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1.
PLoS Pathog ; 20(2): e1011840, 2024 Feb.
Article in English | MEDLINE | ID: mdl-38315735

ABSTRACT

Human metapneumovirus (HMPV) is an important cause of acute lower respiratory infection in children and adults worldwide. There are four genetic subgroups of HMPV and both neutralizing antibodies and T cells contribute to protection. However, little is known about mechanisms of pathogenesis and most published work is based on a few extensively passaged, laboratory-adapted strains of HMPV. In this study, we isolated and characterized a panel of low passage HMPV clinical isolates representing all four genetic subgroups. The clinical isolates exhibited lower levels of in vitro replication compared to a lab-adapted strain. We compared disease phenotypes using a well-established mouse model. Several virulent isolates caused severe weight loss, lung pathology, airway dysfunction, and fatal disease in mice, which was confirmed in three inbred mouse strains. Disease severity did not correlate with lung viral titer, as virulent strains exhibited restricted replication in the lower airway. Virulent HMPV isolates were associated with markedly increased proinflammatory cytokine production and neutrophil influx; however, depletion of neutrophils or genetic ablation of inflammasome components did not reverse disease. Virulent clinical isolates induced markedly increased type I and type III interferon (IFN) secretion in vitro and in vivo. STAT1/2-deficient mice lacking both type I and type III IFN signaling showed reduced disease severity and increased lung viral replication. Inhibition of type I IFN signaling using a blocking antibody or genetic ablation of the type I IFN receptor reduced pathology with minimal effect on viral replication. Conversely, blockade of type III IFN signaling with a neutralizing antibody or genetic ablation of the IFN-lambda receptor had no effect on pathogenesis but restored viral replication. Collectively, these results demonstrate distinct roles for type I and type III IFN in HMPV pathogenesis and immunity.


Subject(s)
Metapneumovirus , Paramyxoviridae Infections , Respiratory Tract Infections , Child , Animals , Mice , Humans , Interferon Lambda , Lung , Respiratory Tract Infections/pathology , Interferons
2.
Antivir Chem Chemother ; 27: 2040206619830197, 2019.
Article in English | MEDLINE | ID: mdl-30759993

ABSTRACT

Human metapneumovirus, a paramyxovirus discovered in 2001, is a major cause of lower respiratory infection in adults and children worldwide. There are no licensed vaccines or drugs for human metapneumovirus. We developed a fluorescent, cell-based medium-throughput screening assay for human metapneumovirus that captures inhibitors of all stages of the viral lifecycle except budding of progeny virus particles from the cell membrane. We optimized and validated the assay and performed a successful medium-throughput screening. A number of hits were identified, several of which were confirmed to inhibit viral replication in secondary assays. This assay offers potential to discover new antivirals for human metapneumovirus and related respiratory viruses. Compounds discovered using the medium-throughput screening may also provide useful probes of viral biology.


Subject(s)
Antiviral Agents/pharmacology , Drug Discovery , Drug Evaluation, Preclinical/methods , Metapneumovirus/drug effects , Animals , Antiviral Agents/isolation & purification , Cell Line , Humans , Metapneumovirus/pathogenicity , Metapneumovirus/physiology , Microbial Sensitivity Tests , Respiratory Tract Infections/microbiology , Serial Passage , Virus Replication/drug effects
3.
J Immunol ; 197(1): 233-43, 2016 07 01.
Article in English | MEDLINE | ID: mdl-27259857

ABSTRACT

Viruses are frequent causes of lower respiratory infection (LRI). Programmed cell death-1 (PD-1) signaling contributes to pulmonary CD8(+) T cell (TCD8) functional impairment during acute viral LRI, but the role of TCD8 impairment in viral clearance and immunopathology is unclear. We now find that human metapneumovirus infection induces virus-specific lung TCD8 that fail to produce effector cytokines or degranulate late postinfection, with minimally increased function even in the absence of PD-1 signaling. Impaired lung TCD8 upregulated multiple inhibitory receptors, including PD-1, lymphocyte activation gene 3 (LAG-3), T cell Ig mucin 3, and 2B4. Moreover, coexpression of these receptors continued to increase even after viral clearance, with most virus-specific lung TCD8 expressing three or more inhibitory receptors on day 14 postinfection. Viral infection also increased expression of inhibitory ligands by both airway epithelial cells and APCs, further establishing an inhibitory environment. In vitro Ab blockade revealed that multiple inhibitory receptors contribute to TCD8 impairment induced by either human metapneumovirus or influenza virus infection. In vivo blockade of T cell Ig mucin 3 signaling failed to enhance TCD8 function or reduce viral titers. However, blockade of LAG-3 in PD-1-deficient mice restored TCD8 effector functions but increased lung pathology, indicating that LAG-3 mediates lung TCD8 impairment in vivo and contributes to protection from immunopathology during viral clearance. These results demonstrate that an orchestrated network of pathways modifies lung TCD8 functionality during viral LRI, with PD-1 and LAG-3 serving prominent roles. Lung TCD8 impairment may prevent immunopathology but also contributes to recurrent lung infections.


Subject(s)
CD8-Positive T-Lymphocytes/immunology , Influenza A Virus, H1N1 Subtype/immunology , Lung/immunology , Metapneumovirus/immunology , Orthomyxoviridae Infections/immunology , Paramyxoviridae Infections/immunology , Respiratory Tract Infections/immunology , Animals , Antigens, CD/metabolism , CD8-Positive T-Lymphocytes/virology , Cells, Cultured , Lung/virology , Mice , Mice, Inbred C57BL , Mice, Knockout , Mice, Transgenic , Mucin-3/metabolism , Programmed Cell Death 1 Receptor/genetics , Respiratory Tract Infections/virology , Signal Transduction , Signaling Lymphocytic Activation Molecule Family/metabolism , Lymphocyte Activation Gene 3 Protein
4.
Vaccine ; 34(7): 950-6, 2016 Feb 10.
Article in English | MEDLINE | ID: mdl-26772634

ABSTRACT

Human respiratory syncytial virus (hRSV) and human metapneumovirus (hMPV) are major causes of illness among children, the elderly, and the immunocompromised. No vaccine has been licensed for protection against either of these viruses. We tested the ability of two Venezuelan equine encephalitis virus-based viral replicon particle (VEE-VRP) vaccines that express the hRSV or hMPV fusion (F) protein to confer protection against hRSV or hMPV in African green monkeys. Animals immunized with VEE-VRP vaccines developed RSV or MPV F-specific antibodies and serum neutralizing activity. Compared to control animals, immunized animals were better able to control viral load in the respiratory mucosa following challenge and had lower levels of viral genome in nasopharyngeal and bronchoalveolar lavage fluids. The high level of immunogenicity and protective efficacy induced by these vaccine candidates in nonhuman primates suggest that they hold promise for further development.


Subject(s)
Paramyxoviridae Infections/prevention & control , Replicon , Respiratory Syncytial Virus Infections/prevention & control , Viral Vaccines/immunology , Alphavirus , Animals , Antibodies, Neutralizing/blood , Antibodies, Viral/blood , Bronchoalveolar Lavage Fluid/virology , Chlorocebus aethiops , Encephalitis Virus, Venezuelan Equine , Immunoglobulin G/blood , Metapneumovirus , Neutralization Tests , Nose/virology , Respiratory Syncytial Virus, Human , Viral Fusion Proteins/immunology
5.
J Virol ; 89(8): 4405-20, 2015 Apr.
Article in English | MEDLINE | ID: mdl-25653440

ABSTRACT

UNLABELLED: Type I IFN signaling, which is initiated through activation of the alpha interferon receptor (IFNAR), regulates the expression of proteins that are crucial contributors to immune responses. Paramyxoviruses, including human metapneumovirus (HMPV), have evolved mechanisms to inhibit IFNAR signaling, but the specific contribution of IFNAR signaling to the control of HMPV replication, pathogenesis, and adaptive immunity is unknown. We used IFNAR-deficient (IFNAR(-/-)) mice to assess the effect of IFNAR signaling on HMPV replication and the CD8(+) T cell response. HMPV-infected IFNAR(-/-) mice had a higher peak of early viral replication but cleared the virus with kinetics similar to those of wild-type (WT) mice. However, IFNAR(-/-) mice infected with HMPV displayed less airway dysfunction and lung inflammation. CD8(+) T cells of IFNAR(-/-) mice after HMPV infection expressed levels of the inhibitory receptor programmed death 1 (PD-1) similar to those of WT mice. However, despite lower expression of inhibitory programmed death ligand 1 (PD-L1), HMPV-specific CD8(+) T cells of IFNAR(-/-) mice were more functionally impaired than those of WT mice and upregulated the inhibitory receptor Tim-3. Analysis of the antigen-presenting cell subsets in the lungs revealed that the expansion of PD-L1(low) dendritic cells (DCs), but not PD-L1(high) alveolar macrophages, was dependent on IFNAR signaling. Collectively, our results indicate a role for IFNAR signaling in the early control of HMPV replication, disease progression, and the development of an optimal adaptive immune response. Moreover, our findings suggest an IFNAR-independent mechanism of lung CD8(+) T cell impairment. IMPORTANCE: Human metapneumovirus (HMPV) is a leading cause of acute respiratory illness. CD8(+) T cells are critical for clearing viral infection, yet recent evidence shows that HMPV and other respiratory viruses induce CD8(+) T cell impairment via PD-1-PD-L1 signaling. We sought to understand the role of type I interferon (IFN) in the innate and adaptive immune responses to HMPV by using a mouse model lacking IFN signaling. Although HMPV titers were higher in the absence of type I IFN, virus was nonetheless cleared and mice were less ill, indicating that type I IFN is not required to resolve HMPV infection but contributes to pathogenesis. Further, despite lower levels of the inhibitory ligand PD-L1 in mice lacking type I IFN, CD8(+) T cells were more impaired in these mice than in WT mice. Our data suggest that specific antigen-presenting cell subsets and the inhibitory receptor Tim-3 may contribute to CD8(+) T cell impairment.


Subject(s)
Gene Expression Regulation/immunology , Interferon Type I/metabolism , Metapneumovirus/immunology , Paramyxoviridae Infections/immunology , Signal Transduction/immunology , Virus Replication/physiology , Analysis of Variance , Animals , Antigen-Presenting Cells/immunology , CD8-Positive T-Lymphocytes/immunology , CD8-Positive T-Lymphocytes/metabolism , Flow Cytometry , Hepatitis A Virus Cellular Receptor 2 , Humans , Interferon Type I/genetics , Metapneumovirus/pathogenicity , Mice , Mice, Inbred C57BL , Mice, Knockout , Oximetry , Paramyxoviridae Infections/pathology , Real-Time Polymerase Chain Reaction , Receptors, Virus/metabolism , Reverse Transcriptase Polymerase Chain Reaction
6.
J Immunol ; 193(10): 5108-17, 2014 Nov 15.
Article in English | MEDLINE | ID: mdl-25339663

ABSTRACT

Reinfections with respiratory viruses are common and cause significant clinical illness, yet precise mechanisms governing this susceptibility are ill defined. Lung Ag-specific CD8(+) T cells (T(CD8)) are impaired during acute viral lower respiratory infection by the inhibitory receptor programmed death-1 (PD-1). To determine whether PD-1 contributes to recurrent infection, we first established a model of reinfection by challenging B cell-deficient mice with human metapneumovirus (HMPV) several weeks after primary infection, and found that HMPV replicated to high titers in the lungs. A robust secondary effector lung TCD8 response was generated during reinfection, but these cells were more impaired and more highly expressed the inhibitory receptors PD-1, LAG-3, and 2B4 than primary T(CD8). In vitro blockade demonstrated that PD-1 was the dominant inhibitory receptor early after reinfection. In vivo therapeutic PD-1 blockade during HMPV reinfection restored lung T(CD8) effector functions (i.e., degranulation and cytokine production) and enhanced viral clearance. PD-1 also limited the protective efficacy of HMPV epitope-specific peptide vaccination and impaired lung T(CD8) during heterotypic influenza virus challenge infection. Our results indicate that PD-1 signaling may contribute to respiratory virus reinfection and evasion of vaccine-elicited immune responses. These results have important implications for the design of effective vaccines against respiratory viruses.


Subject(s)
CD8-Positive T-Lymphocytes/immunology , Orthomyxoviridae Infections/immunology , Paramyxoviridae Infections/immunology , Programmed Cell Death 1 Receptor/immunology , Respiratory Tract Infections/immunology , Animals , Antigens, CD/genetics , Antigens, CD/immunology , B-Lymphocytes/immunology , B-Lymphocytes/pathology , CD8-Positive T-Lymphocytes/pathology , CD8-Positive T-Lymphocytes/virology , Cell Degranulation/immunology , Gene Expression Regulation , Humans , Immune Evasion , Lung/immunology , Lung/pathology , Lung/virology , Lymphocyte Count , Metapneumovirus/immunology , Mice , Orthomyxoviridae/immunology , Orthomyxoviridae Infections/genetics , Orthomyxoviridae Infections/pathology , Orthomyxoviridae Infections/virology , Paramyxoviridae Infections/genetics , Paramyxoviridae Infections/prevention & control , Paramyxoviridae Infections/virology , Programmed Cell Death 1 Receptor/genetics , Receptors, Immunologic/genetics , Receptors, Immunologic/immunology , Respiratory Tract Infections/genetics , Respiratory Tract Infections/pathology , Respiratory Tract Infections/virology , Signal Transduction , Signaling Lymphocytic Activation Molecule Family , Viral Load , Viral Vaccines/administration & dosage , Viral Vaccines/immunology , Virus Replication , Lymphocyte Activation Gene 3 Protein
7.
J Virol ; 88(18): 10963-9, 2014 Sep.
Article in English | MEDLINE | ID: mdl-24965465

ABSTRACT

Human metapneumovirus (HMPV) is a major cause of respiratory disease. The role of NK cells in protection against HMPV is unclear. We show that while HMPV-infected C57BL/6 mice had higher numbers of functional lung NK cells than mock-treated mice, comparing NK cell-depleted and control mice did not reveal differences in lung viral titers, histopathology, cytokine levels, or T cell numbers or function. These data indicate that NK cells are not required for host control of HMPV.


Subject(s)
Killer Cells, Natural/immunology , Metapneumovirus/physiology , Paramyxoviridae Infections/immunology , Animals , Cytokines/immunology , Humans , Lung/immunology , Lung/virology , Metapneumovirus/immunology , Mice , Mice, Inbred C57BL , Paramyxoviridae Infections/virology , T-Lymphocytes/immunology
8.
J Virol ; 88(11): 6368-79, 2014 Jun.
Article in English | MEDLINE | ID: mdl-24672031

ABSTRACT

UNLABELLED: Human metapneumovirus (HMPV) is a leading cause of respiratory disease in infants, children, and the elderly worldwide, yet no licensed vaccines exist. Live-attenuated vaccines present safety challenges, and protein subunit vaccines induce primarily antibody responses. Virus-like particles (VLPs) are an attractive alternative vaccine approach because of reduced safety concerns compared with live vaccines. We generated HMPV VLPs by expressing viral proteins in suspension-adapted human embryonic kidney epithelial (293-F) cells and found that the viral matrix (M) and fusion (F) proteins were sufficient to form VLPs. We previously reported that the VLPs resemble virus morphology and incorporate fusion-competent F protein (R. G. Cox, S. B. Livesay, M. Johnson, M. D. Ohi, and J. V. Williams, J. Virol. 86:12148-12160, 2012), which we hypothesized would elicit F-specific antibody and T cell responses. In this study, we tested whether VLP immunization could induce protective immunity to HMPV by using a mouse model. C57BL/6 mice were injected twice intraperitoneally with VLPs alone or with adjuvant and subsequently challenged with HMPV. Mice were euthanized 5 days postinfection, and virus titers, levels of neutralizing antibodies, and numbers of CD3(+) T cells were quantified. Mice immunized with VLPs mounted an F-specific antibody response and generated CD8(+) T cells recognizing an F protein-derived epitope. VLP immunization induced a neutralizing-antibody response that was enhanced by the addition of either TiterMax Gold or α-galactosylceramide adjuvant, though adjuvant reduced cellular immune responses. Two doses of VLPs conferred complete protection from HMPV replication in the lungs of mice and were not associated with a Th2-skewed cytokine response. These results suggest that nonreplicating VLPs are a promising vaccine candidate for HMPV. IMPORTANCE: Human metapneumovirus (HMPV) is a leading cause of acute respiratory infection in infants, children, and the elderly worldwide, yet no licensed vaccines exist. Live-attenuated vaccines present safety challenges, and protein subunit vaccines induce primarily antibody responses. Virus-like particles (VLPs) are an attractive alternative vaccine approach. We generated HMPV VLPs by expressing the viral matrix (M) and fusion (F) proteins in mammalian cells. We found that mice immunized with VLPs mounted an F-specific antibody response and generated CD8(+) T cells recognizing an F protein-derived epitope. VLP immunization induced a neutralizing-antibody response that was enhanced by the addition of either TiterMax Gold or α-galactosylceramide adjuvant. Two doses of VLPs conferred complete protection against HMPV replication in the lungs of mice and were not associated with a Th2-skewed cytokine response. These results suggest that nonreplicating VLPs are a promising vaccine candidate for HMPV.


Subject(s)
Antibodies, Neutralizing/immunology , B-Lymphocytes/immunology , CD8-Positive T-Lymphocytes/immunology , Immunity, Cellular/immunology , Metapneumovirus/immunology , Vaccines, Virus-Like Particle/immunology , Analysis of Variance , Animals , Blotting, Western , Enzyme-Linked Immunosorbent Assay , Enzyme-Linked Immunospot Assay , Flow Cytometry , Galactosylceramides , HEK293 Cells , Humans , Immunohistochemistry , Lung/immunology , Lung/pathology , Mice , Mice, Inbred C57BL , Microscopy, Electron, Transmission , Poloxalene , Real-Time Polymerase Chain Reaction , Reverse Transcriptase Polymerase Chain Reaction , Vaccines, Virus-Like Particle/ultrastructure
9.
Clin Vaccine Immunol ; 20(10): 1654-6, 2013 Oct.
Article in English | MEDLINE | ID: mdl-23945161

ABSTRACT

We compared antibodies against human metapneumovirus (HMPV) and respiratory syncytial virus (RSV) in children. The antibody nadirs for both viruses were at 3 to 5 months, and the majority of children were seropositive for both by 2 years. There was no significant difference in the kinetics of maternal antibody decline or seroconversion relative to the two viruses.


Subject(s)
Antibodies, Viral/blood , Antigens, Viral , Metapneumovirus/immunology , Paramyxoviridae Infections/epidemiology , Respiratory Syncytial Virus Infections/epidemiology , Respiratory Syncytial Virus, Human/immunology , Age Factors , Antigens, Viral/genetics , Child , Child, Preschool , Enzyme-Linked Immunosorbent Assay/methods , Female , Humans , Infant , Infant, Newborn , Male , Paramyxoviridae Infections/immunology , Recombinant Fusion Proteins/genetics , Respiratory Syncytial Virus Infections/immunology , Seroepidemiologic Studies
10.
Arch Virol ; 158(6): 1245-52, 2013 Jun.
Article in English | MEDLINE | ID: mdl-23385328

ABSTRACT

Human metapneumovirus (HMPV) is an important cause of acute respiratory illnesses in children. HMPV encodes two major surface glycoproteins, fusion (F) and glycoprotein (G). The function of G has not been fully established, though it is dispensable for in vitro and in vivo replication. We analyzed 87 full-length HMPV G sequences from isolates collected over 20 years. The G sequences fell into four subgroups with a mean 63 % amino acid identity (minimum 29 %). The length of G varied from 217 to 241 residues. Structural features such as proline content and N- and O-glycosylation sites were present in all strains but quite variable between subgroups. There was minimal drift within the subgroups over 20 years. The estimated time to the most recent common ancestor was 215 years. HMPV G was conserved within lineages over 20 years, suggesting functional constraints on diversity. However, G was poorly conserved between subgroups, pointing to potentially distinct roles for G among different viral lineages.


Subject(s)
Conserved Sequence/genetics , Glycoproteins/genetics , Metapneumovirus/genetics , Viral Proteins/genetics , Amino Acid Sequence , Base Sequence , Child, Preschool , Conserved Sequence/physiology , Genetic Variation/genetics , Glycoproteins/physiology , Humans , Metapneumovirus/physiology , Paramyxoviridae Infections/virology , Phylogeny , Real-Time Polymerase Chain Reaction , Sequence Alignment , Viral Proteins/physiology
11.
J Clin Invest ; 122(8): 2967-82, 2012 Aug.
Article in English | MEDLINE | ID: mdl-22797302

ABSTRACT

Viruses are leading causes of severe acute lower respiratory infections (LRIs). These infections evoke incomplete immunity, as individuals can be repeatedly reinfected throughout life. We report that acute viral LRI causes rapid pulmonary CD8+ cytotoxic T lymphocyte (TCD8) functional impairment via programmed death-1/programmed death ligand-1 (PD-1/PD-L1) signaling, a pathway previously associated with prolonged antigenic stimulation during chronic infections and cancer. PD-1-mediated TCD8 impairment occurred acutely in mice following infection with human metapneumovirus or influenza virus. Viral antigen was sufficient for PD-1 upregulation, but induction of PD-L1 was required for impairment. During secondary viral infection or epitope-only challenge, memory TCD8 rapidly reexpressed PD-1 and exhibited severe functional impairment. Inhibition of PD-1 signaling using monoclonal antibody blockade prevented TCD8 impairment, reduced viral titers during primary infection, and enhanced protection of immunized mice against challenge infection. Additionally, PD-1 and PD-L1 were upregulated in the lungs of patients with 2009 H1N1 influenza virus, respiratory syncytial virus, or parainfluenza virus infection. These results indicate that PD-1 mediates TCD8 functional impairment during acute viral infection and may contribute to recurrent viral LRIs. Therefore, the PD-1/PD-L1 pathway may represent a therapeutic target in the treatment of respiratory viruses.


Subject(s)
CD8-Positive T-Lymphocytes/immunology , Programmed Cell Death 1 Receptor/metabolism , Respiratory Tract Infections/immunology , Respiratory Tract Infections/metabolism , Virus Diseases/immunology , Virus Diseases/metabolism , Acute Disease , Animals , Antigens, Viral , HLA-B7 Antigen/genetics , Humans , Imidazoles , Immunologic Memory , Influenza A Virus, H1N1 Subtype , Influenza, Human/immunology , Influenza, Human/metabolism , Lung/immunology , Lung/metabolism , Metapneumovirus , Mice , Mice, Transgenic , Paramyxoviridae Infections/immunology , Paramyxoviridae Infections/metabolism , Programmed Cell Death 1 Receptor/antagonists & inhibitors , Pyridines , Respiratory Syncytial Virus Infections/immunology , Respiratory Syncytial Virus Infections/metabolism , Respiratory Syncytial Virus, Human , Signal Transduction , Up-Regulation
12.
J Clin Virol ; 54(4): 371-5, 2012 Aug.
Article in English | MEDLINE | ID: mdl-22677006

ABSTRACT

BACKGROUND: Human metapneumovirus (HMPV) is a paramyxovirus with multiple genetic lineages that is a leading cause of acute respiratory disease. Several RT-PCR assays have been described based on limited available sequence data. OBJECTIVES: To develop a broadly reactive real-time RT-PCR assay for HMPV that allows for a rapid, sensitive, and specific detection in a clinical or research setting. STUDY DESIGN: Three published assays for HMPV were modified based on analysis of multiple HMPV sequences obtained from GenBank. Original and modified assays were tested against prototype HMPV strains from each genetic sublineage, multiple isolates of HMPV from different years, a collection of clinical specimens, and commercial validation panels. RESULTS: A number of potential sequence mismatches with diverse HMPV strains were identified. Modifications were made to oligonucleotides to improve annealing efficiency. Primers and probes based on newer sequence data offered enhanced detection of all subgroups, especially for low titer specimens. The new primers and probe detected multiple clinical isolates of HMPV collected over a twenty-year period. The modified assay improved detection of HMPV in a panel of clinical specimens, and correctly identified HMPV samples in two commercial validation sets. CONCLUSIONS: We report a modified real-time RT-PCR assay for HMPV that detects all genetic lineages with high sensitivity.


Subject(s)
Metapneumovirus/isolation & purification , Paramyxoviridae Infections/diagnosis , Reverse Transcriptase Polymerase Chain Reaction/methods , DNA Primers , Humans , Metapneumovirus/classification , Metapneumovirus/genetics , Paramyxoviridae Infections/virology , RNA, Viral/analysis , RNA, Viral/genetics , RNA, Viral/isolation & purification , Respiratory Tract Infections/diagnosis , Respiratory Tract Infections/virology , Sensitivity and Specificity
13.
Virus Res ; 160(1-2): 200-5, 2011 Sep.
Article in English | MEDLINE | ID: mdl-21740936

ABSTRACT

Human metapneumovirus (HMPV) is an important cause of acute respiratory illness in children. We determined the complete genome sequence of four strains of HMPV representing each of the four lineages. These sequences were compared with published HMPV genome sequences. Most genes were conserved between the genetic lineages (79.5-99.6%), though nucleotide diversity was greater than amino acid diversity, suggesting functional constraints on mutation. However, the SH and G open reading frames were more variable (mean 76.4% and 59.0% aa identity, respectively), with mostly nonsynonymous changes, suggesting selective pressure on the SH and G proteins. Gene-start regions were largely conserved between genes and viruses, while gene-end sequences were conserved between viruses but not between genes. The SH-G and G-L intergenic regions were extremely long (∼200 nt) and have no defined function, yet were highly conserved within major groups. These findings highlight broadly conserved regions of the HMPV genome and suggest unidentified biological roles for SH and G.


Subject(s)
Genome, Viral , Metapneumovirus/genetics , Sequence Analysis, DNA , Child , Child, Preschool , Conserved Sequence , Humans , Molecular Sequence Data , Mutation , Polymorphism, Genetic , RNA, Viral/genetics , Viral Proteins/genetics
14.
Vaccine ; 28(25): 4145-52, 2010 Jun 07.
Article in English | MEDLINE | ID: mdl-20417260

ABSTRACT

Human metapneumovirus (HMPV) expresses the major surface glycoproteins F and G. We evaluated the protective efficacy of immunization with G. We generated a recombinant form of G ectodomain (GDeltaTM) that was secreted from mammalian cells and purified by affinity chromatography. We tested the immunogenicity of GDeltaTM in cotton rats. Animals were immunized with PBS, GDeltaTM alone or adjuvanted, or were infected once with HMPV, and challenged with live HMPV at 28 days. Animals vaccinated with adjuvanted and non-adjuvanted GDeltaTM developed high levels of serum antibodies to both recombinant and native G protein; however, vaccinated animals did not develop neutralizing antibodies and were not protected against virus challenge. Unlike the analogous non-fusion glycoproteins of other human paramyxoviruses, HMPV G does not appear to be a protective antigen. This represents an unusual feature of HMPV.


Subject(s)
Glycoproteins/immunology , Metapneumovirus/immunology , Paramyxoviridae Infections/immunology , Viral Proteins/immunology , Animals , Antibodies, Neutralizing/blood , Antibodies, Viral/blood , Cytokines/immunology , Glycosylation , Guinea Pigs , Lung/pathology , Lung/virology , Paramyxoviridae Infections/prevention & control , Rats , Recombinant Proteins/immunology , Vaccination
15.
Virus Res ; 151(1): 54-9, 2010 Jul.
Article in English | MEDLINE | ID: mdl-20380856

ABSTRACT

Human metapneumovirus (HMPV) is a paramyxovirus that is a leading cause of acute respiratory disease. HMPV is difficult to cultivate and limited published data describe the in vitro growth characteristics of the virus and its ability to replicate in different cell lines. Stability of HMPV to different temperatures or environmental conditions has not been described. Nosocomial infections due to HMPV have been reported, and thus the survival of infectious particles on environmental surfaces is important. We tested multiple cell lines for the ability to support HMPV replication both in the presence and absence of exogenous trypsin. The most permissive monkey kidney epithelial cells were LLC-MK2 and Vero, while the most permissive human airway epithelial cell line was BEAS-2B. LLC-MK2 cells were tolerant of trypsin and thus remain an ideal cell line for HMPV cultivation. Spinoculation significantly increased the infectivity of HMPV for cells in monolayer culture. Infectious virus was very stable to repeat freeze-thaw cycles, ambient room temperature, or 4 degrees C, while incubation at 37 degrees C led to degradation of virus titer. Finally, nonporous materials such as metal or plastic retained infectious virus for prolonged periods, while virus deposited on tissue and fabric rapidly lost infectivity. These findings provide guidance for laboratories attempting to culture HMPV and relevant information for infection control policies.


Subject(s)
Metapneumovirus/growth & development , Animals , Cell Line , Culture Techniques , Environment , Humans , Metapneumovirus/isolation & purification , Microbial Viability , Temperature , Trypsin/metabolism , Virus Attachment , Virus Replication
16.
Virol J ; 6: 138, 2009 Sep 09.
Article in English | MEDLINE | ID: mdl-19740442

ABSTRACT

BACKGROUND: Human metapneumovirus (HMPV) is an important cause of acute respiratory illness in children. We examined the diversity and molecular evolution of HMPV using 85 full-length F (fusion) gene sequences collected over a 20-year period. RESULTS: The F gene sequences fell into two major groups, each with two subgroups, which exhibited a mean of 96% identity by predicted amino acid sequences. Amino acid identity within and between subgroups was higher than nucleotide identity, suggesting structural or functional constraints on F protein diversity. There was minimal progressive drift over time, and the genetic lineages were stable over the 20-year period. Several canonical amino acid differences discriminated between major subgroups, and polymorphic variations tended to cluster in discrete regions. The estimated rate of mutation was 7.12 x 10(-4) substitutions/site/year and the estimated time to most recent common HMPV ancestor was 97 years (95% likelihood range 66-194 years). Analysis suggested that HMPV diverged from avian metapneumovirus type C (AMPV-C) 269 years ago (95% likelihood range 106-382 years). CONCLUSION: HMPV F protein remains conserved over decades. HMPV appears to have diverged from AMPV-C fairly recently.


Subject(s)
Evolution, Molecular , Genetic Variation , Metapneumovirus/genetics , Viral Fusion Proteins/genetics , Humans , Metapneumovirus/chemistry , Metapneumovirus/classification , Molecular Sequence Data , Phylogeny , Viral Fusion Proteins/chemistry
17.
Pediatr Infect Dis J ; 28(8): 682-7, 2009 Aug.
Article in English | MEDLINE | ID: mdl-19633513

ABSTRACT

BACKGROUND: The epidemiology of human coronaviruses (HCoVs) has not been established using reverse transcription polymerase chain reaction techniques in a specimen collection that spans decades. METHODS: We used real-time RT-PCR for 3 HCoVs, HCoV 229E, OC43, and NL63, to test nasal wash specimens that had been obtained from a cohort of children <5 years of age with upper or lower respiratory infection (URI, LRI) who were comprehensively followed during the period from 1977 to 2001. Prospectively collected clinical data and archival samples were analyzed. RESULTS: HCoV was detected in 92/1854 (5.0%) of available samples with no known viral etiology of which 9% were 229E, 59% OC43, and 33% NL63. This represented 10/119 (8.4%) of LRI samples and 82/1735 (4.7%) of URI samples. HCoV was not detected every year, but occurred episodically. The recently described HCoV-NL63 was detected as early as 1981. HCoV was associated with 11.4 LRI episodes/1000 child-years <5 years of age (all in children <2 years of age) and 67.3 URI episodes/1000 child-years <5 years of age. CONCLUSIONS: HCoV-NL63 and OC43 are associated with a significant proportion of LRI in children less than 2 years of age and a substantial number of medically attended URI episodes.


Subject(s)
Coronavirus Infections/epidemiology , Coronavirus/isolation & purification , Respiratory Tract Infections/epidemiology , Child, Preschool , Coronavirus/genetics , Coronavirus Infections/virology , Female , Humans , Incidence , Infant , Logistic Models , Male , Prospective Studies , Respiratory System/virology , Respiratory Tract Infections/virology , Reverse Transcriptase Polymerase Chain Reaction/methods
18.
Proc Natl Acad Sci U S A ; 106(5): 1566-71, 2009 Feb 03.
Article in English | MEDLINE | ID: mdl-19164533

ABSTRACT

Human metapneumovirus (hMPV) is a recently described paramyxovirus that causes lower respiratory infections in children and adults worldwide. The hMPV fusion (F) protein is a membrane-anchored glycoprotein and major protective antigen. All hMPV F protein sequences determined to date contain an Arg-Gly-Asp (RGD) sequence, suggesting that F engages RGD-binding integrins to mediate cell entry. The divalent cation chelator EDTA, which disrupts heterodimeric integrin interactions, inhibits infectivity of hMPV but not the closely related respiratory syncytial virus (RSV), which lacks an RGD motif. Function-blocking antibodies specific for alphavbeta1 integrin inhibit infectivity of hMPV but not RSV. Transfection of nonpermissive cells with alphav or beta1 cDNAs confers hMPV infectivity, whereas reduction of alphav and beta1 integrin expression by siRNA inhibits hMPV infection. Recombinant hMPV F protein binds to cells, whereas Arg-Gly-Glu (RGE)-mutant F protein does not. These data suggest that alphavbeta1 integrin is a functional receptor for hMPV.


Subject(s)
Metapneumovirus/pathogenicity , Receptors, Vitronectin/physiology , Virulence/physiology , Animals , Antibodies, Viral/immunology , Humans , Metapneumovirus/immunology , RNA, Small Interfering , Receptors, Vitronectin/immunology , Swine , Transfection , Viral Fusion Proteins/chemistry , Viral Fusion Proteins/physiology
19.
J Virol ; 82(22): 11410-8, 2008 Nov.
Article in English | MEDLINE | ID: mdl-18786987

ABSTRACT

Human metapneumovirus (hMPV) is a recently discovered paramyxovirus that causes upper and lower respiratory tract infections in infants, the elderly, and immunocompromised individuals worldwide. Here, we developed Venezuelan equine encephalitis virus replicon particles (VRPs) encoding hMPV fusion (F) or attachment (G) glycoproteins and evaluated the immunogenicity and protective efficacy of these vaccine candidates in mice and cotton rats. VRPs encoding hMPV F protein, when administered intranasally, induced F-specific virus-neutralizing antibodies in serum and immunoglobulin A (IgA) antibodies in secretions at the respiratory mucosa. Challenge virus replication was reduced significantly in both the upper and lower respiratory tracts following intranasal hMPV challenge in these animals. However, vaccination with hMPV G protein VRPs did not induce neutralizing antibodies or protect animals from hMPV challenge. Close examination of the histopathology of the lungs of VRP-MPV F-vaccinated animals following hMPV challenge revealed no enhancement of inflammation or mucus production. Aberrant cytokine gene expression was not detected in these animals. Together, these results represent an important first step toward the use of VRPs encoding hMPV F proteins as a prophylactic vaccine for hMPV.


Subject(s)
Metapneumovirus/immunology , Paramyxoviridae Infections/prevention & control , Viral Vaccines/immunology , Administration, Intranasal , Animals , Antibodies, Viral/blood , Cell Line , Encephalitis Virus, Venezuelan Equine/genetics , Immunoglobulin A/analysis , Immunoglobulin G/blood , Lung/pathology , Lung/virology , Macaca mulatta , Mice , Mice, Inbred DBA , Mucous Membrane/immunology , Neutralization Tests , Rats , Respiratory System/virology , Sigmodontinae , Viral Structural Proteins/genetics , Viral Structural Proteins/immunology , Viral Vaccines/administration & dosage
20.
J Virol ; 81(15): 8315-24, 2007 Aug.
Article in English | MEDLINE | ID: mdl-17522220

ABSTRACT

Human metapneumovirus (hMPV) is a recently discovered paramyxovirus that is a major cause of lower-respiratory-tract disease. hMPV is associated with more severe disease in infants and persons with underlying medical conditions. Animal studies have shown that the hMPV fusion (F) protein alone is capable of inducing protective immunity. Here, we report the use of phage display technology to generate a fully human monoclonal antibody fragment (Fab) with biological activity against hMPV. Phage antibody libraries prepared from human donor tissues were selected against recombinant hMPV F protein with multiple rounds of panning. Recombinant Fabs then were expressed in bacteria, and supernatants were screened by enzyme-linked immunosorbent assay and immunofluorescent assays. A number of Fabs that bound to hMPV F were isolated, and several of these exhibited neutralizing activity in vitro. Fab DS7 neutralized the parent strain of hMPV with a 60% plaque reduction activity of 1.1 mug/ml and bound to hMPV F with an affinity of 9.8 x10(-10) M, as measured by surface plasmon resonance. To test the in vivo activity of Fab DS7, groups of cotton rats were infected with hMPV and given Fab intranasally 3 days after infection. Nasal turbinates and lungs were harvested on day 4 postinfection and virus titers determined. Animals treated with Fab DS7 exhibited a >1,500-fold reduction in viral titer in the lungs, with a modest 4-fold reduction in the nasal tissues. There was a dose-response relationship between the dose of DS7 and virus titer. Human Fab DS7 may have prophylactic or therapeutic potential against severe hMPV infection.


Subject(s)
Antibodies, Monoclonal/immunology , Immunoglobulin Fab Fragments/immunology , Metapneumovirus/immunology , Paramyxoviridae Infections/therapy , Recombinant Proteins/immunology , Viral Fusion Proteins/immunology , Animals , Antibodies, Monoclonal/genetics , Cell Line , Epitopes , Humans , Immunoglobulin Fab Fragments/genetics , Infant , Metapneumovirus/genetics , Neutralization Tests , Peptide Library , Rats , Recombinant Proteins/genetics , Sigmodontinae , Viral Fusion Proteins/genetics , Viral Load
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