Contribution of boulder reef habitats to oxygen dynamics of a shallow estuary.

We assessed the importance of boulder reefs to the oxygen dynamics of a shallow estuary during two growing seasons in 2017 and 2018. Using open-system diel oxygen measurements and benthic and pelagic incubations, we evaluated the relative contribution of pelagic and benthic habitats to the ecosystem metabolism along a depth gradient in two areas, with (Reef) and without (Bare) boulder reefs in the Limfjorden, Denmark. System integrated areal rates of gross primary production (GPP) and ecosystem respiration (ER) both increased with depth in both areas. Benthic contribution to system GPP and ER was highest at shallow depth where it represented 47 and 53% respectively. However, with increasing depth pelagic processes dominated GPP and ER (98 and 94%) even in the Reef area. Although the Reef area had higher biomass of auto- and heterotrophic organisms (macroalgae and macrofauna), benthic GPP was at similar level in both areas, due to a significant contribution from micro-phytobenthic organisms. The Reef area had lower sediment pools of organic matter, nitrogen and phosphorous and was slightly more oxygenated compared to the nearby Bare area. Extreme temperatures and higher levels of nutrients in 2018 caused a marked increase in benthic ER rates resulting in net heterotrophy (NEM = GPP - ER < 0) in 2018 compared to net autotrophy (NEM > 0) in 2017. Under current eutrophic conditions, boulder reefs do not contribute positively to the oxygen dynamics in the estuary. Reoccurring blooms of phytoplankton with high organic matter decomposition combined with high temperatures and dominance of fauna stimulate depletion of oxygen around the reefs. Significant improvements in water clarity are needed to regrow perennial macroalgae and induce net autotrophy. Under current turbid conditions, it is only recommended to establish boulder reefs in shallow (<3 m) parts of the estuary.

Seasonal changes in primary production and respiration in a subtropical lake undergoing eutrophication.

The balance between gross primary production (GPP) and respiration (R) is frequently used to estimate the role of lakes in the carbon cycle. Seasonal changes in the carbon cycle of subtropical lakes are often underestimated, but changes in meteorological and limnological characteristics often follow the well-defined climatic seasons. Based on 1 year's free-water dissolved oxygen and temperature measurements, we investigated the seasonal changes in primary production and respiration in subtropical Peri Lake in Southern Brazil, which is currently undergoing eutrophication. We expected that periods of high light availability and temperature would lead to a net autotrophic condition. Furthermore, we explored the seasonal coupling between GPP and R, expecting that different sources of organic matter would have different effects on the metabolic rates. We found that Peri Lake was predominately net heterotrophic (GPP < R). GPP was high during summer and autumn and low in winter, as was R, coinciding with the seasonal changes occurring in light and temperature. Light conditions were of essential importance for the variations in GPP, while respiration was fueled by both autochthonous and allochthonous organic matter. Constant external input of organic matter resulted in a generally low coupling between GPP and R. A tighter coupling between GPP and R was observed in spring as a result of higher productivity, while a decoupling in autumn was due to intensified allochthonous organic matter runoff caused by rainfall and wind. We found that higher productivity rates in summer did not shift the system to an autotrophic condition and that Peri Lake functioned as a carbon source, light and organic matter being the prime drivers for the metabolic rates.

Linking shifts in bacterial community with changes in dissolved organic matter pool in a tropical lake.

Bacterioplankton communities have a pivotal role in the global carbon cycle. Still the interaction between microbial community and dissolved organic matter (DOM) in freshwater ecosystems remains poorly understood. Here, we report results from a 12-day mesocosm study performed in the epilimnion of a tropical lake, in which inorganic nutrients and allochthonous DOM were supplemented under full light and shading. Although the production of autochthonous DOM triggered by nutrient addition was the dominant driver of changes in bacterial community structure, temporal covariations between DOM optical proxies and bacterial community structure revealed a strong influence of community shifts on DOM fate. Community shifts were coupled to a successional stepwise alteration of the DOM pool, with different fractions being selectively consumed by specific taxa. Typical freshwater clades as Limnohabitans and Sporichthyaceae were associated with consumption of low molecular weight carbon, whereas Gammaproteobacteria and Flavobacteria utilized higher molecular weight carbon, indicating differences in DOM preference among clades. Importantly, Verrucomicrobiaceae were important in the turnover of freshly produced autochthonous DOM, ultimately affecting light availability and dissolved organic carbon concentrations. Our findings suggest that taxonomically defined bacterial assemblages play definite roles when influencing DOM fate, either by changing specific fractions of the DOM pool or by regulating light availability and DOC levels.

Bacterioplankton Activity in a Meso-eutrophic Subtropical Coastal Lagoon.

The aim of this study was to investigate whether the bacterioplankton activity in the meso-eutrophic Conceição Lagoon would increase significantly under allochthonous inputs of inorganic nutrients and organic carbon. Abundance and biomass of bacterioplankton were evaluated under three treatments: light (14 h light/10 h dark), complete darkness (dark-control), and nutrient (C + N + P-dark, 100 : 10 : 1) enrichments during 72 h. Nutrient enrichments promoted a significant increase in abundance (maximum of 19.0 ×109 cells·L-1 in the first 32 hours) and biomass of the heterotrophic bacterioplankton, which induced the formation of large clusters. Bacterial biomass remained constant in the non-enriched incubations (dark-control and light). Bacterial growth rates were significantly higher after nutrient additions (1.35 d-1), followed by control (0.79 d-1), and light (0.63 d-1) treatments, which were statistically equal (p > 0.05). Bacterial production rates were also significantly higher under nutrient additions (1.28 d-1), compared to the control and light (0.50 d-1 and 0.44 d-1, respectively), demonstrating that bacterial growth and production in this meso-eutrophic lagoon are under an immediate "bottom-up" regulation, followed by a potential top-down effect. These facts reinforce the urgency on improving the local wastewater management plan in order to prevent further expansion of anoxic waters.

Winter is coming: Food web structure and seasonality in a subtropical freshwater coastal lake.

Food web studies provide a useful tool to assess the organization and complexity of natural communities. Nevertheless, the seasonal dynamics of food web properties, their environmental correlates, and potential association with community diversity and stability remain poorly studied. Here, we condensed an incomplete 6-year community dataset of a subtropical coastal lake to examine how monthly variation in diversity impacts food web structure over an idealized time series for an averaged year. Phytoplankton, zooplankton, macroinvertebrates, and fish were mostly resolved to species level (n = 120 trophospecies). Our results showed that the seasonal organization of the food web could be aggregated into two clusters of months grouped here as 'summer' and 'winter'. During 'winter', the food web decreases in size and complexity, with the number of trophospecies dropping from 106 to 82 (a 22.6% decrease in the number of nodes) and the trophic interactions from 1,049 to 637 between month extremes (a 39.3% drop in the number of links). The observed simplification in food web structure during 'winter' suggests that community stability is more vulnerable to the impact of any change during this period.

High Primary Production Contrasts with Intense Carbon Emission in a Eutrophic Tropical Reservoir.

Recent studies from temperate lakes indicate that eutrophic systems tend to emit less carbon dioxide (CO2) and bury more organic carbon (OC) than oligotrophic ones, rendering them CO2 sinks in some cases. However, the scarcity of data from tropical systems is critical for a complete understanding of the interplay between eutrophication and aquatic carbon (C) fluxes in warm waters. We test the hypothesis that a warm eutrophic system is a source of both CO2 and CH4 to the atmosphere, and that atmospheric emissions are larger than the burial of OC in sediments. This hypothesis was based on the following assumptions: (i) OC mineralization rates are high in warm water systems, so that water column CO2 production overrides the high C uptake by primary producers, and (ii) increasing trophic status creates favorable conditions for CH4 production. We measured water-air and sediment-water CO2 fluxes, CH4 diffusion, ebullition and oxidation, net ecosystem production (NEP) and sediment OC burial during the dry season in a eutrophic reservoir in the semiarid northeastern Brazil. The reservoir was stratified during daytime and mixed during nighttime. In spite of the high rates of primary production (4858 ± 934 mg C m(-2) d(-1)), net heterotrophy was prevalent due to high ecosystem respiration (5209 ± 992 mg C m(-2) d(-1)). Consequently, the reservoir was a source of atmospheric CO2 (518 ± 182 mg C m(-2) d(-1)). In addition, the reservoir was a source of ebullitive (17 ± 10 mg C m(-2) d(-1)) and diffusive CH4 (11 ± 6 mg C m(-2) d(-1)). OC sedimentation was high (1162 mg C m(-2) d(-1)), but our results suggest that the majority of it is mineralized to CO2 (722 ± 182 mg C m(-2) d(-1)) rather than buried as OC (440 mg C m(-2) d(-1)). Although temporally resolved data would render our findings more conclusive, our results suggest that despite being a primary production and OC burial hotspot, the tropical eutrophic system studied here was a stronger CO2 and CH4 source than a C sink, mainly because of high rates of OC mineralization in the water column and sediments.

Dynamics of planktonic prokaryotes and dissolved carbon in a subtropical coastal lake.

To understand the dynamics of planktonic prokaryotes in a subtropical lake and its relationship with carbon, we conducted water sampling through four 48-h periods in Peri Lake for 1 year. Planktonic prokaryotes were characterized by the abundance and biomass of heterotrophic bacteria (HB) and of cyanobacteria (coccoid and filamentous cells). During all samplings, we measured wind speed, water temperature (WT), pH, dissolved oxygen (DO), precipitation, dissolved organic carbon (DOC), dissolved inorganic carbon (DIC), and carbon dioxide (CO2). DOC was higher in the summer (average = 465 µM - WT = 27°C) and lower in the winter (average = 235 µM - WT = 17°C), with no significant variability throughout the daily cycles. CO2 concentrations presented a different pattern, with a minimum in the warm waters of the summer period (8.31 µM) and a maximum in the spring (37.13 µM). Daily trends were observed for pH, DO, WT, and CO2. At an annual scale, both biological and physical-chemical controls were important regulators of CO2. HB abundance and biomass were higher in the winter sampling (5.60 × 10(9) cells L(-1) and 20.83 µmol C L(-1)) and lower in the summer (1.87 × 10(9) cells L(-1) and 3.95 µmol C L(-1)). Filamentous cyanobacteria (0.23 × 10(8)-0.68 × 10(8) filaments L(-1)) produced up to 167.16 µmol C L(-1) as biomass (during the warmer period), whereas coccoid cyanobacteria contributed only 0.38 µmol C L(-1). Precipitation, temperature, and the biomass of HB were the main regulators of CO2 concentrations. Temperature had a negative effect on the concentration of CO2, which may be indirectly attributed to high heterotroph activity in the autumn and winter periods. DOC was positively correlated with the abundance of total cyanobacteria and negatively with HB. Thus, planktonic prokaryotes have played an important role in the dynamics of both dissolved inorganic and organic carbon in the lake.