Bracon brevicornis Genome Showcases the Potential of Linked-Read Sequencing in Identifying a Putative Complementary Sex Determiner Gene.

Bracon brevicornis is an ectoparasitoid of a wide range of larval-stage Lepidopterans, including several pests of important crops, such as the corn borer, Ostrinia nubilalis. It is also one of the earliest documented cases of complementary sex determination in Hymenoptera. Here, we present the linked-read-based genome of B. brevicornis, complete with an ab initio-derived annotation and protein comparisons with fellow braconids, Fopius arisanus and Diachasma alloeum. We demonstrate the potential of linked-read assemblies in exploring regions of heterozygosity and search for structural and homology-derived evidence of the complementary sex determiner gene (csd).

Next-generation biological control: the need for integrating genetics and genomics.

Biological control is widely successful at controlling pests, but effective biocontrol agents are now more difficult to import from countries of origin due to more restrictive international trade laws (the Nagoya Protocol). Coupled with increasing demand, the efficacy of existing and new biocontrol agents needs to be improved with genetic and genomic approaches. Although they have been underutilised in the past, application of genetic and genomic techniques is becoming more feasible from both technological and economic perspectives. We review current methods and provide a framework for using them. First, it is necessary to identify which biocontrol trait to select and in what direction. Next, the genes or markers linked to these traits need be determined, including how to implement this information into a selective breeding program. Choosing a trait can be assisted by modelling to account for the proper agro-ecological context, and by knowing which traits have sufficiently high heritability values. We provide guidelines for designing genomic strategies in biocontrol programs, which depend on the organism, budget, and desired objective. Genomic approaches start with genome sequencing and assembly. We provide a guide for deciding the most successful sequencing strategy for biocontrol agents. Gene discovery involves quantitative trait loci analyses, transcriptomic and proteomic studies, and gene editing. Improving biocontrol practices includes marker-assisted selection, genomic selection and microbiome manipulation of biocontrol agents, and monitoring for genetic variation during rearing and post-release. We conclude by identifying the most promising applications of genetic and genomic methods to improve biological control efficacy.

A meta-analysis to assess long-term spatiotemporal changes of benthic coral and macroalgae cover in the Mexican Caribbean.

Coral reefs in the wider Caribbean declined in hard coral cover by ~80% since the 1970s, but spatiotemporal analyses for sub-regions are lacking. Here, we explored benthic change patterns in the Mexican Caribbean reefs through meta-analysis between 1978 and 2016 including 125 coral reef sites. Findings revealed that hard coral cover decreased from ~26% in the 1970s to 16% in 2016, whereas macroalgae cover increased to ~30% in 2016. Both groups showed high spatiotemporal variability. Hard coral cover declined in total by 12% from 1978 to 2004 but increased again by 5% between 2005 and 2016 indicating some coral recovery after the 2005 mass bleaching event and hurricane impacts. In 2016, more than 80% of studied reefs were dominated by macroalgae, while only 15% were dominated by hard corals. This stands in contrast to 1978 when all reef sites surveyed were dominated by hard corals. This study is among the first within the Caribbean region that reports local recovery in coral cover in the Caribbean, while other Caribbean reefs have failed to recover. Most Mexican Caribbean coral reefs are now no longer dominated by hard corals. In order to prevent further reef degradation, viable and reliable conservation alternatives are required.

Egg laying rather than host quality or host feeding experience drives habitat estimation in the parasitic wasp Nasonia vitripennis.

In variable environments, sampling information on habitat quality is essential for making adaptive foraging decisions. In insect parasitoids, females foraging for hosts have repeatedly been shown to employ behavioral strategies that are in line with predictions from optimal foraging models. Yet, which cues exactly are employed to sample information on habitat quality has rarely been investigated. Using the gregarious parasitoid Nasonia vitripennis (Walker; Hymenoptera: Pteromalidae), we provided females with different cues about hosts to elucidate, which of them would change a wasp's posterior behavior suggesting a change in information status. We employed posterior clutch size decisions on a host as proxy for a female's estimation of habitat quality. Taking into account changes in physiological state of the foraging parasitoid, we tested whether different host qualities encountered previously change the subsequent clutch size decision in females. Additionally, we investigated whether other kinds of positive experiences-such as ample time to investigate hosts, host feeding, or egg laying-would increase a wasp's estimated value of habitat quality. Contrary to our expectations, quality differences in previously encountered hosts did not affect clutch size decisions. However, we found that prior egg laying experience changes posterior egg allocation to a host, indicating a change in female information status. Host feeding and the time available for host inspection, though correlated with egg laying experience, did not seem to contribute to this change in information status.

Intraspecific variability in associative learning in the parasitic wasp Nasonia vitripennis.

The ability to learn is key to behavioral adaptation to changing environments. Yet, learning rate and memory retention can vary greatly across or even within species. While interspecific differences have been attributed to ecological context or life history constraints, intraspecific variability in learning behavior is rarely studied and more often, ignored: inferences of the cognitive abilities of a species are most of the time made from experiments using individuals of a single population. Here, we show that learning of host-associated cues in the parasitic wasp Nasonia vitripennis (Walker) (Hymenoptera: Pteromalidae) shows considerable interpopulation variability, which is at least partly, genetically determined. The strengths of the learning response differed predictably between populations and also varied with the rewarding stimulus. We tested memory retention in a genetically diverse strain and in an iso-female line, bearing a low genetic variability. In addition, we compared our findings with published studies on a third strain using a meta-analytical approach. Our findings suggest that all three strains differ in memory formation from each other. We conclude that, even though the associative learning of host cues is most likely under strong natural selection in parasitoid wasps, considerable genetic variability is maintained at the population as well as at the species level in N. vitripennis.

Haploid, diploid, and triploid--discrimination ability against polyploid mating partner in the parasitic wasp, Bracon brevicornis (Hymenoptera: Braconidae).

Because the quality of mating partners varies, females of several taxa have evolved the ability to discriminate against low-quality mates. Although males in the Hymenoptera are usually haploid, diploid males may occur in species with complementary sex determination. Diploid males are almost always sterile in most of the species studied so far. They are thus of very low quality as mating partners, especially when females mate only once in life. We hypothesize that hymenopteran females might have evolved the ability to discriminate against infertile diploid males and avoid mating with them. To test this hypothesis, we studied diploid male fitness in the parasitoid wasp Bracon brevicornis Wesmael (Hymenoptera: Braconidae) by measuring survival rate and fertility and then estimated their chances of actually mating with a female. Flow cytometry was used to determine the ploidy level of wasps. The fitness costs of mating a diploid male are indeed high in this species: only 15% were able to sire daughters, of which 97% were triploid and hardly able to produce viable offspring. In contrast to the hypothesis of unsuitable mate discrimination though, no evidence was found for increased rejection of diploid males by females. Male discrimination against an unsuitable partner did also not occur: triploid females elicited the same intensity of courtship behavior in males than did diploid ones.

Genetic incompatibility drives mate choice in a parasitic wasp.

INTRODUCTION: Allelic incompatibility between individuals of the same species should select for mate choice based on the genetic make-up of both partners at loci that influence offspring fitness. As a consequence, mate choice may be an important driver of allelic diversity. A complementary sex determination (CSD) system is responsible for intraspecific allelic incompatibility in many species of ants, bees, and wasps. CSD may thus favour disassortative mating and in this, resembles the MHC of the vertebrate immune system, or the self-incompatibility (SI) system of higher plants. RESULTS: Here we show that in the monogamous parasitic wasp Bracon brevicornis (Wesmael), females are able to reject partners with incompatible alleles. Forcing females to accept initially rejected partners resulted in sex ratio distortion and partial infertility of offspring. CONCLUSIONS: CSD-disassortative mating occurred independent of kin recognition and inbreeding avoidance in our experiment. The fitness consequences of mate choice are directly observable, not influenced by environmental effects, and more severe than in comparable systems (SI or MHC), on individuals as well as at the population level. Our results thus demonstrate the strong potential of female mate choice for maintaining high offspring fitness in this species.

Omnia tempus habent: habitat-specific differences in olfactory learning and decision making in parasitic wasps.

Olfactory learning is generally involved in the host-finding process in parasitic wasps. But the reliability of odour cues for predicting future host-finding success depends on the rate at which host-substrate associations are subject to variation within and between parasitoid generations. Since learning comes at physiological costs, we can expect animals to learn in a way that optimizes costs and benefits. The parasitic wasp Venturia canescens occurs in two reproductive modes that forage in different environments. We tested populations from both habitat types for learning rate, memory duration and speed of decision making and found considerable differences. Thelytokous wasps live in habitats with relatively stable host-substrate associations and might encounter hosts at a high rate. They showed a preference for a new odour after only a single experience. However, the response faded within 24 h, even with spaced learning experiences. Arrhenotokous wasps live in habitats where hosts are scarce and are likely to be found on a variety of substrates. Like the thelytokous ones, arrhenotokous wasps learned a new odour after a single experience, but seemingly took long for information processing: one and four hours after an experience, a speed-accuracy trade-off became visible, while 24 h after the experience, wasps decided quickly and in accordance with what they had learned. In addition, these wasps are likely to have developed an aversion response towards Geraniol in the CleanAir experiment. We conclude that the respective cognitive pattern can be attributed to the ecological circumstances of the wasp's natural habitat.

How to measure patch encounter rate: decision-making mechanisms in the parasitic wasp Asobara tabida.

Parasitic wasps are faced with the decision of where and for how long to search for hosts. Their leaving decisions depend on the rate at which new host-containing patches are encountered: parasitoids increase foraging efficiency by leaving earlier when patch encounter rates become higher. The mechanisms by which these often tiny insects can assess patch encounter rates have not been thoroughly investigated so far. The aim of the present study, where females of the braconid wasp Asobara tabida encountered patches after varying time intervals, was to measure the shape of the travel-time response curve and to analyse how information on inter-patch distances is translated into foraging behaviour. I examined several proxies for travel-time duration, like those of physiological nature as egg content, cues of senescence, amount of energy spent, or muscle fatigue, as well as true cognitive mechanisms, like measurement of distance or interval timing. Constraints in the wasp's ability to detect patch borders accurately after travelling, e.g. habituation to the patch odour or receptor blocking, are also discussed. From the data presented, most of the above-mentioned mechanisms and constraints can be rejected to work for A. tabida. The effects of inter-patch travel time are strongest when they are short, and even though it cannot be excluded that time measures are processed using an internal clock, I suggest that a Bayesian-like mechanism of timing, the biological basis of which might involve the build-up of neurosecretory material, is the most likely candidate influencing leaving decisions in A. tabida.

Decision-making dynamics in parasitoids of Drosophila.

Drosophilids and their associated parasitoids live in environments that vary in resource availability and quality within and between generations. The use of information to adapt behavior to the current environment is a key feature under such circumstances and Drosophila parasitic wasps are excellent model systems to study learning and information use. They are among the few parasitoid model species that have been tested in a wide array of situations. Moreover, several related species have been tested under similar conditions, allowing the analysis of within and between species variability, the effect of natural selection in a typical environment, the current physiological status, and previous experience of the individual. This holds for host habitat and host location as well as for host choice and search time allocation. Here, we review patterns of learning and memory, of information use and updating mechanisms, and we point out that information use itself is under strong selective pressure and thus, optimized by parasitic wasps.