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1.
Mitochondrial DNA B Resour ; 6(4): 1348-1350, 2021 Apr 08.
Article in English | MEDLINE | ID: mdl-33889745

ABSTRACT

The complete mitochondrial genome of Sinularia penghuensis was sequenced and analyzed using next-generation sequencing. The present mitochondrial genome was 18730 bp in length, containing 14 protein-coding genes (PCGs) (cox1-cox3.nad1-nad6, nad4L, atp6, atp8, cytb, and MutS), two ribosomal RNA genes (rRNAs) (12S and 16S), and one transfer RNA gene (Met-tRNA). The phylogenetic analysis of family Alcyoniidae revealed that S. penghuensis and Sinularia maxima cluster together. Five species in Sinularia reveals high identity in mitogenome sequences that the lowest variable sites (SNPs) were found between S. penghuensis and S. maxima.

2.
Mitochondrial DNA B Resour ; 4(2): 3734-3735, 2019 Oct 24.
Article in English | MEDLINE | ID: mdl-33366165

ABSTRACT

The complete mitochondrial genome of Sarcophyton trocheliophorum was completed using next-generation sequencing (NGS) method. The mitochondrial genome is a circular molecule of 18,508 bp in length, containing 14 protein-coding genes, two ribosomal RNA genes and one transfer RNA gene (Met-tRNA). The base composition is 30.45% A, 16.03% C, 19.13% G, and 34.40% T, with an A + T content of 64.85%. A phylogenetic analysis of Alcyoniidae showed that genus Sarcophyton had the closest relationship with Sinularia.

3.
Exp Ther Med ; 4(5): 913-917, 2012 Nov.
Article in English | MEDLINE | ID: mdl-23226748

ABSTRACT

Revealing the key molecules regulating the stress-response pathways in human cells is an intriguing problem. Chaperones, such as glucose-regulated protein 78 (GRP78) and heat shock protein 27 (HSP27), are important molecules for protecting the viability of human cells; however, it remains to be further clarified whether the molecules differentially modulate cellular responses to various types of stressors, such as DNA-damaging ultraviolet ray C (principally 254-nm wavelength, UVC) and cytocidal cytokine interferons. In the present study, the human breast cancer cell lines KT and MCF-7 were examined for GRP78 and HSP27 expression following exposure to UVC and human interferon-ß (HuIFN-ß). The KT cells demonstrated a higher sensitivity to both UVC and HuIFN-ß lethality than MCF-7 cells. The cellular expression levels of GRP78 in KT cells, assessed by western blot analysis, were approximately 2-fold higher than that in MCF-7 cells, while the expression of HSP27 in the KT cells was 20% of the expression in the MCF-7 cells. Decreased resistance to UVC lethality was observed in GRP78 siRNA-transfected KT cells. In addition, HSP27 cDNA transfection of KT cells resulted in an increased resistance to UVC lethality. The cDNA-transfected KT cells showed an increased viability against HuIFN-ß, compared with that of empty vector-transfected cells. By contrast, KT cells pretreated with HuIFN-ß and irradiated with UVC demonstrated an increased resistance to UVC lethality, in association with increased levels of HSP27 expression. Thus, HSP27 may control the survival response pathways to both UVC and HuIFN-ß in the human cells examined.

4.
Radiat Res ; 176(6): 732-42, 2011 Dec.
Article in English | MEDLINE | ID: mdl-22141411

ABSTRACT

In this study, we found that refractoriness to ultraviolet (UVC) light-induced cell death was increased in UVC-radiation-sensitive cells derived from Cockayne syndrome patients when the cells were precultured in medium supplemented with recombinant annexin II (rANX II). In CS3BES cells, an immortal cell line derived from Cockayne syndrome patients, the rANX II supplementation-induced UVC-radiation resistance was suppressed by treatment with an anti-annexin II antibody and EGTA. The amount of biotinylated annexin II on the cell surface increased in the rANX II-supplemented cells but did not increase in the cells that were cotreated with rANX II and EGTA. The capacity to remove UVC-radiation-damaged DNA, (6-4) photoproducts and cyclobutane pyrimidine dimers, was the same in cells that were precultured with rANX II and in control cells that did not receive rANX II supplementation. The rANX II supplementation-induced UVC-radiation resistance was also observed in nucleotide excision repair-deficient cells and xeroderma pigmentosum group A-downregulated cells. The Bcl-xL to Bax protein ratios, an index of survival activity in cells exposed to lethal stresses, were increased in the cells that had been precultured in rANX II for 24 h prior to UVC irradiation. Treatment with a phosphatidylinositol 3-kinase inhibitor suppressed the increased UVC-radiation resistance and Bcl-xL to Bax ratios in the cells with rANX II supplementation. Furthermore, downregulation of Bcl-xL by siRNA transfection also suppressed the UVC-radiation resistance that was induced by rANX II supplementation. These results suggest that the increase in the Bcl-xL to Bax ratios may be associated with enhanced resistance to UVC-radiation-induced cell death.


Subject(s)
Annexin A2/pharmacology , Extracellular Space , Radiation Tolerance/drug effects , Recombinant Proteins/pharmacology , Ultraviolet Rays , bcl-2-Associated X Protein/metabolism , bcl-X Protein/metabolism , Cell Culture Techniques , Cell Survival/drug effects , Cell Survival/radiation effects , Cockayne Syndrome/pathology , Down-Regulation/drug effects , Down-Regulation/radiation effects , Enzyme Inhibitors/pharmacology , Extracellular Space/drug effects , Extracellular Space/radiation effects , HeLa Cells , Humans , Phosphoinositide-3 Kinase Inhibitors , Radiation Tolerance/radiation effects
5.
Biosci Biotechnol Biochem ; 75(9): 1685-91, 2011.
Article in English | MEDLINE | ID: mdl-21897041

ABSTRACT

Little is known about the ability of miso, to modulate mutability in human cells. We have observed increased levels of glucose-regulated protein 78 (GRP78) expression in association with suppression of mutation in human RSa cells irradiated with ultraviolet C (UVC). Here we examined to determine whether miso treatment results in increased GRP78 expression and suppression of UVC mutagenicity in RSa cells. Supernatants of water extracts of miso products and their components were tested. In the sample-treated cells, the amount of GRP78, as estimated by RT-PCR and immunoblotting analysis, increased, and the UVC-induced ouabain resistant mutation (Oua(R)) and the K-ras codon 12-base substitution mutation frequency decreased. This decrease was not observed in cells with downregulation of GRP78 by GRP78 siRNA transfection. The results suggest that miso suppresses UVC mutagenicity by increasing GRP78 expression in human cells.


Subject(s)
Fibroblasts/drug effects , Fibroblasts/radiation effects , Gene Expression , Heat-Shock Proteins , Mutation , Plant Extracts/pharmacology , Soy Foods , Blotting, Western , Cell Line, Transformed , Codon , Endoplasmic Reticulum Chaperone BiP , Fibroblasts/cytology , Fibroblasts/metabolism , Gene Expression/drug effects , Gene Expression/radiation effects , Gene Silencing/drug effects , Genes, ras/drug effects , Genes, ras/radiation effects , Heat-Shock Proteins/agonists , Heat-Shock Proteins/genetics , Heat-Shock Proteins/metabolism , Humans , Japan , Mutation/drug effects , Mutation/radiation effects , Mutation Rate , Ouabain/pharmacology , Plant Extracts/chemistry , RNA, Small Interfering/genetics , RNA, Small Interfering/pharmacology , Reverse Transcriptase Polymerase Chain Reaction , Ultraviolet Rays/adverse effects
6.
Biosci Biotechnol Biochem ; 73(6): 1318-22, 2009 Jun.
Article in English | MEDLINE | ID: mdl-19502736

ABSTRACT

We have reported that heat shock protein 27 (HSP27) and annexin II are involved in the protection of human cells against UVC-induced cell death. In this study we tried to confirm the combined roles of HSP27 and annexin II in cell death after UVC irradiation. In RSa cells with sensitivity to UVC, expression of annexin II decreased after UVC irradiation, but not in AP(r)-1 cells with increased resistance to UVC. HSP27 siRNA-transfected AP(r)-1 cells were sensitized to UVC lethality and showed decreased annexin II expression after UVC irradiation. In contrast, transfection of RSa cells with HSP27 cDNA increased their resistance to UVC lethality and caused increased annexin II expression. Furthermore, over-production of annexin II in RSa cells resulted in increased resistance to UVC lethality. This study indicates the involvement of cellular HSP27 expression in the UVC susceptibility of human cells, which occurs in association with regulation of annexin II expression.


Subject(s)
Annexin A2/physiology , Cell Death/physiology , HSP27 Heat-Shock Proteins/physiology , Ultraviolet Rays , Base Sequence , Cell Death/radiation effects , Cell Line , DNA Primers , HSP27 Heat-Shock Proteins/genetics , Humans , Polymerase Chain Reaction
7.
Photochem Photobiol ; 84(6): 1455-61, 2008.
Article in English | MEDLINE | ID: mdl-18494762

ABSTRACT

Heat shock protein 27 (HSP27) is implicated in diverse biologic functions as a molecular chaperone. We found that HSP27 is involved in the protection of human cells against UVC lethality. To elucidate the molecular mechanisms underlying UVC resistance, we searched for HSP27-interacted proteins related to resistance in UVC-resistant human cells, APr-1. Three candidates for HSP27-interacted proteins were found from cell lysates using an affinity column coupled with GST-fused HSP27 protein. Interaction between HSP27 and two candidates, annexin II and HSP70, was confirmed by immunoprecipitation analysis. After UVC irradiation, the amount of the complex of HSP27 and annexin II decreased in the postnuclear fraction, while it increased in the nuclear fraction. Cells transfected with annexin II-siRNA were more susceptible to UVC lethality. These results suggest that annexin II is a novel HSP27-interacted protein which is involved in UVC resistance in human cells, at least those tested here.


Subject(s)
Annexin A2/metabolism , Apoptosis/radiation effects , HSP27 Heat-Shock Proteins/metabolism , Ultraviolet Rays , Cell Line , Humans , Protein Binding , Substrate Specificity
8.
Cell Biol Int ; 29(8): 662-8, 2005 Aug.
Article in English | MEDLINE | ID: mdl-15963736

ABSTRACT

Proteases have received attention as important cellular components responsible for stress response in human cells. However, little is known about the role of proteases in the early steps of cell response after X-ray irradiation. In the present study, we first searched for proteases whose activity levels are changed soon after X-ray irradiation in human RSa cells with a high sensitivity to X-ray cell-killing. RSa cells showed an increased level of fibrinolytic protease activity within 10 min after irradiation with X-ray (up to 3 Gy). The induced protease activity was proved to be inhibited by leupeptin. We next examined whether this protease inducibility is related to the X-ray susceptibility of cells. Treatment of RSa cells with leupeptin prior to X-ray irradiation resulted in lowered colony survival and an increased ratio of G(2)/M-arrested cells and apoptotic cells. These results suggest that leupeptin-sensitive proteases are involved in the resistance of human RSa cells to X-ray cell-killing.


Subject(s)
Cell Survival/drug effects , Cell Survival/radiation effects , Cysteine Proteinase Inhibitors/pharmacology , Drug Resistance, Neoplasm , Leupeptins/pharmacology , Peptide Hydrolases/metabolism , Apoptosis/drug effects , Apoptosis/radiation effects , Blotting, Western , Cell Division/drug effects , Cell Division/radiation effects , Dose-Response Relationship, Radiation , Fibrinolysis/drug effects , Fibrinolysis/radiation effects , Flow Cytometry , G2 Phase/drug effects , G2 Phase/radiation effects , Humans , Peptide Hydrolases/chemistry , Radiation Tolerance , Tumor Cells, Cultured/drug effects , Tumor Cells, Cultured/enzymology , Tumor Cells, Cultured/radiation effects , X-Rays
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