Your browser doesn't support javascript.
loading
Show: 20 | 50 | 100
Results 1 - 11 de 11
Filter
Add more filters










Publication year range
1.
Chembiochem ; 22(2): 364-373, 2021 01 15.
Article in English | MEDLINE | ID: mdl-32813312

ABSTRACT

Split inteins are indispensable tools for protein engineering because their ligation and cleavage reactions enable unique modifications of the polypeptide backbone. Three different classes of inteins have been identified according to the nature of the covalent intermediates resulting from the acyl rearrangements in the multistep protein-splicing pathway. Class 3 inteins employ a characteristic internal cysteine for a branched thioester intermediate. A bioinformatic database search of non-redundant protein sequences revealed the absence of split variants in 1701 class 3 inteins. We have discovered the first reported split class 3 intein in a metagenomics data set and report its biochemical, mechanistic and structural analysis. The AceL NrdHF intein exhibits low sequence conservation with other inteins and marked deviations in residues at conserved key positions, including a variation of the typical class-3 WCT triplet motif. Nevertheless, functional analysis confirmed the class 3 mechanism of the intein and revealed excellent splicing yields within a few minutes over a wide range of conditions and with barely detectable cleavage side reactions. A high-resolution crystal structure of the AceL NrdHF precursor and a mutagenesis study explained the importance and roles of several residues at the key positions. Tolerated substitutions in the flanking extein residues and a high affinity between the split intein fragments further underline the intein's future potential as a ligation tool.


Subject(s)
Proteins/chemistry , Computational Biology , Inteins , Models, Molecular , Protein Conformation , Protein Splicing
2.
Proc Natl Acad Sci U S A ; 116(44): 22164-22172, 2019 10 29.
Article in English | MEDLINE | ID: mdl-31611397

ABSTRACT

Split intein-mediated protein trans-splicing has found extensive applications in chemical biology, protein chemistry, and biotechnology. However, an enduring limitation of all well-established split inteins has been the requirement to carry out the reaction in a reducing environment due to the presence of 1 or 2 catalytic cysteines that need to be in a reduced state for splicing to occur. The concomitant exposure of the fused proteins to reducing agents severely limits the scope of protein trans-splicing by excluding proteins sensitive to reducing conditions, such as those containing critical disulfide bonds. Here we report the discovery, characterization, and engineering of a completely cysteine-less split intein (CL intein) that is capable of efficient trans-splicing at ambient temperatures, without a denaturation step, and in the absence of reducing agents. We demonstrate its utility for the site-specific chemical modification of nanobodies and an antibody Fc fragment by N- and C-terminal trans-splicing with short peptide tags (CysTag) that consist of only a few amino acids and have been prelabeled on a single cysteine using classical cysteine bioconjugation. We also synthesized the short N-terminal fragment of the atypically split CL intein by solid-phase peptide synthesis. Furthermore, using the CL intein in combination with a nanobody-epitope pair as a high-affinity mediator, we showed chemical labeling of the extracellular domain of a cell surface receptor on living mammalian cells with a short CysTag containing a synthetic fluorophore. The CL intein thus greatly expands the scope of applications for protein trans-splicing.


Subject(s)
Inteins/physiology , Protein Splicing , Amino Acid Sequence , Cysteine , Genetic Engineering , HeLa Cells , Humans , Oxidation-Reduction , Peptide Fragments/chemistry , Temperature
3.
AJNR Am J Neuroradiol ; 37(1): 11-8, 2016 Jan.
Article in English | MEDLINE | ID: mdl-26381555

ABSTRACT

BACKGROUND AND PURPOSE: With >473,000 annual emergency department visits for children with traumatic brain injuries in the United States, the risk of ionizing radiation exposure during CT examinations is a real concern. The purpose of this study was to assess the validity of rapid MR imaging to replace CT in the follow-up imaging of patients with head trauma. MATERIALS AND METHODS: A retrospective review of 103 pediatric patients who underwent initial head CT and subsequent follow-up rapid MR imaging between January 2010 and July 2013 was performed. Patients had minor head injuries (Glasgow Coma Scale, >13) that required imaging. Initial head CT was performed, with follow-up rapid MR imaging completed within 48 hours. A board-certified neuroradiologist, blinded to patient information and scan parameters, then independently interpreted the randomized cases. RESULTS: There was almost perfect agreement in the ability to detect extra-axial hemorrhage on rapid MR imaging and CT (κ = 0.84, P < .001). Evaluation of hemorrhagic contusion/intraparenchymal hemorrhage demonstrated a moderate level of agreement between MR imaging and CT (κ = 0.61, P < .001). The ability of MR imaging to detect a skull fracture also showed a substantial level of agreement with CT (κ = 0.71, P < .001). Detection of diffuse axonal injury demonstrated a slight level of agreement between MR imaging and CT (κ = 0.154, P = .04). However, the overall predictive agreement for the detection of an axonal injury was 91%. CONCLUSIONS: Rapid MR imaging is a valid technique for detecting traumatic cranial injuries and an adequate examination for follow-up imaging in lieu of repeat CT.


Subject(s)
Brain Injuries/diagnosis , Magnetic Resonance Imaging/methods , Adolescent , Child , Child, Preschool , Emergency Service, Hospital , Female , Humans , Infant , Male , Pediatrics/methods , Radiation Exposure/prevention & control , Retrospective Studies , Tomography, X-Ray Computed/methods
8.
9.
Clin Radiol ; 44(6): 437, 1991 Dec.
Article in English | MEDLINE | ID: mdl-1773574
10.
S Afr J Surg ; 29(3): 114-5, 1991 Sep.
Article in English | MEDLINE | ID: mdl-1925807

ABSTRACT

An unusual case of a patient with a phaeochromocytoma presenting with colitis is reported. A review of published reports showed a high mortality rate in patients with phaeochromocytoma complicated by intestinal disease. The importance of pre-operative preparation with alpha-adrenergic blockers and removal of the tumour for the disappearance of intestinal symptoms is emphasised.


Subject(s)
Adrenal Gland Neoplasms/complications , Colitis/complications , Pheochromocytoma/complications , Adult , Humans , Male
11.
S Afr J Surg ; 27(5): 189-91, 1989 Dec.
Article in English | MEDLINE | ID: mdl-2609237

ABSTRACT

A case of a 23-year-old man who sustained a traumatic cricotracheal separation after a closed neck injury is reported. Hyoid bone elevation above the level of the superior surface of the body of the third cervical vertebra was present on lateral cervical radiography. The importance of the recognition of this sign is discussed.


Subject(s)
Cricoid Cartilage/injuries , Hyoid Bone/diagnostic imaging , Laryngeal Cartilages/injuries , Trachea/injuries , Wounds, Nonpenetrating/diagnostic imaging , Adult , Cervical Vertebrae/diagnostic imaging , Humans , Male , Radiography , Suicide, Attempted
SELECTION OF CITATIONS
SEARCH DETAIL
...