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1.
Mycologia ; 105(5): 1110-25, 2013.
Article in English | MEDLINE | ID: mdl-22962355

ABSTRACT

We analyzed the DNA sequences of four gene regions, 28S and 18S rDNA, the ITS region and rpb2, to obtain a high resolution phylogenetic tree of Dacrymycetes. In addition, we comparatively studied micro- and macromorphological characteristics of representative species. The traditional generic classification based on morphological characteristics was not reflected by our molecular phylogenies. Ancestral state reconstructions indicated that the morphology of basidia and clamp connections are evolutionarily stable. In contrast, basidiocarps and basidiospore septation patterns appear variable. Dacrymyces unisporus shares the dolipores with non-perforate parenthesomes typical of other dacrymycetous taxa but is a unique species having predominantly non-bifurcate basidia and subglobose to ovoid basidiospores with transverse and longitudinal septa. In molecular phylogenies this species is a member of Dacrymycetes but always occupies a sister position in relation to the rest of the Dacrymycetes. Based on our results we propose a new genus, Unilacryma, for D. unisporus. For proper accommodation of this taxon, we introduce the family Unilacrymaceae and the order Unilacrymales.


Subject(s)
Basidiomycota/classification , DNA, Fungal/chemistry , Phylogeny , Base Sequence , Basidiomycota/genetics , Basidiomycota/physiology , Basidiomycota/ultrastructure , Biological Evolution , DNA, Fungal/genetics , DNA, Ribosomal/chemistry , DNA, Ribosomal/genetics , DNA, Ribosomal Spacer/genetics , Fruiting Bodies, Fungal , Molecular Sequence Data , RNA, Ribosomal, 18S/genetics , RNA, Ribosomal, 28S/genetics , Sequence Alignment , Sequence Analysis, DNA , Spores, Fungal
2.
Mycologia ; 97(6): 1238-50, 2005.
Article in English | MEDLINE | ID: mdl-16722217

ABSTRACT

We investigated intraspecific diversity and genetic structures of a saprotrophic fungus--Thysanophora penicillioides--based on sequences of nuclear ribosomal internal transcribed spacer (ITS) in 15 discontinuous Abies mariesii forests of Japan. In such a well-defined morphological species, numerous unexpected ITS variations were revealed: 12 ITS sequence types detected in 254 isolates collected from 15 local populations were classified into five ITS sequence groups. Maximally, four ITS groups consisted of seven ITS types coexisting in one population. However, group 1 was dominant with approximately 65%; in particular, one haplotype, 1a, was most dominant with approximately 60% in respective populations. Therefore, few differences were recognized in genetic structure among local populations, implying that the gene flow of each lineage of the fungus occurs among local populations without geographic limitations. However, minor haplotypes in some ITS groups were found only in restricted areas, suggesting that they might expand steadily from their places of origin to neighboring A. mariesii forests. Aggregating sequence data of seven European strains and four North American strains from various substrates to those of Japanese strains, 18 ITS sequence types and 28 variable sites were recognized. They were clustered into nine lineages by phylogenetic analyses of the beta-tubulin and combined ITS and beta-tubulin datasets. According to phylogenetic species recognition by the concordance of genealogies, respective lineages correspond to phylogenetic species. Plural phylogenetic species coexist in a local population in an A. mariesii forest in Japan.


Subject(s)
Abies/microbiology , Mitosporic Fungi/genetics , Base Sequence , DNA, Fungal/chemistry , DNA, Fungal/genetics , DNA, Ribosomal Spacer/chemistry , DNA, Ribosomal Spacer/genetics , Genetic Variation , Haplotypes , Japan , Mitosporic Fungi/classification , Molecular Sequence Data , Phylogeny , Polymerase Chain Reaction , Sequence Alignment , Sequence Analysis, DNA , Tubulin/chemistry , Tubulin/genetics
3.
Mycol Res ; 108(Pt 10): 1143-52, 2004 Oct.
Article in English | MEDLINE | ID: mdl-15535065

ABSTRACT

Mycoëmilia scoparia gen. sp. nov. is described as a new member of Kickxellales. It is characterized by lageniform sporocladia produced acrogenously in mass and bears wet and fusiform spores on the sporocladia. Ramicandelaber brevisporus sp. nov. is distinguished from the type species of the genus, R. longisporus, by producing much shorter asexual spores, (3-)8(-13) long fertile branches arising from a globose body, and lateral branches.


Subject(s)
Fungi/isolation & purification , Soil Microbiology , Fungi/ultrastructure , Microscopy, Electron , Spores, Fungal/ultrastructure
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