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1.
J Proteome Res ; 9(9): 4595-603, 2010 Sep 03.
Article in English | MEDLINE | ID: mdl-20812761

ABSTRACT

The human proteins FEZ1 (fasciculation and elongation protein zeta 1) and FEZ2 are orthologs of the protein UNC-76 from C. elegans, involved in the growth and fasciculation of the worms axon. Pull down assays showed that the protein FEZ1 interacts with other proteins (e.g., the protein SCOCO, short coiled-coil protein), mitochondria, and vesicles. These components may therefore represent cargoes to be transported along the microtubule, and the transport may be mediated through FEZ1 reported binding to kinesins (KIF3A). We previously showed that FEZ1 dimerizes in its N-terminal region and interacts with other proteins, including the candidate cargoe proteins, through its C-terminus. Here, we studied the fragment FEZ1(92-194) as well as full-length 6xHis-FEZ1 (1-392) in vitro and endogenous FEZ1 isolated from HEK 293 cells and were able to demonstrate the formation of an intermolecular disulfide bond through FEZ1 Cys-133, which appears to be essential for dimerization. This disulfide bond may be important for the FEZ1 role as a dimeric and bivalent transport adaptor molecule, since it establishes a strong link between the monomers, which could be a prerequisite for the simultaneous binding of two cargoes.


Subject(s)
Adaptor Proteins, Signal Transducing/chemistry , Disulfides/chemistry , Nerve Tissue Proteins/chemistry , Proteomics/methods , Adaptor Proteins, Signal Transducing/genetics , Adaptor Proteins, Signal Transducing/metabolism , Amino Acid Sequence , Cell Adhesion Molecules/chemistry , Cell Adhesion Molecules/metabolism , Cell Line , Conserved Sequence , Disulfides/metabolism , Humans , Mass Spectrometry , Models, Molecular , Molecular Sequence Annotation , Molecular Sequence Data , Nerve Tissue Proteins/genetics , Nerve Tissue Proteins/metabolism , Protein Multimerization , Protein Structure, Tertiary , Protein Transport , Recombinant Fusion Proteins/chemistry , Recombinant Fusion Proteins/genetics , Recombinant Fusion Proteins/metabolism , Scattering, Small Angle , Sequence Alignment , X-Ray Diffraction
2.
J Phys Chem B ; 113(33): 11403-13, 2009 Aug 20.
Article in English | MEDLINE | ID: mdl-19627117

ABSTRACT

This article describes the microstructure and dynamics in the solid state of polyfluorene-based polymers, poly(9,9-dioctylfluorenyl-2,7-diyl) (PFO), a semicrystalline polymer, and poly[(9,9-dioctyl-2,7-divinylene-fluorenylene)-alt-co-{2-methoxy-5-(2-ethyl-hexyloxy)-1,4-phenylene vinylene}, a copolymer with mesomorphic phase properties. These structures were determined by wide-angle X-ray scattering (WAXS) measurements. Assuming a packing model for the copolymer structure, where the planes of the phenyl rings are stacked and separated by an average distance of approximately 4.5 A and laterally spaced by about approximately 16 A, we followed the evolution of these distances as a function of temperature using WAXS and associated the changes observed to the polymer relaxation processes identified by dynamical mechanical thermal analysis. Specific molecular motions were studied by solid-state nuclear magnetic resonance. The onset of the side-chain motion at about 213 K (beta-relaxation) produced a small increase in the lateral spacing and in the stacking distance of the phenyl rings in the aggregated structures. Besides, at about 383 K (alpha-relaxation) there occurs a significant increase in the amplitude of the torsion motion in the backbone, producing a greater increase in the stacking distance of the phenyl rings. Similar results were observed in the semicrystalline phase of PFO, but in this case the presence of the crystalline structure affects considerably the overall dynamics, which tends to be more hindered. Put together, our data explain many features of the temperature dependence of the photoluminescence of these two polymers.

3.
J Nanosci Nanotechnol ; 8(4): 2135-42, 2008 Apr.
Article in English | MEDLINE | ID: mdl-18572624

ABSTRACT

Plastic deformation has proved to be an attractive tool for obtaining ultrafine grained and nanocrystalline metallic materials. A description of plastic deformation as a technique to create nanotexturized polytetrafluoroethylene substrates free of defects, such as pores or impurities, which has potential applications as templates for the oriented growth of organic and inorganic compounds, is presented here. The obtained morphology characterized by nanosized fibrils arrangements was revealed by atomic force microscopy. Nanofibrils with a width from 330 to 980 nm and lengths from 1.85 to 11 microm were observed on polytetrafluoroethylene substrates annealed at 330 degrees C and 390 degrees C, respectively. Wide angle X-ray scattering spectra for untreated and annealed samples show that there is a slight decrease in the amorphous component for samples annealed at 380 degrees C but not for samples annealed at 330 degrees C showing that the amorphous substrate matrix in little altered by the annealing. The pattern formation is associated with superficial polymeric domains that become large crystalline nanofibrils in an amorphous matrix.


Subject(s)
Crystallization/methods , Nanostructures/chemistry , Nanostructures/ultrastructure , Nanotechnology/methods , Polytetrafluoroethylene/chemistry , Macromolecular Substances/chemistry , Materials Testing , Molecular Conformation , Particle Size , Surface Properties
4.
Eur Biophys J ; 35(5): 431-8, 2006 May.
Article in English | MEDLINE | ID: mdl-16598469

ABSTRACT

The present work shows a structural study on the process of incorporation of a hydrophobic drug, Ellipticine (ELPT), into lipid model membranes for drug targeting purpose. The ELPT is an alkaloid that showed an anti-proliferation activity against several types of tumor cells and against the HIV1 virus. We used the zwitterionic lipid dipalmitoyl phosphatidylcholine (DPPC) and four different anionic lipids: cardiolipin (CL), dipalmitoyl phosphatidic acid (DPPA), dipalmitoyl phosphatidylglycerol (DPPG) and dipalmitoyl phosphatidylserine (DPPS), both spread on a Langmuir monolayer and deposited on a solid substrate to mimic a model membrane and study the interaction with the drug ELPT. X-ray reflectivity results pointed toward an increase in drug loading efficiency up to 13.5% mol/mol of ELPT into mixed systems DPPC/CL. This increase in loading efficiency was also accompanied by a slight distortion in the stacking of the bilayers less evidenced after optimization of the molar ratio between the co-lipids. Grazing incidence X-ray diffraction measurements revealed an in-plane lattice distortion due to the presence of hydrocarbon chain backbone ordering in pure systems of DPPC doped with ELPT. The same was not observed in mixed membranes with DPPC/CL and DPPC/DPPA.


Subject(s)
Drug Delivery Systems/methods , Drug Design , Ellipticines/chemistry , Lipid Bilayers/chemistry , Membrane Fluidity , Models, Chemical , Phospholipids/chemistry , Computer Simulation , Models, Molecular
5.
Biophys J ; 86(1 Pt 1): 455-60, 2004 Jan.
Article in English | MEDLINE | ID: mdl-14695288

ABSTRACT

The structure of myelin basic protein (MBP), purified from the myelin sheath in both lipid-free (LF-MBP) and lipid-bound (LB-MBP) forms, was investigated in solution by small angle x-ray scattering. The water-soluble LF-MBP, extracted at pH < 3.0 from defatted brain, is the classical preparation of MBP, commonly regarded as an intrinsically unfolded protein. LB-MBP is a lipoprotein-detergent complex extracted from myelin with its native lipidic environment at pH > 7.0. Under all conditions, the scattering from the two protein forms was different, indicating different molecular shapes. For the LB-MBP, well-defined scattering curves were obtained, suggesting that the protein had a unique, compact (but not globular) structure. Furthermore, these data were compatible with earlier results from molecular modeling calculations on the MBP structure which have been refined by us. In contrast, the LF-MBP data were in accordance with the expected open-coil conformation. The results represent the first direct structural information from x-ray scattering measurements on MBP in its native lipidic environment in solution.


Subject(s)
Lipids/chemistry , Models, Molecular , Myelin Basic Protein/chemistry , X-Ray Diffraction/methods , Computer Simulation , Lipids/analysis , Myelin Basic Protein/analysis , Myelin Basic Protein/classification , Protein Binding , Scattering, Radiation , Solutions
6.
Phys Rev Lett ; 86(23): 5385-8, 2001 Jun 04.
Article in English | MEDLINE | ID: mdl-11384504

ABSTRACT

The exchange interactions in polycrystalline samples of Ca1-xLaxMnO3 (0.00< or =x< or =0.05) are studied by means of Raman scattering and electron paramagnetic resonance. Dramatic reductions in the spin-phonon interactions and magnetic correlations are observed for La doping levels as small as approximately 2%-3%. These results show that the charge carriers play an important role in the overall exchange coupling in the electron-doped manganites, even at very low doping levels.

7.
Appl Biochem Biotechnol ; 63-65: 327-38, 1997.
Article in English | MEDLINE | ID: mdl-18576091

ABSTRACT

Since natural substances like pseudoxanthins exert a positive effect on the cellulogenic ability of Acetobacter xylinum when producing cellulosic pellicles suitable for skin burn therapy, new defined and complex modulators were sought. Ca2+ and Mg2+ (4 mM) were strongly stimulatory. Na+ had no effect and K+ was inhibitory. Ammonium dihydrogen phosphate (0.12 g/L) ensured the same nitrogen supply as the same concentration of yeast extract as measured by cellomembrane dry wt./yield albeit higher yeast extract supplies produced thicker membranes. Corn steep liquor (CSL) was also progressively beneficial from 0.125 to 0.5 mL/L, and this yield could be further improved by the combination of CSL with a tea infusion (source of caffeine). Uridine (precursor for UDP-Glc, sugar donor in cellulose biosynthesis), guanine, guanosine, and its butirylated derivatives (precursors for the positive modulator of cellulose synthetase, di-cGMP) resulted in only moderate stimulation. Sodium phytate and betaine were also slightly stimulatory. The fibrilar product from a new Acetobacter isolate (Ax-M) was characterized as cellulose by comparison with the solid-state(13)C-NMR of algal cellulose. Its X-ray diffractogram was a confirmatory analysis. After incorporation of tamarind xyloglucan to previously air-dried cellulosic pellicles, diffractometry displayed only slight differences. Mercerized (5M NaOH) fresh cellulosic biofilms underwent drastic size reduction (3.5-fold), turning compact nut still flexible if maintained wet.

10.
Braz. j. med. biol. res ; 24(1): 115-22, jan.-mar. 1991. ilus
Article in English | LILACS | ID: lil-99590

ABSTRACT

X-ray diffractometry was in this work to study structural modifications of powdered native collagen submitted to repeated cycles of gradual drying and hydration. Hysteresis effects known to exist in water sorption isotherms of this fibrous protein were detected in the plots of relative humidity vs integrated intensity of the wide angle X-ray reflections which constitute the main features of the diffraction pattern. A gradual loss of structural material was observed after each drying and rehydration process. An increase in the amorphous regions of the fibrils could also be inferred from the diffraction data. Drying the samples up to a critical degree of hydration (0.12 g H2O per g protein) did not produce a hysteresis loop in the plots of the parameters studied. One-step drying-rehydration cycles did not seem to affect the order of the samples since they repeatedly recovered their original structure.The difference between these results and those of the gradual hydration processes may be attributed to the kinetic properties of biopolymer hydration. The rate o water removal seems to be an important factor in the structural modifications proceduced by the hydration (dehydration) process_


Subject(s)
Collagen/chemistry , Humidity , Molecular Conformation , X-Ray Diffraction
11.
Braz J Med Biol Res ; 24(1): 115-22, 1991.
Article in English | MEDLINE | ID: mdl-1823212

ABSTRACT

1. X-ray diffractometry was used in this work to study structural modifications of powdered native collagen submitted to repeated cycles of gradual drying and hydration. 2. Hysteresis effects known to exist in water sorption isotherms of this fibrous protein were detected in the plots of relative humidity vs integrated intensity of the wide angle X-ray reflections which constitute the main features of the diffraction pattern. 3. A gradual loss of structured material was observed after each drying and rehydration process. An increase in the amorphous regions of the fibrils could also be inferred from the diffraction data. 4. Drying the samples up to a critical degree of hydration (0.12 g H2O per g protein) did not produce a hysteresis loop in the plots of the parameters studied. 5. One-step drying-rehydration cycles did not seem to affect the order of the samples since they repeatedly recovered their original structure. The difference between these results and those of the gradual hydration processes may be attributed to the kinetic properties of biopolymer hydration. The rate of water removal seems to be an important factor in the structural modifications produced by the hydration (dehydration) process.


Subject(s)
Collagen/chemistry , Humidity , Protein Conformation , X-Ray Diffraction
12.
Appl Biochem Biotechnol ; 24-25: 253-64, 1990.
Article in English | MEDLINE | ID: mdl-2353811

ABSTRACT

A bacterial strain with morphological and biochemical properties close to Acetobacter xylinum has been cultured in nonagitated, inverted sucrose- and yeast water-based medium for the production of thick, smooth, and floating cellulosic pellicles. The cellulose content (greater than 90%, dry weight, depending on the efficiency of water washing) and the beta-D-homopolyglucan nature of these pellicles were assessed by physical, chemical, and enzymatic methods. The apyrogenic bacterial biomass, a minor component of the dried biofilm (BioFill), is inactivated by ethylene dioxide. Once applied on exudating or bloody tissues, this biofilm displays several advantages as a biological dressing, and hence, it is valuable as a temporary skin substitute in the treatment of skin wounds, such as burns, ulcers, grafts, and as an adjuvant in dermal abrasions.


Subject(s)
Bandages , Biological Dressings , Cellulose/therapeutic use , Skin , Acetobacter/metabolism , Cellulose/biosynthesis , Humans , Microscopy, Electron, Scanning , X-Ray Diffraction
14.
Phys Rev B Condens Matter ; 38(7): 4580-4583, 1988 Sep 01.
Article in English | MEDLINE | ID: mdl-9946844
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