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1.
J Med Entomol ; 61(2): 512-516, 2024 Mar 13.
Article in English | MEDLINE | ID: mdl-38150320

ABSTRACT

Ticks (Family Ixodidae) spend most of their life cycle as immature stages in the soil and litter, and as any other soil invertebrates, are likely to be controlled top-down by soil-dwelling predators. To date, the ability of soil invertebrate predators to control ixodid tick population remains little known, partly due to methodological difficulties. In the current study, we developed and successfully tested a novel method of labeling live Ixodes ricinus (L., 1758) (Ixodida: Ixodidae) nymphs with a 15N isotope label. Labeled ticks were used in a small-scale 8-day-long microcosm experiment to reveal soil predators attacking nymphs. Only a small fraction (4.1% of all samples) of soil generalist predators preyed upon nymphs. A strong 15N label was found in 5 predator species, namely 2 spiders (Pachygnatha listeri Sundevall, 1830, Tetragnathidae and Ozyptila sp., Theridiidae), 2 gamasid mites (Pergamasus beklemischevi Sellnick, 1929 and Pergamasus quisquiliarum [Canestrini, 1882], Parasitidae), and 1 staphylinid beetle (Geostiba circellaris [Gravenhorst, 1806], Staphylinidae). The isotopic labeling can be a useful tool in revealing a range of invertebrate predators that can control tick populations in soil.


Subject(s)
Coleoptera , Ixodes , Ixodidae , Animals , Soil , Isotope Labeling , Nymph
2.
Isotopes Environ Health Stud ; 59(2): 180-191, 2023 May.
Article in English | MEDLINE | ID: mdl-36821423

ABSTRACT

Eurasian red squirrels Sciurus vulgaris have unusually high δ13C values compared to other forest rodents, which is seemingly related to the consumption of 13C-enriched conifer seeds. To test this hypothesis, we analyzed the hair of wild and zoo-kept red squirrels, seeds of pine and spruce, and feathers of specialized and opportunistic consumers of conifer seeds, crossbills Loxia spp., and woodpeckers Dendrocopos major. Data on the isotopic composition (δ13C and δ15N values) of hair or feathers of other species of forest rodents and birds were obtained from published studies. The range of mean δ13C values of hair of wild forest rodents (19 species) exceeded 10 ‰. All squirrel species had high 13C content, S. vulgaris having maximum δ13C values. In contrast, S. vulgaris kept in captivity had an isotopic composition similar to other captive rodents. The feathers of crossbills were enriched in 13C compared to other forest birds (15 species), while seeds of coniferous trees often had higher δ13C values compared to seeds of other woody plants. Distinctiveness of the isotopic composition of mammals and birds feeding on the seeds of coniferous trees suggests that this resource can be traced through the entire forest food web.


Subject(s)
Tracheophyta , Animals , Sciuridae , Seeds , Forests , Feathers , Trees
3.
Mycorrhiza ; 33(1-2): 59-68, 2023 Mar.
Article in English | MEDLINE | ID: mdl-36662299

ABSTRACT

Mycorrhizal fungi represent a potentially abundant carbon resource for soil animals, but their role in soil food webs remains poorly understood. To detect taxa that are trophically linked to the extraradical mycelium of mycorrhizal fungi, we used stable isotope (13C) labelling of whole trees in combination with the in-growth mesh bag technique in two coniferous forests. This allowed us to detect the flux of carbon in the mycelium of mycorrhizal fungi, and consequently in the tissues of soil invertebrates. The mycorrhizal fungal genera constituted 93.5% of reads in mycelium samples from the in-growth mesh bags. All mycelium from in-growth mesh bags and about 32% of the invertebrates sampled (in total 11 taxa) received the 13C label after 45 days of exposure. The extent of feeding of soil invertebrates on the mycelium of mycorrhizal fungi depended on the taxonomic affinity of the animals. The strongest trophic link to the mycorrhiza-derived carbon was detected in Isotomidae (Collembola) and Oppiidae (Oribatida). The label was also observed in the generalist predators, indicating the propagation of mycorrhiza-derived carbon into the higher trophic levels of the soil food web. Higher 13C labelling in the tissues of euedaphic Collembola and Oribatida compared to atmobiotic and hemiedaphic families indicates the importance of mycorrhizal fungi as a food resource for invertebrates in deeper soil horizons.


Subject(s)
Mycorrhizae , Tracheophyta , Animals , Soil , Soil Microbiology , Invertebrates , Forests , Carbon
4.
Biodivers Data J ; 11: e105314, 2023.
Article in English | MEDLINE | ID: mdl-38327301

ABSTRACT

Background: The Mekong River is the 10th largest river in the world. It is recognised as the most productive river in Southeast Asia and economically essential to the region, with an estimated 60-65 million people living in the lower Mekong Basin. The Mekong Delta within Vietnam is considered a highly vulnerable ecosystem under threat from increasing anthropogenic pressure, such as dam construction and, as a consequence, the Delta is sinking and altering the natural hydrological cycle. Dams also lead to eutrophication and pollution of downstream water from regulated water flux and water stagnation. Another threat is climate change coupled with the lower rainfall, which could lead to an increased risk of drought in the Mekong Delta Basin. Thus, these project data represent an important baseline reference. The ecological health of the Mekong Delta's environment, as indicated by the quality and availability of its water and biological resources, largely determines the economic and social development of the region, which produces about half of the agriculture and aquaculture products of Vietnam. New information: This paper reports quantitative data on the biodiversity of six groups of aquatic organisms: bottom and pelagic fish, macrozoobenthos, microorganisms, phyto- and zooplankton in the Mekong Delta within Vietnam, as well as data on the physicochemical parameters of water and bottom sediments. The data were collected during 2018-2022 as part of the Ecolan E-3.4 programme within the framework of the research plan of the Joint Russian-Vietnamese Tropical Research and Technological Center. All presented datasets are published for the first time.

5.
Zookeys ; 1169: 95-162, 2023.
Article in English | MEDLINE | ID: mdl-38328027

ABSTRACT

Terrestrial crustaceans are represented by approximately 4,900 species from six main lineages. The diversity of terrestrial taxa ranges from a few genera in Cladocera and Ostracoda to about a third of the known species in Isopoda. Crustaceans are among the smallest as well as the largest terrestrial arthropods. Tiny microcrustaceans (Branchiopoda, Ostracoda, Copepoda) are always associated with water films, while adult stages of macrocrustaceans (Isopoda, Amphipoda, Decapoda) spend most of their lives in terrestrial habitats, being independent of liquid water. Various adaptations in morphology, physiology, reproduction, and behavior allow them to thrive in virtually all geographic areas, including extremely arid habitats. The most derived terrestrial crustaceans have acquired highly developed visual and olfactory systems. The density of soil copepods is sometimes comparable to that of mites and springtails, while the total biomass of decapods on tropical islands can exceed that of mammals in tropical rainforests. During migrations, land crabs create record-breaking aggregations and biomass flows for terrestrial invertebrates. The ecological role of terrestrial microcrustaceans remains poorly studied, while omnivorous macrocrustaceans are important litter transformers and soil bioturbators, occasionally occupying the position of the top predators. Notably, crustaceans are the only group among terrestrial saprotrophic animals widely used by humans as food. Despite the great diversity and ecological impact, terrestrial crustaceans, except for woodlice, are often neglected by terrestrial ecologists. This review aims to narrow this gap discussing the diversity, abundance, adaptations to terrestrial lifestyle, trophic relationships and ecological functions, as well as the main methods used for sampling terrestrial crustaceans.

6.
Viruses ; 14(5)2022 04 21.
Article in English | MEDLINE | ID: mdl-35632601

ABSTRACT

Modern metagenomic approaches enable the effective discovery of novel viruses in previously unexplored organisms. Termites are significant ecosystem converters and influencers. As with the majority of tropical forest insects, termites are studied insufficiently, and termite virome remains especially understudied. Here, we studied the virome of lichenophagous and mycophagous termites (Hospitalitermes bicolor, Macrotermes carbonarius and Odontotermes wallonensis) collected in the Cat Tien National Park (Vietnam). We assembled four full genomes of novel viruses related to Solemoviridae, Lispiviridae, Polycipiviridae and Kolmioviridae. We also found several contigs with relation to Chuviridae and Deltaflexiviridae that did not correspond to complete virus genomes. All the novel viruses clustered phylogenetically with previously identified viruses of the termites. Deltaflexi-like contigs were identified in the fungi-cultivating M. carbonarius and showed homology with viruses recently discovered in the edible basidiomycete mushrooms.


Subject(s)
Isoptera , RNA Viruses , Animals , Ecosystem , Forests , Vietnam , Virome
7.
Biol Rev Camb Philos Soc ; 97(3): 1057-1117, 2022 06.
Article in English | MEDLINE | ID: mdl-35060265

ABSTRACT

Soil organisms drive major ecosystem functions by mineralising carbon and releasing nutrients during decomposition processes, which supports plant growth, aboveground biodiversity and, ultimately, human nutrition. Soil ecologists often operate with functional groups to infer the effects of individual taxa on ecosystem functions and services. Simultaneous assessment of the functional roles of multiple taxa is possible using food-web reconstructions, but our knowledge of the feeding habits of many taxa is insufficient and often based on limited evidence. Over the last two decades, molecular, biochemical and isotopic tools have improved our understanding of the feeding habits of various soil organisms, yet this knowledge is still to be synthesised into a common functional framework. Here, we provide a comprehensive review of the feeding habits of consumers in soil, including protists, micro-, meso- and macrofauna (invertebrates), and soil-associated vertebrates. We have integrated existing functional group classifications with findings gained with novel methods and compiled an overarching classification across taxa focusing on key universal traits such as food resource preferences, body masses, microhabitat specialisation, protection and hunting mechanisms. Our summary highlights various strands of evidence that many functional groups commonly used in soil ecology and food-web models are feeding on multiple types of food resources. In many cases, omnivory is observed down to the species level of taxonomic resolution, challenging realism of traditional soil food-web models based on distinct resource-based energy channels. Novel methods, such as stable isotope, fatty acid and DNA gut content analyses, have revealed previously hidden facets of trophic relationships of soil consumers, such as food assimilation, multichannel feeding across trophic levels, hidden trophic niche differentiation and the importance of alternative food/prey, as well as energy transfers across ecosystem compartments. Wider adoption of such tools and the development of open interoperable platforms that assemble morphological, ecological and trophic data as traits of soil taxa will enable the refinement and expansion of the multifunctional classification of consumers in soil. The compiled multifunctional classification of soil-associated consumers will serve as a reference for ecologists working with biodiversity changes and biodiversity-ecosystem functioning relationships, making soil food-web research more accessible and reproducible.


Subject(s)
Ecosystem , Soil , Animals , Food Chain , Habits , Humans , Vertebrates
8.
Sci Rep ; 12(1): 321, 2022 01 10.
Article in English | MEDLINE | ID: mdl-35013362

ABSTRACT

Forest canopy is densely populated by phyto-, sapro-, and microbiphages, as well as predators and parasitoids. Eventually, many of crown inhabitants fall down, forming so-called 'arthropod rain'. Although arthropod rain can be an important food source for litter-dwelling predators and saprophages, its origin and composition remains unexplored. We measured stable isotope composition of the arthropod rain in a temperate mixed forest throughout the growing season. Invertebrates forming arthropod rain were on average depleted in 13C and 15N by 1.6‰ and 2.7‰, respectively, compared to the soil-dwelling animals. This difference can be used to detect the contribution of the arthropod rain to detrital food webs. Low average δ13C and δ15N values of the arthropod rain were primarily driven by the presence of wingless microhytophages, represented mainly by Collembola and Psocoptera, and macrophytophages, mainly aphids, caterpillars, and heteropterans. Winged arthropods were enriched in heavy isotopes relative to wingless specimens, being similar in the isotopic composition to soil-dwelling invertebrates. Moreover, there was no consistent difference in δ13C and δ15N values between saprophages and predators among winged insects, suggesting that winged insects in the arthropod rain represented a random assemblage of specimens originating in different biotopes, and are tightly linked to soil food webs.

9.
Ecology ; 102(8): e03421, 2021 08.
Article in English | MEDLINE | ID: mdl-34086977

ABSTRACT

Size-structured food webs form integrated trophic systems where energy is channeled from small to large consumers. Empirical evidence suggests that size structure prevails in aquatic ecosystems, whereas in terrestrial food webs trophic position is largely independent of body size. Compartmentalization of energy channeling according to size classes of consumers was suggested as a mechanism that underpins functioning and stability of terrestrial food webs including those belowground, but their structure has not been empirically assessed across the whole size spectrum. Here we used stable isotope analysis and metabolic regressions to describe size structure and energy use in eight belowground communities with consumers spanning 12 orders of magnitude in living body mass, from protists to earthworms. We showed a negative correlation between trophic position and body mass in invertebrate communities and a remarkable nonlinearity in community metabolism and trophic positions across all size classes. Specifically, we found that the correlation between body mass and trophic level is positive in the small-sized (protists, nematodes, arthropods below 1 µg in body mass), neutral in the medium-sized (arthropods of 1 µg to 1 mg), and negative in the large-sized consumers (large arthropods, earthworms), suggesting that these groups form compartments with different trophic organization. Based on this pattern, we propose a concept of belowground food webs being composed of (1) size-structured micro-food web driving fast energy channeling and nutrient release, for example in microbial loop; (2) arthropod macro-food web with no clear correlation between body size and trophic level, hosting soil arthropod diversity and subsidizing aboveground predators; and (3) "trophic whales," sequestering energy in their large bodies and restricting its propagation to higher trophic levels in belowground food webs. The three size compartments are based on a similar set of basal resources, but contribute to different ecosystem-level functions and respond differently to variations in climate, soil characteristics and land use. We suggest that the widely used vision of resource-based energy channeling in belowground food webs can be complemented with size-based energy channeling, where ecosystem multifunctionality, biodiversity, and stability are supported by a balance across individual size compartments.


Subject(s)
Food Chain , Nematoda , Animals , Biodiversity , Ecosystem , Soil
10.
Insects ; 11(12)2020 Dec 17.
Article in English | MEDLINE | ID: mdl-33348620

ABSTRACT

In Middle Asia, the dragonfly Pantala flavescens makes regular seasonal migrations. In spring, sexually mature dragonflies (immigrants) arrive in this region for reproduction. Dragonflies of the aboriginal generation (residents) develop in about two months, and migrate south in autumn. Residents of Middle Asia have significantly lower δ2H values (-123.5 (SD 17.2)‱, n = 53) than immigrants (-64.4 (9.7)‱, n = 12), as well as aboriginal dragonfly species from Ethiopia (-47.9 (10.8)‱, n = 4) and the Sahel zone (-50.1 (15.5)‱, n = 11). Phenological data on P. flavescens in the Afro-Asian region and a comparison with published isotopic data on migratory insects from this region suggest that (i) the probable area of origin of P. flavescens immigrants is located in tropical parts of East Africa and/or the Arabian Peninsula and (ii) the autumn migration of Middle Asian residents to the south may also pass through the Indian Ocean. We assume that in the Afro-Asian region, there is an extensive migration circle of P. flavescens covering East Africa, Central Asia and the Indian subcontinent with a total length of more than 14,000 km.

11.
Am Nat ; 194(6): 823-839, 2019 12.
Article in English | MEDLINE | ID: mdl-31738104

ABSTRACT

Do large organisms occupy higher trophic levels? Predators are often larger than their prey in food chains, but empirical evidence for positive body mass-trophic level scaling for entire food webs mostly comes from marine communities on the basis of unicellular producers. Using published data on stable isotope compositions of 1,093 consumer species, we explored how trophic level scales with body size, food web type (green vs. brown), and phylogenetic group across biomes. In contrast to widespread assumptions, the relationship between body size and trophic level of consumers-from protists to large vertebrates-was not significant per se but varied among ecosystem types and animal groups. The correlation between body size and trophic level was strong in marine consumers, weak in freshwater consumers, and absent in terrestrial consumers, which was also observed at the scale of local food webs. Vertebrates occupied higher trophic positions than invertebrates, and green trophic chains were longer than brown ones in aquatic (primarily marine) but not in terrestrial food webs. Variations in body size of top predators suggest that terrestrial and many freshwater food webs are size compartmentalized, implying different trophic dynamics and responses to perturbations than in size-structured marine food webs.


Subject(s)
Body Size , Food Chain , Phylogeny , Animals , Invertebrates/anatomy & histology , Invertebrates/physiology , Nitrogen Isotopes , Vertebrates/anatomy & histology , Vertebrates/physiology
12.
Mar Pollut Bull ; 146: 190-200, 2019 Sep.
Article in English | MEDLINE | ID: mdl-31426146

ABSTRACT

Organic pollution is a serious environmental problem for the coastal zones of seas. The study tested the hypothesis that allochthonous organic carbon derived from St. Petersburg wastewaters is a significant basal resource of carbon for the benthic food webs. We analyzed stable isotope composition of carbon and nitrogen in suspended organic matter in the Neva Estuary and in the tissues of macroinvertebrates and fish. The Stable Isotope Bayesian mixing model showed that waste waters were an important source of carbon for the most of consumers in the Neva Estuary. The autochthonous carbon produced by phytoplankton was a significant source of carbon only for some macroinvertebrates. The main consumers of the carbon derived from waste waters were tubificid worms, chironomid larvae and alien polychaete, which currently dominate in the zoobenthos of the estuary. These species replaced the former dominants, native crustaceans, which to a lesser extent use anthropogenic carbon.


Subject(s)
Carbon , Food Chain , Invertebrates , Animals , Bayes Theorem , Carbon/metabolism , Carbon Isotopes/analysis , Crustacea , Estuaries , Fishes , Models, Theoretical , Nitrogen Isotopes/analysis , Oceans and Seas , Phytoplankton , Russia , Wastewater/chemistry
13.
Exp Appl Acarol ; 78(1): 29-48, 2019 May.
Article in English | MEDLINE | ID: mdl-31089979

ABSTRACT

The trophic positions of the most abundant soil- and litter-dwelling oribatid mite species in a tropical monsoon forest in Dong Nai (Cat Tien) National Park, southern Vietnam, were estimated using stable isotope analysis. Previously published data and Layman's metrics were used to compare the structure of the 'isotopic trophic niches' and the range of resources used by Oribatida in the tropical forest to those observed in temperate forests. The range of trophic levels occupied by oribatid mites, as reflected in their nitrogen isotopic compositions, did not differ between tropical and temperate forests. In contrast, the range of δ13C values of oribatid mites in the tropical community was smaller than that typically observed in temperate forests. This was due to the lack of 13C-enriched species with strongly calcified integuments. The diversity of trophic niches and the range of resources consumed did not differ between temperate and tropical communities of Oribatida. Moreover, similar δ15N values were observed for oribatid mite families across temperate and tropical ecosystems, suggesting that the taxonomic system of soil- and litter-dwelling Oribatida is ecologically consistent and supporting the 'taxonomic sufficiency' principle.


Subject(s)
Biodiversity , Life History Traits , Mites/physiology , Animals , Ecosystem , Parks, Recreational , Vietnam
14.
Oecologia ; 189(2): 447-460, 2019 Feb.
Article in English | MEDLINE | ID: mdl-30659383

ABSTRACT

Quantification of the bacterial, fungal, and plant energy channels to the nutrition of detritivores is methodologically challenging. This is especially true for earthworms that ingest large amounts of litter and soil mixed with microorganisms. Novel methods such as compound-specific stable isotope analysis (CSIA) of C and N of individual amino acids promise major progress in this field in comparison with bulk stable isotope analysis (bulk SIA). Here, we combine CSIA and bulk SIA of carbon and nitrogen to quantify the linkage of epigeic and endogeic earthworm species to different energy channels across boreal and temperate forest ecosystems. The results showed pronounced flux of energy directly from plants to earthworms (33-50% of essential amino acids, EAA) refining the position of earthworms in soil food webs as both competitors and consumers of microorganisms. Epigeic earthworm species primarily relied on plant litter and endogeic species primarily relied on bacteria and soil organic matter. The linkage of both groups to plant or microbial energy channel was likely driven by the quality of detritus. Both bulk 15N and 13C enrichments were related to the trophic level of earthworms. Furthermore, 15N enrichment was related to the proportions of bacterial and plant EAA in the diet. Strong negative correlation between trophic level (CSIA of nitrogen) and the proportion of plant EAA (CSIA of carbon) suggests that both novel methods can indicate the degree of microbivory in detritivores. CSIA of amino acids provide detailed and baseline-independent information on basal resources and trophic levels of detritivores.


Subject(s)
Oligochaeta , Amino Acids , Animals , Ecosystem , Food Chain , Isotopes
15.
Biol Rev Camb Philos Soc ; 94(1): 37-59, 2019 Feb.
Article in English | MEDLINE | ID: mdl-29920907

ABSTRACT

Despite the major importance of soil biota in nutrient and energy fluxes, interactions in soil food webs are poorly understood. Here we provide an overview of recent advances in uncovering the trophic structure of soil food webs using natural variations in stable isotope ratios. We discuss approaches of application, normalization and interpretation of stable isotope ratios along with methodological pitfalls. Analysis of published data from temperate forest ecosystems is used to outline emerging concepts and perspectives in soil food web research. In contrast to aboveground and aquatic food webs, trophic fractionation at the basal level of detrital food webs is large for carbon and small for nitrogen stable isotopes. Virtually all soil animals are enriched in 13 C as compared to plant litter. This 'detrital shift' likely reflects preferential uptake of 13 C-enriched microbial biomass and underlines the importance of microorganisms, in contrast to dead plant material, as a major food resource for the soil animal community. Soil organic matter is enriched in 15 N and 13 C relative to leaf litter. Decomposers inhabiting mineral soil layers therefore might be enriched in 15 N resulting in overlap in isotope ratios between soil-dwelling detritivores and litter-dwelling predators. By contrast, 13 C content varies little between detritivores in upper litter and in mineral soil, suggesting that they rely on similar basal resources, i.e. little decomposed organic matter. Comparing vertical isotope gradients in animals and in basal resources can be a valuable tool to assess trophic interactions and dynamics of organic matter in soil. As indicated by stable isotope composition, direct feeding on living plant material as well as on mycorrhizal fungi is likely rare among soil invertebrates. Plant carbon is taken up predominantly by saprotrophic microorganisms and channelled to higher trophic levels of the soil food web. However, feeding on photoautotrophic microorganisms and non-vascular plants may play an important role in fuelling soil food webs. The trophic niche of most high-rank animal taxa spans at least two trophic levels, implying the use of a wide range of resources. Therefore, to identify trophic species and links in food webs, low-rank taxonomic identification is required. Despite overlap in feeding strategies, stable isotope composition of the high-rank taxonomic groups reflects differences in trophic level and in the use of basal resources. Different taxonomic groups of predators and decomposers are likely linked to different pools of organic matter in soil, suggesting different functional roles and indicating that trophic niches in soil animal communities are phylogenetically structured. During last two decades studies using stable isotope analysis have elucidated the trophic structure of soil communities, clarified basal food resources of the soil food web and revealed links between above- and belowground ecosystem compartments. Extending the use of stable isotope analysis to a wider range of soil-dwelling organisms, including microfauna, and a larger array of ecosystems provides the perspective of a comprehensive understanding of the structure and functioning of soil food webs.

16.
Mar Pollut Bull ; 126: 43-50, 2018 Jan.
Article in English | MEDLINE | ID: mdl-29421122

ABSTRACT

We analyzed stable isotope composition of carbon and nitrogen of suspended organic matter (seston) and tissues of macroalgae, macroinvertebrates and fish from the coastal area of the highly eutrophic Neva Estuary to test a hypothesis that organic carbon of macroalgae Cladophora glomerata and Ulva intestinalis produced during green tides may be among primary sources supporting coastal food webs. The Stable Isotope Bayesian mixing model (SIAR) showed that consumers poorly use organic carbon produced by macroalgae. According to the results of SIAR modeling, benthic macroinvertebrates and fish mostly rely on pelagic derived carbon as a basal resource for their production. Only some species of macroinvertebrates consumed macroalgae. Fish used this resource directly consuming zooplankton or indirectly via benthic macroinvertebrates. This was consistent with the results of the gut content analysis, which revealed a high proportion of zooplankton in the guts of non-predatory fish.


Subject(s)
Carbon/analysis , Chlorophyta , Food Chain , Seaweed , Animals , Baltic States , Bayes Theorem , Carbon Isotopes/analysis , Estuaries , Fishes , Invertebrates , Nitrogen Isotopes/analysis , Zooplankton
17.
Exp Appl Acarol ; 73(3-4): 383-384, 2017 12.
Article in English | MEDLINE | ID: mdl-29204791

ABSTRACT

Due to an unfortunate turn of events, the statistical results for TS1 (F- and p-values) in Table 4 were displayed in reversed order. The correct representation of Table 4 is published here and should be treated as definitive.

18.
Exp Appl Acarol ; 73(3-4): 365-381, 2017 Dec.
Article in English | MEDLINE | ID: mdl-29128984

ABSTRACT

We analysed species-level datasets representing Oribatida assemblages along a gradient of old-growth primary tropical forests, secondary forests, and plantation forests in Dong Nai Biosphere Reserve, Vietnam. We identified patterns in abundance, species richness and species assemblages of Oribatida, then applied taxonomic sufficiency approach to the datasets. Using three levels of higher-taxon aggregation, we evaluated whether aggregated datasets are useful in identifying ecological patterns, in comparison to species-level data. Species-level data on Oribatida assemblages clearly separated plantation forests from other forest environments; there was no significant separation between primary and secondary forests. Geographical structuring of species-level assemblages was significant, separating sites from two regions of the reserve. There was a significant concordance between multivariate ordination plots produced for species-level and aggregated (families, suborders/superfamilies) datasets, with Oribatida assemblages of plantation forests consistently separated from two other forest types. Mycobatidae (at family level) and Ceratozetoidea (at suborder/superfamily level) were indicators of plantation forests. The coarsest taxonomic resolution dataset with only four aggregated groups produced no separation of Oribatida assemblages by forest type or region. Moderate level of taxonomic aggregation applied to Oribatida community data did not cause great differences in patterns revealed by multivariate analysis, and therefore could be a valid approach to analysing the structure of tropical Oribatida assemblages. The taxonomic level of suborders and Brachypylina superfamilies appears to be the best compromise for ecological information and ease of identification. Two traits-body size and reproductive mode-were recorded for collected Oribatida species. Community-weighted mean trait value, modified Mason's index of functional divergence, and Rao's index of functional diversity were calculated for each trait in each of the sampled Oribatida assemblages. Sexual reproduction was a dominant reproductive mode in soil Oribatida and did not vary across forest types, indicating similar levels of resource limitation for this trait. For body size, lower functional divergence in plantation forests suggests less scope for niche differentiation and higher competition among different body sizes in this forest type. Use of functional traits can enhance and complement the analysis of Oribatida communities, but more data are needed on feeding- and diet-related traits in tropical Oribatida.


Subject(s)
Biodiversity , Forests , Mites/classification , Mites/physiology , Animals , Vietnam
19.
Pedobiologia (Jena) ; 63: 1-7, 2017 Jul.
Article in English | MEDLINE | ID: mdl-29129942

ABSTRACT

The ecological interactions that occur in and with soil are of consequence in many ecosystems on the planet. These interactions provide numerous essential ecosystem services, and the sustainable management of soils has attracted increasing scientific and public attention. Although soil ecology emerged as an independent field of research many decades ago, and we have gained important insights into the functioning of soils, there still are fundamental aspects that need to be better understood to ensure that the ecosystem services that soils provide are not lost and that soils can be used in a sustainable way. In this perspectives paper, we highlight some of the major knowledge gaps that should be prioritized in soil ecological research. These research priorities were compiled based on an online survey of 32 editors of Pedobiologia - Journal of Soil Ecology. These editors work at universities and research centers in Europe, North America, Asia, and Australia.The questions were categorized into four themes: (1) soil biodiversity and biogeography, (2) interactions and the functioning of ecosystems, (3) global change and soil management, and (4) new directions. The respondents identified priorities that may be achievable in the near future, as well as several that are currently achievable but remain open. While some of the identified barriers to progress were technological in nature, many respondents cited a need for substantial leadership and goodwill among members of the soil ecology research community, including the need for multi-institutional partnerships, and had substantial concerns regarding the loss of taxonomic expertise.

20.
Rapid Commun Mass Spectrom ; 29(16): 1465-72, 2015 Aug 30.
Article in English | MEDLINE | ID: mdl-26212161

ABSTRACT

RATIONALE: Data on the bulk stable isotope composition of soil bacteria and bacterivorous soil animals are required to estimate the nutrient and energy fluxes via bacterial channels within detrital food webs. We measured the isotopic composition of slime molds (Myxogastria, Amoebozoa), a group of soil protozoans forming macroscopic spore-bearing fruiting bodies. An analysis of largely bacterivorous slime molds can provide information on the bulk stable isotope composition of soil bacteria. METHODS: Fruiting bodies of slime molds were collected in a monsoon tropical forest of Cat Tien National Park, Vietnam, and analyzed by continuous-flow isotope ratio mass spectrometry. Prior to stable isotope analysis, carbonates were removed from a subset of samples by acidification. To estimate the trophic position of slime molds, their δ(13) C and δ(15) N values were compared with those of plant debris, soil, microbial destructors (litter-decomposing, humus-decomposing, and ectomycorrhizal fungi) and members of higher trophic levels (oribatid mites, termites, predatory macroinvertebrates). RESULTS: Eight species of slime molds represented by at least three independent samples were 3-6‰ enriched in (13) C and (15) N relative to plant litter. A small but significant difference in the δ(13) C and δ(15) N values suggests that different species of myxomycetes can differ in feeding behavior. The slime molds were enriched in (15) N compared with litter-decomposing fungi, and depleted in (15) N compared with mycorrhizal or humus-decomposing fungi. Slime mold sporocarps and plasmodia largely overlapped with oribatid mites in the isotopic bi-plot, but were depleted in (15) N compared with predatory invertebrates and humiphagous termites. CONCLUSIONS: A comparison with reference groups of soil organisms suggests strong trophic links of slime molds to saprotrophic microorganisms which decompose plant litter, but not to humus-decomposing microorganisms or to mycorrhizal fungi. Under the assumption that slime molds are primarily feeding on bacteria, the isotopic similarity of slime molds and mycophagous soil animals indicates that saprotrophic soil bacteria and fungi are similar in bulk isotopic composition.


Subject(s)
Carbon Isotopes/analysis , Food Chain , Myxomycetes/chemistry , Myxomycetes/physiology , Nitrogen Isotopes/analysis , Soil/parasitology , Bacteria , Biomass , Fruiting Bodies, Fungal/chemistry , Soil Microbiology
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