß,bulk(T) but not τα(T) that is responsible for the dynamic transition of hydrated globular proteins.

Experimental and density functional theory studies on benzalkonium ibuprofenate, a double active pharmaceutical ingredient.

Molecular aspects of a double active pharmaceutical ingredient in ionic liquid form, benzalkonium ibuprofenate (BaIb), were studied using density functional theory (DFT/B3LYP/6-31+G (d, p)). A detailed discussion on optimized geometry, energy, heat and the enthalpy of BaIb was carried out. The computed vibrational results agree well with the experimental results. The stability and biological activity were compared to the parent drugs on the basis of global descriptive parameters. The electrophilic and nucleophilic sites were pointed out in the MESP structures well evidently. NBO analysis was also done to predict the relative aromaticity, delocalization effects and the contribution towards stabilization energy of the title compound. The information about non-covalent, non-ionic weak interaction between the cation and anion was obtained from the list of Mulliken charges and NBO analysis.

Molecular dynamics of amorphous pharmaceutical fenofibrate studied by broadband dielectric spectroscopy.

Fenofibrate is mainly used to reduce cholesterol level in patients at risk of cardiovascular disease. Thermal transition study with the help of differential scanning calorimetry (DSC) shows that the aforesaid active pharmaceutical ingredient (API) is a good glass former. Based on our DSC study, the molecular dynamics of this API has been carried out by broadband dielectric spectroscopy (BDS) covering wide temperature and frequency ranges. Dielectric measurements of amorphous fenofibrate were performed after its vitrification by fast cooling from a few degrees above the melting point (Tm=354.11 K) to deep glassy state. The sample does not show any crystallization tendency during cooling and reaches the glassy state. The temperature dependence of the structural relaxation has been fitted by single Vogel-Fulcher-Tamman (VFT) equation. From VFT fit, glass transition temperature (Tg) was estimated as 250.56 K and fragility (m) was determined as 94.02. This drug is classified as a fragile glass former. Deviations of experimental data from Kohlrausch-Williams-Watts (KWW) fits on high-frequency flank of α-peak indicate the presence of an excess wing in fenofibrate. Based on Ngai׳s coupling model, we identified the excess wing as true Johari-Goldstein (JG) process. Below the glass transition temperature one can clearly see a secondary relaxation (γ) with an activation energy of 32.67 kJ/mol.

Coupling of Caged Molecule Dynamics to JG ß-Relaxation: I.

The paper (Sibik, J.; Elliott, S. R.; Zeitler, J. A. J. Phys. Chem. Lett. 2014, 5, 1968-1972) used terahertz time-domain spectroscopy (THz-TDS) to study the dynamics of the polyalcohols, glycerol, threitol, xylitol, and sorbitol, at temperatures from below to above the glass transition temperature Tg. On heating the glasses, they observed the dielectric losses, ε″(ν) at ν = 1 THz, increase monotonically with temperature and change dependence at two temperatures, first deep in the glassy state at TTHz = 0.65Tg and second at Tg. The effects at both temperatures are most prominent in sorbitol but become progressively weaker in the order of xylitol and threitol, and the sub-Tg change was not observed in glycerol. They suggested this feature originates from the high-frequency tail of the Johari-Goldstein (JG) ß-relaxation, and the temperature region near 0.65Tg is the universal region for the secondary glass transition due to the JG ß-relaxation. In this paper, we first use isothermal dielectric relaxation data at frequencies below 10(6) Hz to locate the "second glass transition" temperature Tß at which the JG ß-relaxation time τJG reaches 100 s. The value of Tß is close to TTHz = 0.65Tg for sorbitol (0.63Tg) and xylitol (0.65Tg), but Tß is 0.74Tg for threitol and 0.83Tg for glycerol. Notwithstanding, the larger values of Tß of glycerol are consistent with the THz-TDS data. Next, we identify the dynamic process probed by THz-TDS as the caged molecule dynamics, showing up in susceptibility spectra as nearly constant loss (NCL). The caged molecule dynamics regime is terminated by the onset of the primitive relaxation of the coupling model, which is the precursor of the JG ß-relaxation. From this relation, established is the connection of the magnitude and temperature dependence of the NCL and those of τJG. This connection explains the monotonic increase of NCL with temperature and change to a stronger dependence after crossing Tß giving rise to the sub-Tg behavior of ε″(ν) observed in experiment. Beyond the polyalcohols, we present new dielectric relaxation measurements of flufenamic acid and recall dielectric, NMR, and calorimetric data of indomethacin. The data of these two pharmaceuticals enables us to determine the value of Tß = 0.67Tg for flufenamic acid and Tß = 0.58Tg or Tß = 0.62Tg for indomethacin, which can be compared with experimental values of TTHz from THz-TDS measurements when they become available. We point out that the sub-Tg change of NCL at Tß found by THz-TDS can be observed by other high frequency spectroscopy including neutron scattering, light scattering, Brillouin scattering, and inelastic X-ray scattering. An example from neutron scattering is cited. All the findings demonstrate the connection of all processes in the evolution of dynamics ending at the structural α-relaxation.

Critical issues of current research on the dynamics leading to glass transition.

Glass transition is still an unsolved problem in condensed matter physics and chemistry. In this paper, we critically reexamine experimental data and theoretical interpretations of dynamic properties of various processes seen over a wide time range from picoseconds to laboratory time scales. In order of increasing time, the ubiquitous processes considered include (i) the dynamics of caged molecular units with motion confined within the anharmonic intermolecular potential and where no genuine relaxation has yet taken place; (ii) the onset of the Johari-Goldstein secondary relaxation involving rotation or translation of the entire molecular unit and causing the decay of the cages, to be followed by the cooperative and dynamically heterogeneous motions participated by increasing number of molecules or length scale; and (iii) the terminal primary alpha-relaxation with the maximum cooperative length-scale allowed by the intermolecular interaction and constraints of the glass former. Some general and important properties found in each of these processes are shown to be interrelated, indicating that the processes are connected, with one being the precursor of the other following it. Thus, a theory of glass transition is neither complete nor fundamental unless all of these processes and their inter-relations have been accounted. In addition to published data, new experimental data are reported here to provide a limited collection of critical experimental facts having an impact on current issues of glass transition research and servingas a guide for the construction of a complete and successful theory in the future.