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1.
IEEE Trans Neural Netw Learn Syst ; 33(5): 1857-1866, 2022 05.
Article in English | MEDLINE | ID: mdl-33852400

ABSTRACT

Predators in nature grip their prey in different ways, which give innovational ideas of gripping approaches in industrial applications. Octopus performs flexible gripping with the help of vacuum grippers, suction cups, which inspired a new type of microgripper for biological sample micromanipulation. The proposed gripper consists of a glass pipette and a pump driven by a step-motor. The step-motor is controlled with adaptive robust control to adjust the gripping pressure applied on the biological sample. A dynamic model is developed for the biological sample aiming for better deformation control performance. A visual detection algorithm is developed for data processing to identify the parameters in the dynamic model and the detection result of visual algorithm is also used as feedback of adaptive robust control, which diminishes the negative influence of parameter and model uncertainties. Zebrafish larva was used as the testing sample for experiment and the corresponding parameters were identified experimentally. The experimental results correlated well with the model predicted deformation curve and visual detection algorithm provided promising accuracy, which is less than [Formula: see text]. Adaptive robust control provides fast and accuracy response in point-to-point deformation testing, and the average responding time is less than 30 s and the average error is no larger than 1 pixel.


Subject(s)
Octopodiformes , Animals , Equipment Design , Neural Networks, Computer , Zebrafish
2.
Comput Biol Med ; 136: 104702, 2021 09.
Article in English | MEDLINE | ID: mdl-34352455

ABSTRACT

As a typical multicellular model organism, the zebrafish has been increasingly used in biological research. Despite the efforts to develop automated zebrafish larva imaging systems, existing ones are still defective in terms of reliability and automation. This paper presents an improved zebrafish larva high-throughput imaging system, which makes improvements to the existing designs in the following aspects. Firstly, a single larva extraction strategy is developed to make larva loading more reliable. The aggregated larvae are identified, classified by their numbers and patterns, and separated by the aspiration pipette or water stream. Secondly, the dynamic model of larva motion in the capillary is established and an adaptive robust controller is designed for decelerating the fast-moving larva to ensure the survival rate. Thirdly, rotating the larva to the desired orientation is automated by developing an algorithm to estimate the larva's initial rotation angle. For validating the improved larva imaging system, a real-time heart rate monitoring experiment is conducted as an application example. Experimental results demonstrate that the goals of the improvements have been achieved. With these improvements, the improved zebrafish larva imaging system remarkably reduces human intervention and increases the efficiency and success/survival rates of larva imaging.


Subject(s)
Algorithms , Zebrafish , Animals , Automation , Humans , Larva , Reproducibility of Results
3.
IEEE Trans Biomed Eng ; 68(1): 47-55, 2021 01.
Article in English | MEDLINE | ID: mdl-32746018

ABSTRACT

OBJECTIVE: The zebrafish has been proven to be a significant model organism in various research fields. For investigating the in vivo properties of biologics within zebrafish with developed organs, an automated zebrafish larva organ injection system is crucially needed. However, current zebrafish larva manipulation techniques cannot accomplish this operation efficiently and continuously. METHODS: In this paper, we present a novel zebrafish larva manipulation technique with two key steps in the microinjection system: orienting and aspirating zebrafish larvae automatically. The orientation control is realized in a customized microfluidic chip, after which the larva moves tail-first until reaching the channel exit. Then a dynamic model of larva aspiration is established and an adaptive robust controller is designed. RESULTS: Experimental results demonstrate that high success rate can be reached and damage to larva body is reduced. CONCLUSION: The presented strategy is capable of orienting and aspirating zebrafish larvae smoothly and efficiently. SIGNIFICANCE: The proposed methods have the advantage of low cost, easy implementability and good stability.


Subject(s)
Microfluidics , Zebrafish , Animals , Larva , Microinjections
4.
Article in English | MEDLINE | ID: mdl-34877140

ABSTRACT

The congruent matching cells (CMC) method was invented at the National Institute of Standards and Technology (NIST) for firearm evidence identification and error rate estimation. The CMC method divides the correlated image pairs into cells and uses four parameters to quantify topography similarity and pattern congruency of the correlated cell pairs in firearm breech face impressions on fired cartridge cases. A preliminary conservative numerical identification criterion of C = 6 CMCs was suggested for identifying images of cartridge cases fired from the same firearm. The CMC method was validated by correlations using both three-dimensional (3D) topography images and two-dimensional (2D) optical images from a set of 40 cartridge cases fired from a firearm set composed of 10 consecutively manufactured pistol slides. However, in the original CMC method, due to the difference in the effective data area of the correlated cells, final CMCs obtained from an image pair presented different data quantity (or validity level), and thus the empirical criterion C = 6 CMCs did not remain optimal for identification when the correlated cell size changed. In this study, a normalized congruent matching area (NCMA) method that considers the difference in the data area in each correlated cell pair was developed. Based on the NCMA method, an optimal range of cell sizes for breech face identification with granular characteristics was determined. A binomial model was used to fit the known nonmatching NCMA probability distribution Ψ NCMA, and a beta-binomial model was used to fit the known matching NCMA probability distribution Φ NCMA. An experimental improvement in the normalized identification criterion C of around 6 % was observed in the validation tests when the cell sizes were in the optimal range.

5.
Sensors (Basel) ; 17(12)2017 Nov 28.
Article in English | MEDLINE | ID: mdl-29182538

ABSTRACT

The human fingertip is an exquisitely powerful bio-tactile sensor in perceiving different materials based on various highly-sensitive mechanoreceptors distributed all over the skin. The tactile perception of surface roughness and material hardness can be estimated by skin vibrations generated during a fingertip stroking of a surface instead of being maintained in a static position. Moreover, reciprocating sliding with increasing velocities and pressures are two common behaviors in humans to discriminate different materials, but the question remains as to what the correlation of the sliding velocity and normal load on the tactile perceptions of surface roughness and hardness is for material discrimination. In order to investigate this correlation, a finger-inspired crossed-I beam structure tactile tester has been designed to mimic the anthropic tactile discrimination behaviors. A novel method of characterizing the fast Fourier transform integral (FFT) slope of the vibration acceleration signal generated from fingertip rubbing on surfaces at increasing sliding velocity and normal load, respectively, are defined as kv and kw, and is proposed to discriminate the surface roughness and hardness of different materials. Over eight types of materials were tested, and they proved the capability and advantages of this high tactile-discriminating method. Our study may find applications in investigating humanoid robot perceptual abilities.

6.
Forensic Sci Int ; 263: 186-193, 2016 06.
Article in English | MEDLINE | ID: mdl-27131218

ABSTRACT

Comparison of firing pin impressions of cartridge cases is an important part of firearms evidence identification. However, compared with breach face impressions, there is only a limited surface area over which firing pin impressions can be compared. Furthermore, the curvature of firing pin impressions makes it difficult to perform automatic correlations of the surfaces. In this study, a new method and related algorithm named congruent matching cross-sections (CMX) are proposed. Each firing pin impression is sliced into layers and the resulting circular cross-sections are converted to two dimensional linear profiles by a polar coordinate transformation. The differential profile extraction method is used for extracting the high frequency micro-features, or the individual characteristics, for accurate correlation. Three parameters are proposed for determining whether these pairwise firing pin impressions are fired from the same firearm. The cross-correlation function (CCF) is used for quantifying similarity of the pairwise profiles which represent the two correlated firing pin images. If the correlated cartridge pair is fired from the same firearm, the maximum CCF value between each of the profile pairs from the reference and the correlated firing pin impressions will be high. The other two parameters relate to the horizontal (or angular) and vertical range of relative shifts that the profiles undergo to obtain the maximum CCF. These shifts are the phase angle θ which corresponds to a horizontal shift of the 2D profiles and the vertical shift distance of slice section, i.e. where the profiles match in the depth of the impression. These shift parameters are used to determine the congruency of the pairwise profile patterns. When these parameter values and their statistical distributions are collected for analysis, the CMX number is derived as a key parameter for a conclusive identification or exclusion. Validation tests using 40 cartridge cases of three different brands fired from 10 firearms produced by three different manufacturers yielded clear separation between known matching (KM) and known non-matching (KNM) image pairs, which strongly supports the effectiveness and feasibility of the proposed CMX method.

7.
Article in English | MEDLINE | ID: mdl-26958439

ABSTRACT

This paper deals with the application of the spline filter as an areal filter for surface metrology. A profile (2D) filter is often applied in orthogonal directions to yield an areal filter for a three-dimensional (3D) measurement. Unlike the Gaussian filter, the spline filter presents an anisotropic characteristic when used as an areal filter. This disadvantage hampers the wide application of spline filters for evaluation and analysis of areal surface topography. An approximation method is proposed in this paper to overcome the problem. In this method, a profile high-order spline filter serial is constructed to approximate the filtering characteristic of the Gaussian filter. Then an areal filter with isotropic characteristic is composed by implementing the profile spline filter in the orthogonal directions. It is demonstrated that the constructed areal filter has two important features for surface metrology: an isotropic amplitude characteristic and no end effects. Some examples of applying this method on simulated and practical surfaces are analyzed.

8.
J Res Natl Inst Stand Technol ; 120: 102-12, 2015.
Article in English | MEDLINE | ID: mdl-26958441

ABSTRACT

The Congruent Matching Cells (CMC) method was invented at the National Institute of Standards and Technology (NIST) for firearm evidence identifications. The CMC method divides the measured image of a surface area, such as a breech face impression from a fired cartridge case, into small correlation cells and uses four identification parameters to identify correlated cell pairs originating from the same firearm. The CMC method was validated by identification tests using both 3D topography images and optical images captured from breech face impressions of 40 cartridge cases fired from a pistol with 10 consecutively manufactured slides. In this paper, we discuss the processing of the cell correlations and propose an improved algorithm of the CMC method which takes advantage of the cell correlations at a common initial phase angle and combines the forward and backward correlations to improve the identification capability. The improved algorithm is tested by 780 pairwise correlations using the same optical images and 3D topography images as the initial validation.

9.
J Res Natl Inst Stand Technol ; 120: 129-37, 2015.
Article in English | MEDLINE | ID: mdl-26958443

ABSTRACT

Spline filters and their corresponding robust filters are commonly used filters recommended in ISO (the International Organization for Standardization) standards for surface evaluation. Generally, these linear and non-linear spline filters, composed of symmetric, positive-definite matrices, are solved in an iterative fashion based on a Cholesky decomposition. They have been demonstrated to be relatively efficient, but complicated and inconvenient to implement. A new spline-filter algorithm is proposed by means of the discrete cosine transform or the discrete Fourier transform. The algorithm is conceptually simple and very convenient to implement.

10.
J Res Natl Inst Stand Technol ; 119: 575-82, 2014.
Article in English | MEDLINE | ID: mdl-26601045

ABSTRACT

The Congruent Matching Cells (CMC) method for ballistics identification was invented at the National Institute of Standards and Technology (NIST). The CMC method is based on the correlation of pairs of small correlation cells instead of the correlation of entire images. Four identification parameters - T CCF, T θ, T x and T y are proposed for identifying correlated cell pairs originating from the same firearm. The correlation conclusion (matching or non-matching) is determined by whether the number of CMC is ≥ 6. This method has been previously validated using a set of 780 pair-wise 3D topography images. However, most ballistic images stored in current local and national databases are in an optical intensity (grayscale) format. As a result, the reliability of applying the CMC method on optical intensity images is an important issue. In this paper, optical intensity images of breech face impressions captured on the same set of 40 cartridge cases are correlated and analyzed for the validation test of CMC method using optical images. This includes correlations of 63 pairs of matching images and 717 pairs of non-matching images under top ring lighting. Tests of the method do not produce any false identification (false positive) or false exclusion (false negative) results, which support the CMC method and the proposed identification criterion, C = 6, for firearm breech face identifications using optical intensity images.

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