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1.
J Urol ; 170(5): 2091-4, 2003 Nov.
Article in English | MEDLINE | ID: mdl-14532860

ABSTRACT

PURPOSE: We assessed the effect of the vimentin amino terminal polypeptide (NT1) on barrier function of rabbit bladder epithelium. MATERIALS AND METHODS: The effect of NT1 on the properties of rabbit bladder epithelium were studied using Ussing chambers and electrophysiological methods. RESULTS: NT1 increased transepithelial conductance (Gt) in a voltage dependent manner. At a transepithelial voltage (Vt) of -70 mV (serosal solution ground) the addition of NT1 to mucosal solution did not result in a change in Gt. When Vt was clamped to 0 mV, there was a time dependent increase in Gt. The increase in Gt was reversed by clamping Vt back to -70 mV or by removing NT1 from the mucosal bath at 0 mV. The polypeptide acts primarily at the apical membrane with a conductance increase that is concentration dependent. Induced conductance is nonselective for small monovalent cations and anions. The ability of NT1 to increase membrane conductance was decreased in the presence of bath calcium. CONCLUSIONS: The data suggest that the amino terminus of vimentin can interact with the plasma membrane of bladder epithelium and increase ion permeability in a voltage dependent manner.


Subject(s)
Cell Membrane Permeability/drug effects , Peptide Fragments/pharmacology , Urinary Bladder/drug effects , Urothelium/drug effects , Vimentin/pharmacology , Animals , Calcium/pharmacology , Culture Techniques , Male , Membrane Potentials/drug effects , Patch-Clamp Techniques , Rabbits
2.
Protoplasma ; 221(3-4): 277-88, 2003 Jun.
Article in English | MEDLINE | ID: mdl-12802635

ABSTRACT

10 nm diameter filaments were observed in whole-mount preparations of algae of diverse phyla: Acetabularia acetabulum and A. major (Chlorophyta), Chara australis and Nitella flexilis (Charophyta), and Poterioochromonas malhamensis (Chrysophyta). A polyclonal antibody raised against a basic, 50 kDa DNA-binding protein of A. acetabulum stains the filaments of A. acetabulumand and A. major as well as of C. australis and N. flexilis. While in the perinuclear region of A. acetabulumand and A. major and throughout the cytoplasm of P. malhamensis the 10 nm filaments have a smooth appearance, in the stalk of A. acetabulumand and A. major they are densely covered by globular structures; in C. australis and N. flexilis they are less frequently associated with such material. The morphology of a part of the globular particles is quite reminiscent of prosomes. A monoclonal antibody elicited against prosomes isolated from A. acetabulum indeed decorates the globular particles on the A. acetabulum and A. major filaments. The possible role of these filament-particle associations is discussed.


Subject(s)
Characeae/cytology , Chlorophyta/cytology , Chrysophyta/cytology , Cysteine Endopeptidases , Cytoskeleton/physiology , Multienzyme Complexes , Cytoplasm/ultrastructure , Fluorescent Antibody Technique , Proteasome Endopeptidase Complex , Species Specificity
3.
DNA Cell Biol ; 20(9): 509-29, 2001 Sep.
Article in English | MEDLINE | ID: mdl-11747604

ABSTRACT

Because knockout of the vimentin gene in mice did not produce an immediately obvious, overt, or lethal specific phenotype, the conjecture was made that the mutation affects some subtle cellular functions whose loss manifests itself only when the mutant animals are exposed to stress. In order to substantiate this idea in a tractable in vitro system, primary embryo fibroblasts from wildtype (V(+/+)) and vimentin-knockout (V(-/-)) mice were compared with regard to their growth behavior under the pseudophysiologic conditions of conventional cell culture. Whereas in the course of serial transfer, the V(+/+) fibroblasts progressively reduced their growth potential, passed through a growth minimum around passage 12 (crisis), and, as immortalized cells, resumed faster growth, the V(-/-) fibroblasts also cut down their growth rate but much earlier, and they either did not immortalize or did so at an almost undetectable rate. Cells withdrawing from the cell cycle showed increased concentrations of reactive oxygen species and signs of oxidative damage: enlarged and flattened morphology, large nuclear volume, reinforced stress fiber system as a result of increased contents of actin and associated proteins, prominent extracellular matrix, and perinuclear masses of pathological forms of mitochondria with low membrane potential. The differences in the cell cycle behavior of the V(+/+) and V(-/-) cells in conjunction with the morphologic changes observed in mitotically arrested cells suggests a protective function of vimentin against oxidative cell damage. Because vimentin exhibits affinity for and forms crosslinkage products with recombinogenic nuclear as well as mitochondrial DNA in intact cells, it is credible to postulate that vimentin plays a role in the recombinogenic repair of oxidative damage inflicted on the nuclear and mitochondrial genome throughout the cells' replicative lifespan. Recombinational events mediated by vimentin also appear to take place when the cells pass through the genetically unstable state of crisis to attain immortality. The residual immortalization potential of V(-/-) fibroblasts might be attributable to their capacity to synthesize, in place of vimentin, the tetrameric form of a lacZ fusion protein carrying, in addition to a nuclear localization signal, the N-terminal 59 amino acids of vimentin and thus its DNA-binding site. On the basis of these results and considerations, a major biologic role of vimentin may be to protect animals during development and postnatal life against genetic damage and, because of its contribution to the plasticity of the genome, to allow them to respond to environmental challenges.


Subject(s)
Cell Transformation, Neoplastic , Cellular Senescence , Fibroblasts/pathology , Vimentin/physiology , Animals , Cell Division , Cells, Cultured , Cytoskeleton/pathology , Cytoskeleton/physiology , Embryo, Mammalian , Fibroblasts/physiology , Mice , Mice, Knockout , Mitochondria/pathology , Mitochondria/physiology , Oxidative Stress
4.
DNA Cell Biol ; 20(9): 531-54, 2001 Sep.
Article in English | MEDLINE | ID: mdl-11747605

ABSTRACT

Crosslinkage of vimentin to DNA in mouse L929 cells by formaldehyde and isolation of SDS-stable DNA-vimentin complexes from normal L929 cells and mouse and human embryo fibroblasts indicated close spatial relations between these components in the intact cell. The adducts, obtained by immunoprecipitation with anti-vimentin antibody, contained substantial quantities, not only of repetitive and mobile sequence elements such as centromeric satellite DNA, telomere DNA, microsatellites and minisatellites, long and short interspersed nucleotide elements, and retroposons, but also of mitochondrial (mt) DNA. Because the SDS-stable complexes could be isolated with distinctly higher yields from oxidatively stressed, senescent fibroblasts and were dissociated by boiling, they possibly arose from accidental condensation reactions mediated by unsaturated and dialdehydes, products of free radical-induced lipid peroxidation. They can therefore be considered vestiges of a general interaction of vimentin with cellular DNA. The sequence patterns of their DNA fragments were similar to those of extrachromosomal circular and linear DNA, including retroviral elements, markers and enhancers of genomic instability that also occur in the cytoplasm and are able to transport vimentin into the nucleus. Many of the fragments were also remarkably similar to AT-rich nuclear matrix attachment regions (MARs) in that they contained, in addition to various mobile elements, a palette of typical MAR motifs. With its tendency to multimerize and to interact with single-stranded and supercoiled DNA, vimentin thus behaves like a nuclear matrix protein and may as such participate in a variety of nuclear matrix-associated processes such as replication, recombination, repair, and transcription of DNA. These activities seem to be extendible to the mitochondrial compartment, as vimentin was also crosslinked to mtDNA, preferentially to its D-loop and hypervariable main control region. These sites are prone to point and deletion mutations and, like nuclear MARs, are associated with the cyto-karyomatrix. Moreover, as a developmentally regulated and tissue-specific cyto-karyomatrix protein, vimentin may contribute to the organization of chromatin, including centromeric and telomeric heterochromatin at the nuclear periphery, with all its consequences for genomic activities during embryogenesis and in adulthood of vertebrates. However, because of its high affinity for hypervariable, recombinogenic DNA sequences, vimentin is proposed to play a major role in both the preservation and the evolution of the nuclear and mitochondrial genome.


Subject(s)
DNA, Mitochondrial/metabolism , DNA/metabolism , Vimentin/metabolism , Animals , Base Sequence , Cells, Cultured , Cross-Linking Reagents , DNA/genetics , DNA, Complementary/analysis , DNA, Complementary/genetics , DNA, Mitochondrial/genetics , Embryo, Mammalian , Fibroblasts , Humans , Interspersed Repetitive Sequences , Mice , Molecular Sequence Data , Nuclear Matrix/metabolism , Protein Binding , Sodium Dodecyl Sulfate , Vimentin/genetics
5.
Biochemistry ; 40(34): 10342-9, 2001 Aug 28.
Article in English | MEDLINE | ID: mdl-11513613

ABSTRACT

A combination of enzymatic and chemical ladder sequencing of photo-cross-linked protein-single-stranded oligodeoxyribonucleotide complexes and analysis by MALDI-TOF mass spectrometry was employed to identify the amino acid residues responsible for the stable binding of nucleic acids in several intermediate filament (IF) subunit proteins. The IF proteins studied included the type I and type II cytokeratins K8, K18, and K19; the type III proteins desmin, glial fibrillary acidic protein (GFAP), peripherin, and vimentin; and the type IV neurofilament triplet protein L (NF-L). The site of nucleic acid binding was localized to the non-alpha-helical, amino-terminal head domain of all of the IF proteins tested. GFAP, which has the shortest head domain of the proteins tested, cross-linked via only two amino acid residues. One of these residues was located within a conserved nonapeptide domain that has been shown to be required for filament formation. One or more cross-linked residues were found in a similar location in the other proteins studied. The major binding site for nucleic acids for most of the proteins appears to be localized within the middle of the head domain. The two exceptions to this generalization are GFAP, which lacks these residues, and NF-L, in which a large number of cross-linked residues were found scattered throughout the first half of the head domain. Control experiments were also done with two bacteriophage ssDNA-binding proteins, as well as actin and tubulin. The single sites of cross-linkage observed with the bacteriophage proteins, Phe(183) for the T4 gene 32 protein and Phe(73) for the M13 gene 5 protein, were in good agreement with literature data. Actin and tubulin could not be cross-linked to the oligonucleotide. Aside from the insight into the biological activity of IF proteins that these data provide, they also demonstrate that this analytical method can be employed to study a variety of protein-nucleic acid interactions.


Subject(s)
DNA/metabolism , Intermediate Filament Proteins/chemistry , Intermediate Filament Proteins/metabolism , Membrane Glycoproteins , Oligodeoxyribonucleotides/chemistry , Oligodeoxyribonucleotides/metabolism , Amino Acid Sequence , Animals , Binding Sites , Desmin/chemistry , Desmin/metabolism , Glial Fibrillary Acidic Protein/chemistry , Glial Fibrillary Acidic Protein/metabolism , Humans , Keratins/chemistry , Keratins/metabolism , Mice , Molecular Sequence Data , Nerve Tissue Proteins/chemistry , Nerve Tissue Proteins/metabolism , Neurofilament Proteins/chemistry , Neurofilament Proteins/metabolism , Peripherins , Protein Structure, Secondary , Protein Subunits , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization , Swine , Vimentin/chemistry , Vimentin/metabolism
6.
Appl Microbiol Biotechnol ; 55(2): 198-204, 2001 Mar.
Article in English | MEDLINE | ID: mdl-11330714

ABSTRACT

Pseudomonas lipases are industrially used as detergent additives, in the food industry, and in organic synthesis. Currently, these lipases are either isolated from wild-type strains or overexpressed in recombinant Pseudomonas host strains which may be subject to special safety regulations and thus be unsuitable for enzyme engineering via directed evolution. Here we describe the heterologous expression of two Pseudomonas lipases in Escherichia coli. The lipase genes of Pseudomonas sp. KWI 56 (recently reclassified as Burkholderia cepacia) and Chromobacterium viscosum and the genes of their specific chaperones, which are required for correct folding, were synthesized with an optimized nucleotide sequence and overexpressed (up to 50%) in E. coli. However, both lipases were inactively expressed inside inclusion bodies. Quantitative in vitro refolding of the lipases in the presence of their specific chaperones yielded 310,000 U/g (Pseudomonas sp. KWI 56) and 190,000 U/g (C. viscosum) wet cells. In addition, these lipases could be demonstrated to refold efficiently in the presence of chaperones of related lipases.


Subject(s)
Chromobacterium/genetics , Escherichia coli/genetics , Lipase/genetics , Molecular Chaperones/genetics , Protein Folding , Pseudomonas/genetics , Burkholderia cepacia/genetics , Chromobacterium/enzymology , Chromobacterium/metabolism , DNA, Recombinant , Escherichia coli/metabolism , Gene Expression , Genes, Bacterial , Genes, Synthetic , Lipase/biosynthesis , Lipase/chemistry , Molecular Chaperones/biosynthesis , Molecular Chaperones/metabolism , Pseudomonas/enzymology , Pseudomonas/metabolism , Recombinant Proteins/biosynthesis , Recombinant Proteins/chemistry
7.
Mol Biol Cell ; 12(1): 143-54, 2001 Jan.
Article in English | MEDLINE | ID: mdl-11160829

ABSTRACT

Electron microscopy of human skin fibroblasts syringe-loaded with human immunodeficiency virus type 1 protease (HIV-1 PR) revealed several effects on nuclear architecture. The most dramatic is a change from a spherical nuclear morphology to one with multiple lobes or deep invaginations. The nuclear matrix collapses or remains only as a peripheral rudiment, with individual elements thicker than in control cells. Chromatin organization and distribution is also perturbed. Attempts to identify a major nuclear protein whose cleavage by the protease might be responsible for these alterations were unsuccessful. Similar changes were observed in SW 13 T3 M [vimentin(+)] cells, whereas no changes were observed in SW 13 [vimentin(-)] cells after microinjection of protease. Treatment of SW 13 [vimentin(-)] cells, preinjected with vimentin to establish an intermediate filament network, with HIV-1 PR resulted in alterations in chromatin staining and distribution, but not in nuclear shape. These same changes were produced in SW 13 [vimentin(-)] cells after the injection of a mixture of vimentin peptides, produced by the cleavage of vimentin to completion by HIV-1 PR in vitro. Similar experiments with 16 purified peptides derived from wild-type or mutant vimentin proteins and five synthetic peptides demonstrated that exclusively N-terminal peptides were capable of altering chromatin distribution. Furthermore, two separate regions of the N-terminal head domain are primarily responsible for perturbing nuclear architecture. The ability of HIV-1 to affect nuclear organization via the liberation of vimentin peptides may play an important role in HIV-1-associated cytopathogenesis and carcinogenesis.


Subject(s)
Cell Nucleus/drug effects , Cells, Cultured/virology , HIV Protease/metabolism , Vimentin/pharmacology , Animals , Cell Nucleus/pathology , Cell Nucleus/ultrastructure , Cells, Cultured/drug effects , Cells, Cultured/ultrastructure , Chromatin/drug effects , Chromatin/ultrastructure , Culture Techniques , HIV Protease/pharmacology , Humans , Mice , Microinjections , Microscopy, Confocal , Peptides/chemical synthesis , Peptides/pharmacology , Protein Structure, Tertiary , Vimentin/chemistry , Vimentin/metabolism
8.
Neurochem Int ; 38(5): 373-83, 2001 Apr.
Article in English | MEDLINE | ID: mdl-11222917

ABSTRACT

A number of similarities between astrocytes and hepatic stellate cells (HSC) rose the question whether or not the protective barrier features of blood-tissue interface may be provided by HSC as well. To test this hypothesis, we investigated the presence of metallothionein (MT), a functional marker of blood--brain barrier, in HSC in situ and in cell culture and compared the results with those obtained with astrocytes. The dynamics of MT expression in cultured astrocytes and HSC was investigated by simultaneous labelling of the cells with a monoclonal antibody (MAb MT) against a lysine-containing epitope of the cadmium-induced monomer of MT-I from rat liver and antiserum against glial fibrillary acidic protein (GFAP). Cell activation was estimated by the presence of smooth muscle alpha-actin (SMAA). In immunoblotting, MAb MT recognized monomeric MT protein and proteins in the 30-kDa range; both bands were pronounced in brain and barely visible in liver homogenates. In situ, MAb MT reacted with very few perivascular cells situated in the parenchyma of the liver. Double immunolabelling of brain slices with MAb MT and antiserum against GFAP showed large areas of brain containing cells expressing both MT and GFAP. However, there were also regions in the brain where the cells produced solely GFAP or MT. In liver cell culture, MT was absent from HSC and hepatocytes in early periods of cultivation, during which the cells maintained their original features; however, MT was expressed strongly in HSC during their activation under prolonged culture conditions. Inversely, in astrocytes MT was expressed during early culturing and disappeared from the cells together with SMAA in late culture when GFAP was upregulated. These results suggest that the acquisition of myofibroblastic features by perivascular cells empowers them to establish a protective blood-tissue permeability barrier. In addition, this study shows that, at least in cell culture, an enrichment of perivascular cells in GFAP results in the disappearance of protective functions.


Subject(s)
Astrocytes/metabolism , Glial Fibrillary Acidic Protein/metabolism , Liver/metabolism , Metallothionein/metabolism , Animals , Biological Transport , Blotting, Western , Cells, Cultured , Electrophoresis, Polyacrylamide Gel , Liver/cytology , Mice , Phenotype , Rats
9.
DNA Cell Biol ; 19(11): 647-77, 2000 Nov.
Article in English | MEDLINE | ID: mdl-11098216

ABSTRACT

Employing the whole-genome PCR technique, intermediate filaments (IFs) reconstituted from vimentin, desmin, and glial fibrillary acidic protein were shown to select repetitive and mobile DNA sequence elements from a mixture of mouse genomic DNA fragments. The bound fragments included major and minor satellite DNA, telomere DNA, minisatellites, microsatellites, short and long interspersed nucleotide elements (SINEs and LINEs), A-type particle elements, members of the mammalian retrotransposon-like (MaLR) family, and a series of repeats not assignable to major repetitive DNA families. The latter sequences were either similar to flanking regions of genes; possessed recombinogenic elements such as polypurine/polypyrimidine stretches, GT-rich arrays, or GGNNGG signals; or were characterized by the distribution of oligopurine and pyrimidine motifs whose sequential and vertical alignment resulted in patterns indicative of high recombination potentials of the respective sequences. The different IF species exhibited distinct quantitative differences in DNA selectivities. Complexes consisting of vimentin IFs and DNA fragments containing LINE, (GT)(n) microsatellite, and major satellite DNA sequences were saturable and dynamic and were formed with high efficiency only when the DNAs were partially denatured. The major-groove binder methyl green exerted a stronger inhibitory effect on the binding reaction than did the minor-groove binder distamycin A; the effects of the two compounds were additive. In addition, DNA footprinting studies revealed significant configurational changes in the DNA fragments on interaction with vimentin IFs. In the case of major satellite DNA, vimentin IFs provided protection of the T-rich strand from cleavage by DNase I, whereas the A-rich strand was totally degraded. Taken together, these observations suggest that IF protein(s) bind to double-stranded DNAs at existing single-stranded sites and, taking advantage of their helix-destabilizing potential, further unwind them via a cooperative effort of their N-terminal DNA-binding regions. A comparison of the present results with literature data, as well as a search in the NCBI database, showed that IF proteins are related to nuclear matrix attachment region (MAR)-binding proteins, and the DNA sequences they interact with are very similar or even identical to those involved in a plethora of DNA recombination and related repair events. On the basis of these comparisons, IF proteins are proposed to contribute in a global fashion, not only to genetic diversity, but also to genomic integrity, in addition to their role in gene expression.


Subject(s)
DNA Transposable Elements , DNA/metabolism , Intermediate Filaments/metabolism , Repetitive Sequences, Nucleic Acid , Animals , Base Sequence , Binding, Competitive/drug effects , Cell Line , DNA/chemistry , DNA/genetics , DNA Footprinting , Desmin/metabolism , Distamycins/pharmacology , Glial Fibrillary Acidic Protein/metabolism , Kinetics , Methyl Green/pharmacology , Mice , Microsatellite Repeats/genetics , Molecular Sequence Data , Oligonucleotides/genetics , Oligonucleotides/metabolism , Protein Binding/drug effects , Sequence Homology, Nucleic Acid , Vimentin/metabolism
10.
Biochim Biophys Acta ; 1493(1-2): 170-9, 2000 Sep 07.
Article in English | MEDLINE | ID: mdl-10978519

ABSTRACT

In mouse plasmacytoma cells (MPC-11), an activation of the normally repressed vimentin gene was observed as a response to transfectional stress. Effects of electroporation on vimentin gene expression were compared at the cellular and chromatin level to those caused by treatment with 12-O-tetradecanoylphorbol-13-acetate (TPA). At the cellular level, similar changes in vimentin gene activity and cell-cycle distribution were observed by flow cytometry, whereas at the chromatin level similar changes in patterns of hypersensitive regions were detected by DNase I mapping. Additionally, a region located 700 bp upstream of the transcriptional start became hypersensitive to DNase I digestion upon electroporation and TPA treatment. This region overlaps two adjacent AP-1-like binding elements and generates specific DNA/AP-1 complexes in bandshift experiments. Therefore, the transcription factor AP-1 seems to play a central role in the activation of vimentin gene expression induced by these 2 different forms of stress.


Subject(s)
Transcription Factor AP-1/metabolism , Vimentin/metabolism , Animals , Base Sequence , Binding Sites , Cloning, Molecular , Deoxyribonuclease I , Electroporation , Flow Cytometry , Gene Expression Regulation , Genes, Reporter , Mice , Plasmacytoma , Plasmids , Restriction Mapping , Tetradecanoylphorbol Acetate , Transcription Factors , Tumor Cells, Cultured , Up-Regulation , Vimentin/biosynthesis , Vimentin/genetics
11.
Biochemistry ; 39(22): 6645-51, 2000 Jun 06.
Article in English | MEDLINE | ID: mdl-10828982

ABSTRACT

The amino acid residues responsible for stable binding of nucleic acids by the intermediate filament (IF) subunit protein vimentin were identified by a combination of enyzmatic and chemical ladder sequencing of photo-cross-linked vimentin-oligodeoxyribonucleotide complexes and analysis by MALDI-TOF mass spectrometry. Three tryptic peptides of vimentin (vim(28)(-)(35), vim(36)(-)(49), and vim(50)(-)(63)) were found to be cross-linked to oligo(dG.BrdU)(12). dG.3'-FITC. From a methodological standpoint, it was necessary to remove the bulk of the bound oligonucleotide by digestion with nuclease P1 to get reproducible spectra for most of the peptides studied. Additionally, removal of the phosphate group of the residually bound dUMP or modification of the amino terminus of the peptide-oligonucleotide complexes with dimethylaminoazobenzene isothiocyanate dramatically improved the quality of the MALDI-TOF spectra obtained, particularly for the vim(28)(-)(35) peptide. A single Tyr residue within each of these peptides (Tyr(29), Tyr(37), and Tyr(52)) was unequivocally demonstrated to be the unique site of cross-linking in each peptide. These three Tyr residues are contained within the two beta-ladder DNA-binding wings proposed for the middle of the vimentin non-alpha-helical head domain. The experimental approach described should be generally applicable to the study of protein-nucleic acid interactions and is currently being employed to characterize the DNA-binding sites of several other IF subunit proteins.


Subject(s)
DNA-Binding Proteins/chemistry , DNA/metabolism , Vimentin/chemistry , Amino Acid Sequence , Animals , Binding Sites , Cross-Linking Reagents , Intermediate Filament Proteins/chemistry , Mice , Molecular Sequence Data , Oligodeoxyribonucleotides/chemistry , Peptide Fragments/chemistry , Protein Binding , Protein Structure, Secondary , Sequence Analysis, Protein , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization/methods
12.
J Cell Sci ; 113 ( Pt 3): 483-91, 2000 Feb.
Article in English | MEDLINE | ID: mdl-10639335

ABSTRACT

Plectin, the largest and most versatile member of the cytolinker/plakin family of proteins characterized to date, has a tripartite structure comprising a central 200 nm-long (&agr;)-helical rod domain flanked by large globular domains. The C-terminal domain comprises a short tail region preceded by six highly conserved repeats (each 28-39 kDa), one of which (repeat 5) contains plectin's intermediate filament (IF)-binding site. We used recombinant and native proteins to assess the effects of plectin repeat 5-binding to IF proteins of different types. Quantitative Eu(3+)-based overlay assays showed that plectin's repeat 5 domain bound to type III IF proteins (vimentin) with preference over type I and II cytokeratins 5 and 14. The ability of both types of IF proteins to self-assemble into filaments in vitro was impaired by plectin's repeat 5 domain in a concentration-dependent manner, as revealed by negative staining and rotary shadowing electron microscopy. This effect was much more pronounced in the case of vimentin compared to cytokeratins 5/14. Preassembled filaments of both types became more and more crosslinked upon incubation with increasing concentrations of plectin repeat 5. However, at high proportions of plectin to IF proteins, disassembly of filaments occurred. Again, vimentin filaments proved considerably more sensitive towards disassembly than those composed of cytokeratins 5 and 14. In general, IFs formed from recombinant proteins were found to be slightly more responsive towards plectin influences than their native counterparts. A dose-dependent plectin-inflicted collapse and putative disruption of IFs was also observed in vivo after ectopic expression of vimentin and plectin's repeat 5 domain in cotransfected vimentin-deficient SW13 (vim(-)) cells. Our results suggest an involvement of plectin not only in crosslinking and stabilization of cytoskeletal IF networks, but also in regulation of their dynamics.


Subject(s)
Intermediate Filament Proteins/metabolism , Intermediate Filaments/metabolism , Keratins/metabolism , Vimentin/metabolism , Animals , Binding Sites , Binding, Competitive , Dose-Response Relationship, Drug , Glioma/pathology , Intermediate Filament Proteins/chemistry , Intermediate Filaments/ultrastructure , Keratins/chemistry , Mice , Morphogenesis , Negative Staining , Neoplasm Proteins/metabolism , Plectin , Protein Binding , Protein Structure, Tertiary , Rats , Recombinant Fusion Proteins/metabolism , Transfection , Tumor Cells, Cultured
13.
Biochemistry ; 38(51): 16802-9, 1999 Dec 21.
Article in English | MEDLINE | ID: mdl-10606512

ABSTRACT

Employing deletion mutant proteins and fluorescein-labeled oligodeoxyribonucleotides in a fluorescence polarization assay, the nucleic acid binding site of the intermediate filament (IF) subunit protein vimentin was localized to the middle of the arginine-rich, non-alpha-helical, N-terminal head domain. While deletion of the first few N-terminal residues (up to amino acid 17) had almost no effect, deletions of residues 25-64 or 25-68 essentially abolished the binding of nucleic acids by the respective proteins. Proteins with smaller deletions, of residues 25-39 or 43-68, were still able to bind nucleic acids quite well at low ionic strength, but only the proteins containing the first DNA-binding wing (residues 27-39) retained the ability to stably bind nucleic acids at physiological ionic strength. These results were confirmed by data obtained with two synthetic peptides whose sequences correspond to the smaller deletions. Nitration experiments showed that one or more of the tyrosines in the head domain are responsible for the stable binding by intercalation. Interestingly, the residues responsible for binding nucleic acids can be deleted without major influence on the in vivo polymerization properties of the mutant proteins. Only the protein with the largest internal deletion, of residues 25-68, failed to form filaments in vivo. Since the N-terminal head domains of IF proteins are largely exposed on the filament surface, but nevertheless essential for filament assembly, these results support the model that the middle of the head domain of vimentin may loop out from the filament surface and thus be available for interactions with other cellular structures or molecules.


Subject(s)
Nucleic Acids/chemistry , Nucleic Acids/metabolism , Vimentin/chemistry , Vimentin/metabolism , Amino Acid Sequence , Amino Acid Substitution/genetics , Animals , Fluorescence Polarization , Humans , Mice , Microinjections , Molecular Sequence Data , Nucleic Acids/genetics , Oligodeoxyribonucleotides/chemistry , Oligodeoxyribonucleotides/genetics , Oligodeoxyribonucleotides/metabolism , Peptide Fragments/genetics , Peptide Fragments/isolation & purification , Protein Binding/genetics , Protein Structure, Tertiary/genetics , Sequence Deletion , Transfection , Tumor Cells, Cultured , Vimentin/deficiency , Vimentin/genetics
14.
Neurochem Int ; 35(4): 317-27, 1999 Oct.
Article in English | MEDLINE | ID: mdl-10482352

ABSTRACT

Double-immunolabelling techniques were employed to investigate the distribution of smooth muscle alpha-actin (actin) in glial fibrillary acidic protein (GFAP)-positive cells in rat brain during early postnatal development and maturation and in glial primary culture derived from newborn rat brain. In addition the expression of desmin was studied in the glial primary cultures as a function of the differentiation of the cells. Comparison of the cultured astroglial cells at an early age with hepatic stellate cells derived from CCl4-induced cirrhotic rat liver, revealed features of the astrocytic cytoskeleton characteristic of myofibroblastic cells, i.e., strong expression of both myofibroblastic markers, actin and desmin. In astroglial cells with an initial morphology reminiscent of fibroblasts the non-filamentous perinuclear immunoreaction of GFAP increased with time at the expense of actin and, partially, desmin. GFAP filaments were spread throughout the cytoplasm of the cells which acquired stellate morphology. The alterations in the morphology of the cells and the distribution and intensity of staining for GFAP and actin during the differentiation of astrocytes in culture were similar to those observed in astrocytes during the maturation of the brain. In astrocytes from a newborn brain as well as in cirrhotic hepatic stellate cells, the area of immunoreaction of GFAP was reduced and confined mainly to the nuclear region. In contrast, the cells expressed actin throughout the cytoplasm. These findings may hint at a similar function of these regionally specialized perivascular myofibroblastic cells in a normal brain and diseased liver and at inverse organ-specific functions which the cells fulfill under non-pathological conditions in vivo.


Subject(s)
Astrocytes/cytology , Liver Cirrhosis, Experimental/pathology , Actins/metabolism , Animals , Animals, Newborn , Astrocytes/metabolism , Cells, Cultured , Desmin/metabolism , Fibroblasts/metabolism , Glial Fibrillary Acidic Protein/metabolism , Immunohistochemistry , Liver Cirrhosis, Experimental/metabolism , Male , Muscles/metabolism , Rats , Rats, Sprague-Dawley
15.
Proc Natl Acad Sci U S A ; 96(6): 2794-9, 1999 Mar 16.
Article in English | MEDLINE | ID: mdl-10077590

ABSTRACT

Opitz syndrome (OS) is a genetically heterogeneous disorder characterized by defects of the ventral midline, including hypertelorism, cleft lip and palate, heart defects, and mental retardation. We recently identified the gene responsible for X-linked OS. The ubiquitously expressed gene product, MID1, is a member of the RING finger family. These proteins are characterized by an N-terminal tripartite protein-protein interaction domain and a conserved C terminus of unknown function. Unlike other RING finger proteins for which diverse cellular functions have been proposed, the function of MID1 is as yet undefined. By using the green fluorescent protein as a tag, we show here that MID1 is a microtubule-associated protein that influences microtubule dynamics in MID1-overexpressing cells. We confirm this observation by demonstrating a colocalization of MID1 and tubulin in subcellular fractions and the association of endogenous MID1 with microtubules after in vitro assembly. Furthermore, overexpressed MID1 proteins harboring mutations described in OS patients lack the capability to associate with microtubules, forming cytoplasmic clumps instead. These data give an idea of the possible molecular pathomechanism underlying the OS phenotype.


Subject(s)
Microtubule Proteins/metabolism , Microtubules/metabolism , Nuclear Proteins , Transcription Factors/metabolism , DNA Mutational Analysis , Fluorescent Antibody Technique , HeLa Cells , Humans , Microtubule Proteins/genetics , Mutation , Smith-Lemli-Opitz Syndrome/genetics , Transcription Factors/genetics , Tubulin/metabolism , Ubiquitin-Protein Ligases
16.
Biol Cell ; 91(9): 675-84, 1999 Dec.
Article in English | MEDLINE | ID: mdl-10668098

ABSTRACT

Glial fibrillary acidic protein (GFAP) has recently been shown to be expressed in the glomerular podocytes and mesangial cells (MC) of kidney (Buniatian et al (1998) Biol Cell 90, 53-61). The different localization of GFAP in podocytes and MC has raised the question whether this might reflect specific cellular functions. To address this question, in the present study podocytes and MC in early (2, 3 day-old), prolonged (5, 7 day-old) and late (14, 21 day-old) primary cultures from out-growths of glomerular explants were used. Double-immunolabeling studies demonstrated that podocytes transiently acquire myofibroblastic features, characterized by the expression of smooth muscle alpha-actin (SMAA) and increased perinuclear reaction of GFAP in prolonged cultures. The morphological differentiation of cobblestone-like podocytes into process-bearing cells was followed by loss of the myofibroblastic marker, SMAA, de novo expression of desmin, and distribution of GFAP, vimentin and desmin into the processes. In late culture, GFAP and SMAA were nearly absent from the podocytes which maintained the cobblestone-like morphology. By contrast, the myofibroblastic features gained by MC during prolonged culturing increased with time. A myofibroblast-like cytoskeleton of podocytes and MC similar to that of healthy astrocytes suggest an increased spectrum of functional activities of these cells during the acquisition of myofibroblastic features. In addition, the present study provides a new combination of biochemical and biological features by which podocytes and MC can be distinguished in culture.


Subject(s)
Glial Fibrillary Acidic Protein/metabolism , Glomerular Mesangium/chemistry , Glomerular Mesangium/cytology , Kidney Glomerulus/chemistry , Kidney Glomerulus/cytology , Actins/analysis , Actins/metabolism , Animals , Biomarkers/analysis , Cell Culture Techniques , Cytoskeletal Proteins/metabolism , Muscle, Smooth/chemistry , Rats , Rats, Sprague-Dawley , Time Factors , Tissue Distribution
17.
Biol Cell ; 90(5): 407-26, 1998 Sep.
Article in English | MEDLINE | ID: mdl-9835015

ABSTRACT

The objective of this investigation was to characterize intranuclear accumulation of oligonucleotides and their adducts with non-karyophilic compounds in cultured animal cells and thus to present a model system for nucleic acid-mediated nuclear import. In digitonin-permeabilized cells, nuclear uptake of 3'-FITC-labeled, single-stranded 25-mer oligodeoxyribonucleotides was independent of added cytosolic protein, largely energy-dependent, inhibitable by wheat germ agglutinin but not by N-ethylmaleimide, and a function of their base composition. When coupled to FITC-labeled streptavidin or streptavidin-bovine serum albumin conjugates, the oligonucleotides delivered the proteins to the nuclear interior with rates roughly proportional to their karyophilicity as free molecules. Transport activity was also demonstrated for single-stranded oligoribonucleotides. The transport was energy-dependent, inhibited by GMP-PNP and wheat germ agglutinin, but unaffected by N-ethylmaleimide. Nuclear import of oligo(dG)25/protein adducts needed 3 to 4 oligonucleotide signals per complex and the signal had to be at least 15 nucleotides long. Micro-injection experiments showed that the results obtained with digitonin-permeabilized cells are not artifacts of a quasi-intact cellular system. These data were confirmed by electron microscopy employing complexes of oligodeoxyribonucleotides with streptavidin-peroxidase-bovine serum albumin-1 nm gold. In permeabilized cells, the complexes docked to the cytoplasmic face of the nuclear pore complexes, were translocated through the central pore channel and accumulated in large quantities in the nuclear baskets before they were released into the nucleoplasm. These results demonstrate that nuclear uptake of oligonucleotides and their complexes is an active process mediated by nuclear pore complexes, which, at least regarding its cytoplasmic component, is different from the pathway requiring classical nuclear localization signals.


Subject(s)
Cell Nucleus/metabolism , Oligodeoxyribonucleotides/metabolism , Proteins/metabolism , Animals , Biological Transport, Active/drug effects , Cell Membrane Permeability/drug effects , Cells, Cultured , DNA, Single-Stranded/metabolism , Digitonin/pharmacology , Ethylmaleimide/pharmacology , Fibroblasts/drug effects , Fibroblasts/metabolism , Fluorescein-5-isothiocyanate/analogs & derivatives , Guanylyl Imidodiphosphate/pharmacology , Humans , Macropodidae , Mice , Microinjections , Microscopy, Confocal , Nuclear Envelope/metabolism , Serum Albumin, Bovine , Streptavidin , Wheat Germ Agglutinins/pharmacology
18.
Biol Cell ; 90(4): 319-37, 1998 Jul.
Article in English | MEDLINE | ID: mdl-9800350

ABSTRACT

Previous experiments have revealed a relatively weak electrostatic binding capacity of in vitro reconstituted intermediate filaments (IFs) as well as of natural IFs of whole cell mount preparations for purified ribosomal particles of mammalian origin. In order to demonstrate that such associations also occur in vivo, intact cells were subjected to double immunofluorescence microscopy using antibodies directed against vimentin and ribosomal protein S17. Since in proliferating cells the majority of the ribosomal particles are assembled into polyribosomes and these are to a great extent associated with microfilaments, in vitro cultured mouse embryo skin fibroblasts (MSF cells) were treated with puromycin to allow the formation of single ribosomes. Employing confocal laser scanning microscopy, the ribosomes were detected in colocalization with vimentin IFs. Disassembly of polyribosomes was also achieved by serum starvation of cultured cells. In this case, MSF cells of a low passage attained an extended and flattened appearance with the vimentin IFs being directly associated with the cell nuclei, radiating into the peripheral areas of the cells or showing a stress fiber-like distribution. In both cases, considerable quantities of ribosomal material were seen in close neighborhood to vimentin IFs. Frequently, these ribosome-IF associations were coaligned with microtubules and they also surrounded myosin I-decorated stress fibers. Double labeling with the vital, RNA-specific fluorochrome SYTO 14 produced a fluorescence pattern largely superimposable on that of ribosomal protein S17. Treatment of the starved cells with either demecolcine or cytochalasin D had an only moderately disturbing effect on vimentin IF distribution and the ribosomes stayed in contact with the vimentin IFs. On the basis of these results, it is conceivable that IFs play a role in the storage of ribonucleoprotein particles in general and non-translating ribosomes in particular in the cytoplasm of animal cells. In addition, the often seen coalignment of IFs with microtubules and microfilaments might serve facilitated and directional transport of ribonucleoprotein particles from the nucleus to peripheral areas of the cell.


Subject(s)
Intermediate Filaments/drug effects , Intermediate Filaments/ultrastructure , Puromycin/pharmacology , Ribosomes/drug effects , Ribosomes/ultrastructure , Actin Cytoskeleton/ultrastructure , Animals , Cells, Cultured , Culture Media, Serum-Free , Cytochalasin D/pharmacology , Demecolcine/pharmacology , Fibroblasts , Intermediate Filaments/metabolism , Mice , Microscopy, Confocal , Microscopy, Electron , Microscopy, Fluorescence , Microtubules/ultrastructure , Ribosomal Proteins/metabolism , Ribosomes/metabolism , Vimentin/metabolism
19.
J Cell Sci ; 111 ( Pt 24): 3573-84, 1998 Dec 18.
Article in English | MEDLINE | ID: mdl-9819349

ABSTRACT

A number of characteristic properties of intermediate filament (IF) proteins, such as nucleic acid-binding activity, affinity for histones and structural relatedness to transcription factors and nuclear matrix proteins, in conjunction with the tight association of IFs with the nucleus, suggest that these proteins might also fulfill nuclear functions in addition to their structure-organizing and -stabilizing activities in the cytoplasm. Yet, cytoplasmic IF proteins do not possess nuclear localization signals. In a search for carriers capable of transporting the IF protein vimentin into the nucleus, complexes of FITC-vimentin with various DNAs were microinjected into the cytoplasm of cultured cells and the intracellular distribution of the protein was followed by confocal laser scanning microscopy. The single-stranded oligodeoxyribonucleotides oligo(dG)25, oligo[d(GT)12G] and oligo[d(G3T2A)4G] proved to be excellent nuclear carriers for vimentin. However, in fibroblasts, fluorescence-labeled vimentin taken up by the nuclei remained undetectable with affinity-purified, polyclonal anti-vimentin antibody, whereas it was readily identifiable in the nuclei of microinjected epithelial cells in this way. Moreover, when FITC-vimentin was preinjected into fibroblasts and allowed to assemble into the endogenous vimentin filament system, it was still transferred into the nucleus by post-injected oligo(dG)25, although to a lesser extent. Superhelical circular DNAs, like pBR322, SV40 and mitochondrial DNA, were also characterized by considerable capacities for nuclear vimentin transport; these transport potentials were totally destroyed by relaxation or linearization of the DNA molecules. Nevertheless, certain linear double-stranded DNA molecules with a high affinity for vimentin IFs, such as repetitive telomere and centromere or mobile long interspersed repeat (LINE) DNA, could carry FITC-vimentin into the nucleus. This was also true for a 375 bp extrachromosomal linear DNA fragment which occurs in the cytoplasm of mouse tumor cells and which is capable of immortalizing human lymphocytes. On the basis of these results, it appears very likely that cellular and viral products of reverse transcription as well as other extrachromosomal DNAs, which are circular, superhelical and apparently shuttling between the cytoplasm and the nucleus (eccDNA), are constantly loaded with vimentin in vimentin-positive cells. Since such DNAs are considered as markers of genomic instability, it is conceivable that vimentin directly participates as an architectural, chromatin-modifying protein in recombinatorial processes set off by these DNAs in the nucleus.


Subject(s)
Cell Nucleus/metabolism , DNA/metabolism , Vimentin/metabolism , Animals , Biological Transport , Cats , Cells, Cultured , Chickens , Cricetinae , Cytoplasm/metabolism , Fluorescein-5-isothiocyanate/metabolism , Fluorescent Dyes/metabolism , Guinea Pigs , Humans , Intracellular Fluid/metabolism , Mice , Microinjections , Microscopy, Confocal , Oligodeoxyribonucleotides/metabolism , Protein Binding
20.
Biol Cell ; 90(1): 53-61, 1998 Jan.
Article in English | MEDLINE | ID: mdl-9691426

ABSTRACT

In this study the presence of glial fibrillary acidic protein (GFAP) in kidney is for the first time demonstrated in cryostat sections and cultures of isolated glomerular explants derived from rat kidneys. In double immunolabelling analysis of adult rat kidney sections using antiserum against GFAP and monoclonal antibody (mAb) against vimentin or desmin, the presence of immunoreactivity for GFAP could be observed in the glomerulus of the kidney and vascular cells situated in the peritubular space which expressed vimentin and desmin. Labelling of the sections with absorbed antiserum against GFAP completely abolished the staining in all these cells. The mAb against GFAP, clone GF12.24 which is known to label GFAP both in neural and non-neural cells, recognised its antigen only in the cells located in glomeruli. The investigations performed on early 2- or 3-day-old cultures from glomerular explants revealed different patterns of staining for GFAP in mesangial cells and podocytes: weak filamentous in mesangial cells and a strong non-filamentous perinuclear pattern in podocytes. Due to prominent perinuclear expression in podocytes GFAP may be considered as a marker of these cells. A different pattern of distribution of immunoreactivity for GFAP in podocytes and mesangial cells might be due to function-related posttranslational modifications of GFAP resulting in assembly or disassembly of GFAP filaments. The different pattern of staining for GFAP in the podocytes and mesangial cells, cells which exert a different influence on the capillaries of the glomeruli, suggests a role for GFAP in regulation of the tension and permeability of vascular walls. Previous investigations and present studies hint at GFAP as being a general marker of perivascular cells.


Subject(s)
Glial Fibrillary Acidic Protein/analysis , Kidney Glomerulus/chemistry , Animals , Antibodies, Monoclonal/immunology , Cells, Cultured , Desmin/analysis , Fluorescent Antibody Technique, Indirect , Glomerular Mesangium/chemistry , Glomerular Mesangium/ultrastructure , Kidney/blood supply , Kidney Glomerulus/cytology , Rats , Rats, Sprague-Dawley , Vimentin/analysis
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