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1.
Biochemistry (Mosc) ; 83(2): 107-118, 2018 Feb.
Article in English | MEDLINE | ID: mdl-29618297

ABSTRACT

Multiple myeloma nephropathy occurs due to the aggregate formation by monoclonal immunoglobulin light chains (Bence-Jones proteins) in kidneys of patients with multiple myeloma. The mechanism of amyloid deposit formation is still unclear. Earlier, the key role in the fibril formation has been assigned to the variable domains that acquired amyloidogenic properties as a result of somatic mutations. However, fibril formation by the Bence-Jones protein BIF was found to be the function of its constant domain. The substitution of Ser177 by Asn in the constant domain of the BIF protein is most likely an inherited than a somatic mutation. To study the role of this mutation in amyloidogenesis, the recombinant Bence-Jones protein BIF and its mutant with the N177S substitution typical for the known immunoglobulin Cκ allotypes Km1, Km1,2, and Km3 were isolated. The morphology of aggregates formed by the recombinant proteins under conditions similar to those occurring during the protein transport in bloodstream and its filtration into the renal glomerulus, in the distal tubules, and in the proximal renal tubules was analyzed by atomic force microscopy. The nature of the aggregates formed by BIF and its N177S mutant during incubation for 14 days at 37°C strongly differed and depended on both pH and the presence of a reducing agent. BIF formed fibrils at pH 7.2, 6.5, and 10.1, while the N177S mutant formed fibrils only at alkaline pH 10.1. The refolding of both proteins in the presence of 5 mM dithiothreitol resulted in the formation of branched structures.


Subject(s)
Bence Jones Protein/genetics , Bence Jones Protein/metabolism , Protein Aggregates/genetics , Bence Jones Protein/chemistry , Escherichia coli/metabolism , Humans , Hydrogen-Ion Concentration , Microscopy, Atomic Force , Mutagenesis, Site-Directed , Plasmids/genetics , Plasmids/metabolism , Pressure , Protein Refolding , Recombinant Proteins/biosynthesis , Recombinant Proteins/chemistry , Recombinant Proteins/isolation & purification , Scattering, Small Angle , Time Factors , X-Ray Diffraction
2.
Lik Sprava ; (5-6): 140-3, 2015.
Article in Ukrainian | MEDLINE | ID: mdl-27089732

ABSTRACT

The paper discusses the appropriate use of terminology denoting different types and different ways of blood sampling those of its components with the semantic, phonetic and technological point of view.


Subject(s)
Blood Component Removal/methods , Cytapheresis/methods , Phlebotomy , Plasma Exchange/methods , Plasmapheresis/methods , Terminology as Topic , Blood Banking/methods , Blood Component Removal/instrumentation , Cytapheresis/instrumentation , Humans , Plasma Exchange/instrumentation , Plasmapheresis/instrumentation , Quality Control , Tissue and Organ Procurement
3.
Biofizika ; 52(2): 216-22, 2007.
Article in Russian | MEDLINE | ID: mdl-17477047

ABSTRACT

The structure of protein SI of Thermus thermophilus (M = 61 kDa) in solution at low and moderate ionic strengths (0 M and 100 mM NaCl, respectively) has been studied by small-angle X-ray and neutron scattering. It was found that protein S1 has a globular conformation under both ionic conditions. The modelling of different packing of six homologous domains of S1 on the basis of the NMR-resolved structure of one domain showed that the best fit of calculated scattering patterns from such complexes to experimental ones is observed at a compact package of the domains. The calculated value of the radius of gyration of the models is 28-29 angtroms, which is characteristic for globular proteins with a molecular mass of about 60 kDa. It was found that protein S1 has a tendency to form associates, and the type of the associate depends on ionic strength. These associates have, in general, two or three monomers at a moderate ionic strength, while at a low ionic strength the number of monomers exceeds three and they are packed in a compact manner. Strongly elongated associates were observed in neutron experiments at a moderate ionic strength in heavy water. The association of protein molecules was also confirmed by the data of dynamic light scattering. From these data, the translational diffusion coefficient of protein S1 at a moderate ionic strength was calculated to be (D20,w = (2.7 +/- 0.1) x 10(-7)cm2/s). This value is essentially smaller than the expected value (D20,w = (5.8 - 6.0) x 10(-7)cm2/s) for the S1 monomer in the globular conformation, indicating the association of protein molecules under equilibrium conditions.


Subject(s)
Ribosomal Proteins/chemistry , Thermus thermophilus/metabolism , Molecular Weight , Nuclear Magnetic Resonance, Biomolecular , Osmolar Concentration , Protein Conformation , Protein Folding , Sodium Chloride/chemistry , Solutions
4.
Arch Dermatol Res ; 297(4): 147-53, 2005 Oct.
Article in English | MEDLINE | ID: mdl-16205932

ABSTRACT

Chronic exposure of the skin to sunlight causes damage to the underlying connective tissue with a loss of elasticity and firmness. Silicon (Si) was suggested to have an important function in the formation and maintenance of connective tissue. Choline-stabilized orthosilicic acid ("ch-OSA") is a bioavailable form of silicon which was found to increase the hydroxyproline concentration in the dermis of animals. The effect of ch-OSA on skin, nails and hair was investigated in a randomized, double blind, placebo-controlled study. Fifty women with photodamaged facial skin were administered orally during 20 weeks, 10 mg Si/day in the form of ch-OSA pellets (n=25) or a placebo (n=25). Noninvasive methods were used to evaluate skin microrelief (forearm), hydration (forearm) and mechanical anisotropy (forehead). Volunteers evaluated on a virtual analog scale (VAS, "none=0, severe=3") brittleness of hair and nails. The serum Si concentration was significantly higher after a 20-week supplementation in subjects with ch-OSA compared to the placebo group. Skin roughness parameters increased in the placebo group (Rt:+8%; Rm: +11%; Rz: +6%) but decreased in the ch-OSA group (Rt: -16%; Rm: -19%; Rz: -8%). The change in roughness from baseline was significantly different between ch-OSA and placebo groups for Rt and Rm. The difference in longitudinal and lateral shear propagation time increased after 20 weeks in the placebo group but decreased in the ch-OSA group suggesting improvement in isotropy of the skin. VAS scores for nail and hair brittleness were significantly lower after 20 weeks in the ch-OSA group compared to baseline scores. Oral intake of ch-OSA during the 20 weeks results in a significant positive effect on skin surface and skin mechanical properties, and on brittleness of hair and nails.


Subject(s)
Choline , Hair/drug effects , Nails/drug effects , Silicic Acid/administration & dosage , Skin/drug effects , Skin/radiation effects , Ultraviolet Rays/adverse effects , Administration, Oral , Adult , Aged , Biomechanical Phenomena , Double-Blind Method , Face , Female , Hair/pathology , Hair/physiopathology , Humans , Hydroxyproline/metabolism , Middle Aged , Nails/pathology , Nails/physiopathology , Silicic Acid/pharmacology , Silicic Acid/therapeutic use , Silicon/blood , Skin/metabolism , Skin/pathology , Time Factors
5.
Ter Arkh ; 76(5): 11-5, 2004.
Article in Russian | MEDLINE | ID: mdl-15230124

ABSTRACT

AIM: To study content and clinical correlations of sTNF-RI in patients with systemic sclerosis (SS). MATERIAL AND METHODS: Thirty nine SS patients were examined with enzyme immunoassay for serum levels of sTNF-RI and soluble adhesion molecules (sSAM) sVSAM-1, sISAM-1 and sR-selectine using R&D System kits (USA). The control group consisted of 14 healthy subjects (donors). Content of sTNF-RI and sSAM was considered as elevated if it exceeded relevant mean values by 1SD. RESULTS: sTNF-RI content was significantly higher in the patients than in the controls (p = 0.0001) and was similar in patients with diffuse and limited forms of the disease. A rise in sTNF-RI correlated with a rise in pulmonary artery pressure. In patients with pulmonary hypertension or restrictive pulmonary affection sTNF-RI was higher than in patients free of pulmonary hypertension or impaired external respiration function. A marked correlation was found between sTNF-RI and sVSAM-1. Patients with high CRP had significantly higher sTNF-RI level than patients with normal CRP. CONCLUSION: SS is characterized by elevated content of sTNF-RI. This content may serve a diagnostic marker of the disease progression.


Subject(s)
Receptors, Tumor Necrosis Factor, Type I/blood , Scleroderma, Systemic/blood , Adult , Aged , Biomarkers/blood , Female , Humans , Male , Middle Aged , Scleroderma, Systemic/complications
6.
Klin Med (Mosk) ; 81(10): 43-7, 2003.
Article in Russian | MEDLINE | ID: mdl-14664174

ABSTRACT

The aim of the trial was to study clinical significance of estimation of cell adhesion soluble molecules (CASM) in scleroderma systematica (SS). Quantitation of CASM VCAM-1, ICAM-1 and R-selectin was made with enzyme-immunoassay (R&D System kits, USA) in 38 patients with SS (11 with limited SS and 27 with diffuse SS). The levels of VCAM-1, ICAM-1 and R-selectin was elevated in 30 (79%), 17 (45%) and 20 (53%) patients, respectively. Mean values of VCAM-1 and ICAM-1 in patients were significantly higher than in healthy donors. R-selectin was also higher but insignificantly. A mean CASM level and a relative number of patients with elevated count of CASM in patients with diffuse and limited forms of SS did not differ. In 15 patients with active (progressive) course of the disease the level of VCAM-1 was significantly higher than in patients with chronic (non-progressive) course of SS while concentrations of ICAM-1 and R-selectine were almost the same. Thus, SS patients have elevated levels of CASM. CASM VCAM-1 concentration is the most sensitive marker of SS activity compared to other CASM.


Subject(s)
Cell Adhesion Molecules/blood , Scleroderma, Systemic/blood , Adult , Aged , Female , Humans , Intercellular Adhesion Molecule-1/blood , Male , Middle Aged , P-Selectin/blood , Scleroderma, Systemic/metabolism , Vascular Cell Adhesion Molecule-1/blood
8.
Klin Med (Mosk) ; 81(12): 4-7, 2003.
Article in Russian | MEDLINE | ID: mdl-14971148

ABSTRACT

The authors present the review of the literature on the role of tumor necrosis factor alpha (TNF alpha) in scleroderma systematica (SS). It is shown that TNF alpha participates in activation of vascular endothelium, regulation of immune response and metabolism of the connective tissue by modulation of fibroblastic function. SS patients exhibit a systemic and local rise of TNF alpha content. This rise contributes to SS progression, development of fibrosing alveolitis and skin fibrous alterations in Raynaud's syndrome.


Subject(s)
Endothelium, Vascular/metabolism , Scleroderma, Systemic/immunology , Scleroderma, Systemic/metabolism , Tumor Necrosis Factor-alpha/metabolism , Disease Progression , Endothelium, Vascular/immunology , Endothelium, Vascular/physiopathology , Fibroblasts/metabolism , Fibrosis , Humans , Immunity, Cellular , Pulmonary Fibrosis/metabolism , Scleroderma, Systemic/physiopathology , Skin/metabolism , Skin/pathology , Tumor Necrosis Factor-alpha/immunology
9.
Biochemistry ; 41(51): 15342-9, 2002 Dec 24.
Article in English | MEDLINE | ID: mdl-12484773

ABSTRACT

The conformation of mammalian elongation factor eEF1A in solution was examined by the small angle neutron scattering and scanning microcalorimetry. We have found that in contrast to the bacterial analogue the eEF1A molecule has no fixed rigid structure in solution. The radius of gyration of the eEF1A molecule (5.2 nm) is much greater than that of prokaryotic EF1A. The specific heat of denaturation is considerably lower for eEF1A than for EF1A, suggesting that the eEF1A conformation is significantly more disordered. Despite its flexible conformation, eEF1A is found to be highly active in different functional tests. According to the neutron scattering data, eEF1A becomes much more compact in the complex with uncharged tRNA. The absence of a rigid structure and the possibility of large conformational change upon interaction with a partner molecule could be important for eEF1A functioning in channeled protein synthesis and/or for the well-known capability of the protein to interact with different ligands besides the translational components.


Subject(s)
Peptide Elongation Factor 1/chemistry , Animals , Bacterial Proteins/chemistry , Bacterial Proteins/physiology , Calorimetry/methods , Guanosine Diphosphate/chemistry , Neutrons , Peptide Biosynthesis , Peptide Elongation Factor 1/analogs & derivatives , Peptide Elongation Factor 1/physiology , Protein Conformation , Protein Structure, Tertiary , RNA, Transfer, Amino Acyl/chemistry , Rabbits , Scattering, Radiation , Solutions , Thermus thermophilus
10.
FEBS Lett ; 471(2-3): 211-4, 2000 Apr 14.
Article in English | MEDLINE | ID: mdl-10767425

ABSTRACT

GroES consists of seven identical 10 kDa subunits and is involved in assisting protein folding as the partner of another oligomeric protein, the GroEL chaperonin. Here we studied the GroES structure in solution using small-angle X-ray scattering (SAXS). The SAXS pattern, calculated for the GroES crystal structure, was found to be different from the experimental one measured in solution. The synchronic shift in the radial direction and some turning of the protein subunits eliminate the difference and result in the increase of the hole diameter in the GroES ring-like structure from 8 A in the crystal to 21 A in solution.


Subject(s)
Chaperonin 10/chemistry , Chaperonin 10/metabolism , Escherichia coli/chemistry , Crystallography, X-Ray , Models, Molecular , Molecular Weight , Protein Structure, Quaternary , Rotation , Sensitivity and Specificity , Solutions , X-Ray Diffraction
11.
Proteins ; 28(2): 194-201, 1997 Jun.
Article in English | MEDLINE | ID: mdl-9188737

ABSTRACT

In an earlier publication [Serdyuk, I.N. et al., Biofizika, in press, 1997] we demonstrated that the asymmetry extent of globular proteins does not change with increasing their sizes, and the observed nontrivial dependence of the protein accessible surface area on the molecular mass [Miller, S., J. Mol. Biol. 196:641-656, 1987] (A(s) - M dependence) is a reflection of the protein surface relief peculiarities. To clarify these peculiarities, an analysis of the molecular surface on the basis of high-resolution x-ray data has been done for 25 globular proteins not containing prosthetic groups. The procedure was based on studying the dependence of the minimal number (N) of probe bodies (here cubes) covering the entire protein surface, both on their size (N - R dependence) and on the value of dry protein volume (N - V dependence). Two levels of protein surface organization have been detected by molecular surface analysis. On the micro scale (2-7 A), the surface is characterized by a D = 2.1 fractal dimension which is intrinsic to surfaces with weak deformations and reflects the local atomic group packing. On the macro scale, large-scale surface defects are revealed that are interpreted as the result of secondary structure elements packing. A simple model of protein surface representation reflecting large-scale irregularities has been proposed.


Subject(s)
Proteins/chemistry , Fractals , Protein Conformation , Protein Folding , X-Ray Diffraction
12.
Klin Med (Mosk) ; 75(10): 46-9, 1997.
Article in Russian | MEDLINE | ID: mdl-9490340

ABSTRACT

Fasting motility of the stomach and small intestine and that after carbohydrate, protein and fat meals were studied with tubes furnished with tensometers over 24-50 hours in 7 healthy and 31 duodenal ulcer males. Over the first night 7 healthy and 17 ulcer subjects were subjected to polygraphic sleep registration including electroencephalogram. Sleep quality was assessed by means of biorhythmologic questionnaire. Time co-incidence was registered for the most active phases of 90-min rhythms of the sleep and periodic gastrointestinal activity. In patients with poor sleep the pattern of periodic motility cycles was abnormal, motility of the jejunal proximal part was inhibited in some time intervals after carbohydrate and protein meals. All the patients with ulcer and sleep disorders received recommendations to take therapeutic measures for sleep normalization.


Subject(s)
Duodenal Ulcer/complications , Gastrointestinal Motility , Intestine, Small/physiopathology , Sleep Wake Disorders/complications , Stomach/physiopathology , Adolescent , Adult , Duodenal Ulcer/physiopathology , Fasting/physiology , Gastrointestinal Motility/physiology , Humans , Male , Middle Aged , Sleep Wake Disorders/physiopathology
13.
Biofizika ; 42(6): 1197-207, 1997.
Article in Russian | MEDLINE | ID: mdl-9490107

ABSTRACT

The area and volume of the approximating ellipsoids taken from low resolution X-ray data have been calculated for 65 globular proteins. It has been shown that the dependence of these values on the protein molecular mass (M) coincides with those for even isometric bodies. This indicates that the asymmetry of globular proteins does not grow with the increase of their sizes. At the same time the 0.73 slope of the log-log dependence of the accessible surface area (A(s)) on the protein molecular mass differing from the value of 0.67 for even isometric bodies was observed (Miller S. et al., J. Mol. Biol. 1987. V.196. P.641). This can be explained by peculiarities of the protein surface. The method of molecule shape recovery by spherical harmonics has shown that the domain organization of protein molecule cannot explain the observed difference. Therefore the more detailed analysis of protein surface structure would be necessary.


Subject(s)
Models, Molecular , Proteins/chemistry
14.
J Mol Biol ; 262(4): 559-74, 1996 Oct 04.
Article in English | MEDLINE | ID: mdl-8893863

ABSTRACT

Various conformational states of polypeptide chains were investigated by synchrotron small-angle X-ray scattering (SAXS). SAXS patterns of proteins and model polypeptides in globular states (native and "molten globule") and in non-globular states (unfolded protein as well as randomly coiled, partially alpha-helical and partially beta-structural synthetic polypeptides) were analyzed in terms of Guinier and Kratky plots. Large differences in the SAXS pattern have been found between globular and non-globular conformations of the polypeptide chains, and they have been interpreted in terms of differences in the shape and size of the globular and non-globular scatterers with the same molecular mass. The equilibrium and time-resolved unfolding curves of bovine carbonic anhydrase and yeast phosphoglycerate kinase were monitored by integrated SAXS intensity, and were found to be coincident with the curves measured by other physicochemical techniques, such as tryptophan fluorescence and peptide circular dichroism spectra. The intermolecular association of the protein "molten globule"-like intermediates accumulated during the guanidine hydrochloride-induced unfolding of bovine carbonic anhydrase has been investigated by various SAXS parameters. It has been shown that the integrated SAXS intensity is much less sensitive to the protein intermolecular association than the zero angle intensity and the radius of gyration. We propose the integrated SAXS intensity as a global parameter which is particularly appropriate for fast kinetic studies of protein coil to globule transitions. Time-resolved refolding curves of the above proteins were monitored by the integrated SAXS intensity to investigate the globularization process in protein folding. Two fast kinetic processes for bovine carbonic anhydrase and two fast (each within two seconds) as well as two slow (within 500 seconds) kinetic processes for yeast phosphoglycerate kinase have been recorded. The kinetic processes reflect both protein intramolecular globularization and its intermolecular association.


Subject(s)
Protein Conformation , Synchrotrons , Animals , Cattle , Molecular Weight , Polyglutamic Acid/chemistry , Polylysine/chemistry , Scattering, Radiation
15.
Bioorg Khim ; 22(6): 420-4, 1996 Jun.
Article in Russian | MEDLINE | ID: mdl-8975670

ABSTRACT

The conformation of a chicken egg lysozyme molecule (dimensions, stoichiometry of its associates, and the degree of helicity) in DMSO was studied by small-angle neutron scattering, dynamic light scattering, and optical rotatory dispersion in the visible region of the spectrum. At high DMSO concentrations (70%), the protein was shown to exist as a dimer. The monomer molecules in the dimer adopt a partially unfolded conformation, with dimensions substantially greater than those in the native state and a high content of secondary structure (the degree of helicity is close to that of native lysozyme). This approach provides a unique possibility to assess the compactness of molecules in associates, which may be very useful in studying protein self-organization.


Subject(s)
Dimethyl Sulfoxide/chemistry , Muramidase/chemistry , Protein Folding , Animals , Chickens , Light , Neutrons , Protein Structure, Secondary , Scattering, Radiation
16.
Ukr Biokhim Zh (1978) ; 68(1): 81-4, 1996.
Article in Russian | MEDLINE | ID: mdl-8755107

ABSTRACT

Peculiarities of allergens extraction from the intact and destructed pollen grains of Ambrosia artemisiifolia L. have been studied, and the effect of the content of extracting buffer on stability of the obtained allergen extracts has been investigated. It is established that mechanical destruction of pollen during extraction permits decreasing protein output, increasing specific activity of the extracts and accelerating the procedure of their production. Introduction of some protective additions to the composition of the extracting buffer permits essentially increasing stability of the extracts under long-term storage at 4 degrees C.


Subject(s)
Allergens/isolation & purification , Plant Extracts/isolation & purification , Pollen/immunology , Biomechanical Phenomena , Buffers
17.
Stomatologiia (Mosk) ; 73(4): 50-1, 1994.
Article in Russian | MEDLINE | ID: mdl-7732535

ABSTRACT

Adhesion, functional adhesion, and observation of mechanical regularities during repair of dentition in patients with complete loss of teeth ensure stability of complete dentures and, hence, their functional value. Since functional adhesion is frequently impossible to provide as far as it concerns the lower denture, such dentures are always liable to the action of dumping force. The authors describe a method for making artificial teeth of complete removable dentures with due consideration for the individual force of occlusion of the jaws and the teeth inclination angle determined individually for each patient.


Subject(s)
Denture Design , Denture, Complete , Tooth, Artificial , Aged , Bite Force , Female , Humans , Male , Middle Aged , Mouth, Edentulous/physiopathology , Mouth, Edentulous/rehabilitation
18.
Biopolymers ; 33(11): 1747-55, 1993 Nov.
Article in English | MEDLINE | ID: mdl-8241431

ABSTRACT

The urea-induced unfolding of 16S RNA at low ionic strength has been studied by dynamic light scattering, uv spectroscopy, and some hydrodynamic methods. Three components could be resolved in the photon correlation spectra of scattered light, using the inverse Laplace transform SIPP program [G.R. Danovich and I.N. Serdyuk (1983) in Photon Correlation Techniques in Fluid Mechanics, vol. B38, E.O. Schulz-Dubois, Ed., Springer, Berlin/Heidelberg, New York, p. 315]. One component is assigned to the center-of-mass translation of the RNA, another one to a combination of translational and internal motion, and the last to diffusion of urea clusters. The hydrodynamic dimensions of RNA increase strongly upon transition from 4 to 6 M urea. We conclude that up to 2 M urea, 16S RNA is highly elongated, and coiled above 4 M urea, with a great increase of the hydrodynamic dimensions of RNA being observed upon transition from 4 to 6 M urea. A scheme for RNA unfolding is proposed.


Subject(s)
Escherichia coli/ultrastructure , Nucleic Acid Conformation/drug effects , RNA, Ribosomal, 16S/chemistry , RNA, Ribosomal, 16S/drug effects , Urea/pharmacology , Escherichia coli/drug effects
19.
Klin Khir (1962) ; (7-8): 34-7, 1993.
Article in Russian | MEDLINE | ID: mdl-8139190

ABSTRACT

On the basis of the data of clinical, bacteriologic, immunologic investigations, the system for prevention of purulent-inflammatory complications (PIC) in treatment of closed and open fractures of the extremities has been developed. Use in the clinic of a system for prophylaxis permitted to reduce the incidence of PIC development in operative treatment of closed fractures from 5.6 to 1.64%, after performance of the emergency operations for open injuries--from 18.3 to 5.4%.


Subject(s)
Anti-Bacterial Agents/therapeutic use , Extremities/injuries , Fractures, Closed/therapy , Fractures, Open/therapy , Wound Infection/prevention & control , Fractures, Closed/complications , Fractures, Open/complications , Humans , Postoperative Complications/immunology , Postoperative Complications/microbiology , Postoperative Complications/pathology , Postoperative Complications/prevention & control , Suppuration , Traumatology , Wound Infection/immunology , Wound Infection/microbiology , Wound Infection/pathology
20.
Med Parazitol (Mosk) ; (2): 20-1, 1992.
Article in Russian | MEDLINE | ID: mdl-1435528

ABSTRACT

The analysis of literature data and the authors' own investigations showed that the southern part of the Ukraine is a trichinelliasis endemic territory where the synanthropic foci of the invasion are registered. The wide spreading of trichinelliasis among pigs and the nonobservance of the control measures provided by the veterinary legislation cause an increase in human prevalence.


Subject(s)
Trichinellosis/epidemiology , Animals , Disease Reservoirs , Humans , Prevalence , Swine , Swine Diseases/epidemiology , Trichinellosis/veterinary , Ukraine/epidemiology
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