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1.
Structure ; 14(1): 159-66, 2006 Jan.
Article in English | MEDLINE | ID: mdl-16407075

ABSTRACT

FOXP (FOXP1-4) is a newly defined subfamily of the forkhead box (FOX) transcription factors. A mutation in the FOXP2 forkhead domain cosegregates with a severe speech disorder, whereas several mutations in the FOXP3 forkhead domain are linked to the IPEX syndrome in human and a similar autoimmune phenotype in mice. Here we report a 1.9 A crystal structure of the forkhead domain of human FOXP2 bound to DNA. This structure allows us to revise the previously proposed DNA recognition mechanism and provide a unifying model of DNA binding for the FOX family of proteins. Our studies also reveal that the FOXP2 forkhead domain can form a domain-swapped dimer, made possible by a strategic substitution of a highly conserved proline in conventional FOX proteins with alanine in the P subfamily. Disease-causing mutations in FOXP2 and FOXP3 map either to the DNA binding surface or the domain-swapping dimer interface, functionally corroborating the crystal structure.


Subject(s)
DNA-Binding Proteins/metabolism , Forkhead Transcription Factors/chemistry , Amino Acid Sequence , Crystallography, X-Ray , Dimerization , Forkhead Transcription Factors/genetics , Forkhead Transcription Factors/metabolism , Humans , Molecular Sequence Data , Mutation , Protein Binding , Protein Structure, Tertiary
2.
Proc Natl Acad Sci U S A ; 100(7): 3647-52, 2003 Apr 01.
Article in English | MEDLINE | ID: mdl-12644706

ABSTRACT

A binding site for metal ions has been created on the surface of horse heart myoglobin (Mb) near the heme 6-propionate group by replacing K45 and K63 with glutamyl residues. One-dimensional (1)H NMR spectroscopy indicates that Mn(2+) binds in the vicinity of the heme 6-propionate as anticipated, and potentiometric titrations establish that the affinity of the new site for Mn(2+) is 1.28(4) x 10(4) M(-1) (pH 6.96, ionic strength I = 17.2 microM, 25 degrees C). In addition, these substitutions lower the reduction potential of the protein and increase the pK(a) for the water molecule coordinated to the heme iron of metmyoglobin. The peroxidase [2,2'-azinobis(3-ethylbenzthiazoline-6-sulfonic acid), ABTS, as substrate] and the Mn(2+)-peroxidase activity of the variant are both increased approximately 3-fold. In contrast to wild-type Mb, both the affinity for azide and the midpoint potential of the variant are significantly influenced by the addition of Mn(2+). The structure of the variant has been determined by x-ray crystallography to define the coordination environment of bound Mn(2+) and Cd(2+). Although slight differences are observed between the geometry of the binding of the two metal ions, both are hexacoordinate, and neither involves coordination by E63.


Subject(s)
Heme/metabolism , Metals/metabolism , Myoglobin/chemistry , Animals , Binding Sites , Chlorides/chemistry , Crystallography, X-Ray/methods , Electrochemistry/methods , Heme/chemistry , Horses , Kinetics , Manganese Compounds/chemistry , Models, Molecular , Mutagenesis , Myoglobin/genetics , Myoglobin/metabolism , Recombinant Proteins/chemistry , Recombinant Proteins/metabolism , Spectrophotometry/methods
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