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1.
Microb Pathog ; 192: 106680, 2024 Jul.
Article in English | MEDLINE | ID: mdl-38729380

ABSTRACT

Biocontrol of phytopathogens involving the use of bioactive compounds produced by lactic acid bacteria (LAB), is a promising approach to manage many diseases in agriculture. In this study, a lactic acid bacterium designated YB1 was isolated from fermented olives and selected for its antagonistic activity against Verticillium dahliae (V. dahliae) and Agrobacterium tumefaciens (A. tumefaciens). Based on the 16S rRNA gene nucleotide sequence analysis (1565 pb, accession number: OR714267), the new isolate YB1 bacterium was assigned as Leuconostoc mesenteroides YB1 (OR714267) strain. This bacterium produces an active peptide "bacteriocin" called BacYB1, which was purified in four steps. Matrix-assisted lasers desorption/ionization (MALDI) time-of-flight (TOF) mass spectrometry (MS) based approach was performed to identify and characterize BacYB1. The exact mass was 5470.75 Da, and the analysis of the N-terminal sequence (VTRASGASTPPGTASPFKTL) of BacYB1 revealed no significant similarity to currently available antimicrobial peptides. The BacYB1 displayed a bactericidal mode of action against A. tumefaciens. The potentiel role of BacYB1 to supress the growth of A. tumefaciens was confirmed by live-dead cells viability assay. In pot experiments, the biocontrol efficacy of BacYB1 against V. dahliae wilt on young olive trees was studied. The percentage of dead plants (PDP) and the final mean symptomes severity (FMS) of plants articifialy infected by V. dahliae and treated with the pre-purified peptide BacYB1 (preventive and curative treatments) were significantly inferior to untreated plants. Biochemical analysis of leaves of the plants has shown that polyophenols contents were highly detected in plants infected by V. dahliae and the highest contents of chlorophyl a, b and total chlorophyll were recorded in plants treated with the combination of BacYB1 with the biofertilisant Humivital. BacYB1 presents a promising alternative for the control of Verticillium wilt and crown gall diseases.


Subject(s)
Agrobacterium tumefaciens , Bacteriocins , Leuconostoc mesenteroides , Olea , Plant Diseases , RNA, Ribosomal, 16S , Agrobacterium tumefaciens/metabolism , Bacteriocins/pharmacology , Bacteriocins/metabolism , Olea/microbiology , Plant Diseases/microbiology , Plant Diseases/prevention & control , RNA, Ribosomal, 16S/genetics , Leuconostoc mesenteroides/metabolism , Leuconostoc mesenteroides/genetics , Biological Control Agents/metabolism , Biological Control Agents/pharmacology , Verticillium/drug effects , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization , Antibiosis , Phylogeny , Anti-Bacterial Agents/pharmacology , Anti-Bacterial Agents/metabolism
2.
Curr Microbiol ; 81(6): 142, 2024 Apr 16.
Article in English | MEDLINE | ID: mdl-38625396

ABSTRACT

The present work aims to quantitatively and qualitatively monitor the production of lipopeptide mixtures by Bacillus methylotrophicus DCS1 strain in Landy medium and to investigate the antifungal activities of DCS1 strain and its produced lipopeptides. The in vitro activities were tested by the direct confrontation and agar well diffusion methods, while the in vivo study was carried out in order to test the efficiency of DCS1 bacterial suspension in the control of Fusarium wilt in tomato plants. Identification of lipopeptides by mass spectrometry (LC/MSD-TOF) showed that lipopeptide isoforms produced during the first 24 h and 48 h of fermentation are identical, belonging to bacillomycin D and fengycins A and B homologues with a difference in the yield of production. After 72 h of fermentation corresponding to the end of incubation period, B. methylotrophicus DCS1 is able to produce a mixture of surfactin, pumilacidin, iturin A/mycosubtilin, iturin C1, bacillomycin D and fengycins A and B isoforms. The results of in vitro antifungal experiments suggest that B. methylotrophicus DCS1 has a significant potential as a biocontrol agent, owing to lipopeptides produced, endowed with antifungal activity against several phytopathogenic fungi. The curative treatment of tomato plants with DCS1 bacterial suspension was more effective in the protection against Fusarium oxysporum f. sp. radicis-lycopersici (FORL) than the preventive treatment by comparing the average number of leaves remaining healthy after 30 days of each treatment and the appearance of tomato plants roots. The results indicate that B. methylotrophicus DCS1 exhibit a significant suppression of Fusarium wilt symptoms in tomato plants comparable to that of commercial fungicides and could be an alternative to chemically synthesized pesticides.


Subject(s)
Bacillus , Fusarium , Solanum lycopersicum , Antifungal Agents/pharmacology , Lipopeptides/pharmacology , Protein Isoforms
3.
Food Sci Biotechnol ; 32(11): 1595-1609, 2023 Oct.
Article in English | MEDLINE | ID: mdl-37637836

ABSTRACT

Bacillus subtilis SPB1 derived biosurfactants (BioS) proved its bio-control activity against Agrobacterium tumefaciens using tomato plant. Almost 83% of disease symptoms triggered by Agrobacterium tumefaciens were reduced. Aiming potential application, we studied lipopeptide cost-effective production in both fermentations systems, namely the submerged fermentation (SmF) and the solid-state fermentation (SSF) as well as the use of Aleppo pine waste and confectionery effluent as cheap substrates. Optimization studies using Box-Behnken (BB) design followed by the analysis with response surface methodology were applied. When using an effluent/sea water ratio of 1, Aleppo pine waste of 14.08 g/L and an inoculum size of 0.2, a best production yield of 17.16 ± 0.91 mg/g was obtained for the SmF. While for the SSF, the best production yield of 27.59 ± 1.63 mg/g was achieved when the value of Aleppo pine waste, moisture, and inoculum size were, respectively, equal to 25 g, 75%, and 0.2. Hence, this work demonstrated the superiority of SSF over SmF.

4.
Microorganisms ; 11(4)2023 Apr 21.
Article in English | MEDLINE | ID: mdl-37110509

ABSTRACT

A wide array of bacteria and fungi are known for their association with pests that impact the health of the olive tree. The latter presents the most economically important cultivation in Tunisia. The microbial diversity associated with olive orchards in Tunisia remains unknown and undetermined. This study investigated microbial diversity to elucidate the microbial interactions that lead to olive disease, and the bio-prospects for potential microbial biocontrol agents associated with insect pests of economic relevance for olive cultivation in the Mediterranean area. Bacterial and fungal isolation was made from soil and olive tree pests. A total of 215 bacterial and fungal strains were randomly isolated from eight different biotopes situated in Sfax (Tunisia), with different management practices. 16S rRNA and ITS gene sequencing were used to identify the microbial community. The majority of the isolated bacteria, Staphylococcus, Bacillus, Alcaligenes, and Providencia, are typical of the olive ecosystem and the most common fungi are Penicillium, Aspergillus, and Cladosporium. The different olive orchards depicted distinct communities, and exhibited dissimilar amounts of bacteria and fungi with distinct ecological functions that could be considered as promising resources in biological control.

5.
J Appl Microbiol ; 134(3)2023 Mar 01.
Article in English | MEDLINE | ID: mdl-36722150

ABSTRACT

AIMS: This study aimed to improve the screening strategy for the selection of biocontrol agents with high biocontrol efficacy against fire blight disease. METHODS AND RESULTS: A two-step screening procedure consisting of in-vitro laboratory tests and an ex-vivo test system using detached pear leaves was applied to 43 Bacillus strains originated from the rhizosphere and the aerial parts of apple and pear plants. The grouping of the studied strains and the tested traits based on the principal component analysis and the two-way hierarchical cluster analysis showed that siderophore production and biofilm formation are the most desirable traits in a Bacillus biocontrol agent to control fire blight disease and that rhizospheric originating strains are the most effective. CONCLUSIONS: In contrast to the previous screening strategies that are often insufficient to select the most suitable microorganisms, this study reported an improved strategy based on the microbial competition traits to select potential Bacillus biocontrol agents with high biocontrol efficacy against fire blight disease.


Subject(s)
Bacillus , Malus , Pyrus , Plant Diseases/prevention & control
6.
Circ Econ Sustain ; 1(4): 1423-1437, 2021.
Article in English | MEDLINE | ID: mdl-34888554

ABSTRACT

Rapid climate and environmental change at limited, regional, and general scales have been a major concern for researchers in a number of fields, such as topography, economy, environment, and sustainable development. Changes in land cover and land use have taken into account due to potential impacts on soil depletion, amplified run-off, water balance, and climate change. A detailed understanding of the characteristics of land exploitation and land structure is indispensable for the study of their influences on life and nature. In addition, urban extension is a major form of land extraction and land transformation, as it relates to the rise in population and the availability of financial services. Remote sensing records have been shown to be important for reporting and perceiving urban development and transition, and for providing critical information for future growth. Transformation and shift identification are the tools used to recognise distinctions in a land cover by tracking them at various times. In addition, various change identification and detection approaches are routinely tested with the goal of providing the greatest change detection deductions for a particular appliance. This review would aim to establish a practical plan that combines remote sensing techniques, on the one hand, and modelling approaches, on the other, to track land use, to cover changes, and to predict future trends.

7.
Acta Orthop Belg ; 87(2): 285-291, 2021 Jun.
Article in English | MEDLINE | ID: mdl-34529382

ABSTRACT

Pelvic fixation during procedures performed to treat spinal deformities in paediatric patients remains challenging. No computed tomography studies in paediatric have assessed the optimal trajectory of ilio- sacral screws to prevent screw malposition. We used pelvic computed tomography from 80 children divided into four groups : females <10 and ≥10 years and males <10 and ≥10 years. A secure triangular corridor parallel to the upper S1 endplate was delineated based on three fixed landmarks. The optimal screw insertion angle was subtended by the horizontal and the line bisecting the secure corridor. Student's t test was applied to determine whether the optimal screw insertion angle and/or anatomical parameters were associated with age and/or sex. Mean optimal angle was 32.3°±3.6°, 33.8°±4.7°, 30.2°±5.0°, and 30.4°±4.7° in the younger females, younger males, older females, and older males, respectively. The mean optimal angle differed between the two age groups (p=0.004) but not between females and males (p=0.55). Optimal mean screw length was 73.4±9.9 mm. Anatomical spinal canal parameters in the transverse plane varied with age (p=0.02) and with sex in the older children (p=0.008), and those in the sagittal plane varied with sex (p=0.04). Age affected ilio-sacral screw positioning, whereas sex did not. Several anatomical spinal canal parameters varied with age and sex. These results should help to ensure safe and easy ilio-sacral screw placement within a secure corridor.


Subject(s)
Pelvic Bones , Adolescent , Bone Screws , Child , Female , Fracture Fixation, Internal , Humans , Male , Sacrum/diagnostic imaging , Sacrum/surgery , Tomography, X-Ray Computed
8.
Environ Sci Pollut Res Int ; 28(32): 44132-44139, 2021 Aug.
Article in English | MEDLINE | ID: mdl-33844142

ABSTRACT

The current global health crisis is unprecedented in modern times. It has killed numerous people, caused great suffering, and turned many people's lives upside down. This study seeks to investigate the role of some pollutants and the meteorological parameters in the transmission of the virus (SARS-CoV-2). The number of infections identified in Saudi Arabia, a country with a hot climate, was studied for a period between March 9, 2020 and November 19, 2020, which was characterized by a single wave with a peak of 4,919 cases on June 17, 2020. Based on count data models, we observed that air pollution and meteorological parameters considerably influenced the daily evolution of infections in most affected cities of Saudi Arabia (Riyadh, Jeddah, and Makkah) where the prevalence of the disease was relatively high during summer 2020. Our study suggests that air pollution could be a significant risk factor for respiratory infections and virus transmission. On the other hand, meteorological factors and high concentration of air pollutants should be taken into account by public decision-makers in Saudi Arabia when seeking to limit COVID-19 transmission.


Subject(s)
Air Pollutants , Air Pollution , COVID-19 , Air Pollutants/analysis , Air Pollution/analysis , Humans , SARS-CoV-2 , Saudi Arabia
9.
Tunis Med ; 99(6): 601-606, 2021.
Article in English | MEDLINE | ID: mdl-35244911

ABSTRACT

OBJECTIVE: Measure the effect of the strategy to fight the Covid-19 pandemic, based on containment, on the practice of orthopedic and trauma surgery in Tunisia. METHODS: This is a comparative study, concerning the impact of Covid-19 on the flow of patients, operated in orthopedic surgery and trauma departments, during the containment period from March 12, 2020 to April 30, 2020, comparing it to the same period of the year 2019, in the Central-East region of Tunisia (Kairouan, Sousse, Mahdia, Monastir). RESULTS: A significant decrease of 27% in the flow of patients admitted to orthopedic surgery departments in central-eastern Tunisia, during the 2020 containment period, compared to the same period of the previous year was documented. This decrease was generally widespread, notified in three orthopedic departments: Sousse (39%; p<10-3), Monastir (29%; p<10-3) and Mahdia (27%; p<10-3). It focused on the following three groups: infections (45%; p<10-3), wounds (30%; p<10-2), and fractures (20%; p<10-3). CONCLUSION: The collateral effects of the strategy to fight the Covid-19 pandemic, are "obvious" in orthopedic surgical practice. A health crisis management plan (including disasters and pandemics) should be better prepared in orthopedic surgery departments.


Subject(s)
COVID-19 , Orthopedics , COVID-19/epidemiology , COVID-19/prevention & control , Humans , Pandemics/prevention & control , SARS-CoV-2 , Tunisia/epidemiology
10.
BMC Microbiol ; 20(1): 307, 2020 10 12.
Article in English | MEDLINE | ID: mdl-33046014

ABSTRACT

BACKGROUND: Olive production is the main agricultural activity in Tunisia. The diversity of fungi was explored in two different olive groves located in two distant geographical zones in Sfax (Tunisia) with different management practices. RESULTS: Fungal isolation was made from soil and the major olive tree pests, namely the Olive fly, Bactrocera oleae Gmelin (Diptera: Tephritidae), and the Olive psyllid, Euphyllura olivina Costa (Homoptera: Psyllidae). A total of 34 fungal isolates were identified according to their phenotypic, genotypic, biochemical and biological activities. Twenty fungal species were identified belonging to six different genera (Alternaria, Aspergillus, Cladosporium, Fusarium, Lecanicillium and Penicillium) by the analysis of their ITS1-5.8S-ITS2 ribosomal DNA region. Different bioassays performed in this work revealed that 25/34 (73.5%) of the identified fungal isolates showed an entomopathogenic and/or antagonistic activity, 9/34 (26.5%) of them displayed phytopathogenic features. CONCLUSIONS: Fungal species that showed entomopathogenic and/or antagonistic potentialities and that are non-phytopathogenic, (17/34; 50%) of our fungal isolates, could be explored for olive protection against fungal diseases and pests, and might have a future application as biocontrol agents.


Subject(s)
Fungi/genetics , Fungi/physiology , Olea/microbiology , Tephritidae/microbiology , Agriculture , Animals , Fungi/classification , Fungi/isolation & purification , Pest Control, Biological , Soil Microbiology , Tunisia
11.
Pan Afr Med J ; 36: 186, 2020.
Article in English | MEDLINE | ID: mdl-32952830

ABSTRACT

INTRODUCTION: obstetric hemorrhage is estimated to cause 25% of all maternal deaths and is the leading direct cause of maternal mortality worldwide. The World Health Organization recommended the use of uterotonics that should be offered for all women who will give birth but in some countries or in special situations oxytocin is not available. The goal of this study is to determine whether the 400µg dose of Misoprostol decreases the incidence of postpartum hemorrhage (PPH) of women who did not show signs of hemorrhage. METHODS: a prospective randomized double blind controlled trial was conducted between February 2012 and June 2012, among women in the active stage of labor attending the Obstetric Gynecology Department, University Hospital Farhat Hached of Sousse, Tunisia. Women with term singleton pregnancies greater than 32 weeks of amenorrhea with anticipated vaginal delivery were eligible for the study. Participants were randomly assigned to receive 400 µg sublingual Misoprostol or 2 ets of placebo immediately after cord clamping. The primary outcome measures were an estimation of blood loss including the subjective finding of vaginal hemorrhage > 500 ml, the decrease of hemoglobin and hematocrit, a change in hemodynamic parameters, and the need for additional dose of oxytocin. Secondary outcomes were occurrence of possible side effects such as: headache, nausea, vomiting, pyrexia, diarrhea and abdominal pain. RESULTS: a total of 211 patients were randomized: 111 in the Misoprostol group (Cytotec*) and 100 patients in the placebo group. The two groups were similar in terms of sociodemographic characteristics. Significant difference between the 400-µg of Misoprostol and placebo group were recorded in mean postpartum blood and PPH occurrence. The difference in pre- and postpartum hemoglobin loss (expressed in grams per 100 ml) was 1.21 ± 1.05 for the Misoprostol group and 1.51 ± 0.74 for the placebo group with significant difference (p = 0.02). No differences were observed in the occurrence of headache, dizziness, vomiting, diarrhea and metallic taste but the incidence of shivering was more than twice as great among women receiving Misoprostol than among those treated with placebo with a significant difference (p = 0.01). Similarly, women who received Misoprostol had a significantly higher mean temperature after delivery in comparison with those receiving placebo. CONCLUSION: misoprostol, administered as 400 µg after delivery, appears to be effective for the prevention of post-partum hemorrhage, but its side effects appears to be significant.


Subject(s)
Delivery, Obstetric , Misoprostol/administration & dosage , Oxytocics/administration & dosage , Postpartum Hemorrhage/prevention & control , Administration, Sublingual , Adult , Double-Blind Method , Female , Humans , Labor, Obstetric , Male , Misoprostol/adverse effects , Oxytocics/adverse effects , Pregnancy , Prospective Studies , Tunisia , Young Adult
12.
Tunis Med ; 98(5): 348-354, 2020 May.
Article in English | MEDLINE | ID: mdl-32548837

ABSTRACT

OBJECTIVE: Report the results of a participatory approach in Tunisian orthopedic surgery, for the development of a consensus of experts, on the identification of the list of pathologies to always be considered as non-postponable emergencies, during the COVID-19 pandemic. MATERIAL AND METHODS: This descriptive study of the opinions of Tunisian experts covered all orthopedic morbidities classified into three homogeneous groups: trauma, infections and tumors of the musculoskeletal system. The attitudes of the interviewees were collected using the "Delphi" method, using a "Google-Form" questionnaire, sent by email to all of the Tunisian university orthopedic surgeons in practice, and registered at the SOTCOT. Consensus has been established for an item, if validated by at least 80% of the experts. The analysis of the results focused on the first 30 responses to this "online" form. RESULTS: Tunisian experts agreed on the continuity of the urgency of taking in charge all the items of orthopedic morbidity during the COVID-19 pandemic, apart from the following affections: aseptic nonunions in the upper and lower limbs, aggressive giant cell tumors, and hyperalgesic disc herniations, where agreement rates were only at 8%, 12%, 58% and 77%. CONCLUSION: Relative to its disciplinary and professional specificities, the majority the of orthopedic conditions were still considered as emergencies, during the COVID-19 pandemic, which did not lend to postponement of the surgery. However, their management should obey to the recommendations of "Sorting" and the " COVID-19 Patient Pathway ", established by national authorities.


Subject(s)
Coronavirus Infections/epidemiology , Emergencies , Musculoskeletal Diseases/therapy , Orthopedic Procedures/statistics & numerical data , Pneumonia, Viral/epidemiology , COVID-19 , Consensus , Delphi Technique , Humans , Musculoskeletal Diseases/physiopathology , Pandemics , Surveys and Questionnaires , Tunisia/epidemiology
13.
J Environ Manage ; 264: 110492, 2020 Jun 15.
Article in English | MEDLINE | ID: mdl-32250913

ABSTRACT

Organic matter (OM) is a vital component for a healthy soil, its lack arise a major problem for farmers who need to use commercialized fertilizers with high costs. Considering circular economy approach and for increasing OM availability, water soaked date palm waste was co-composted with goat manure in aerated windrow to produce a soil organic amendment. The OM biodegradation was mainly controlled based on biological parameters and spectroscopic techniques. The results showed a rapid temperature increase during the first week, and a relatively long compost maturity phase. The OM content reduction was of 36% and C/N ratio shifted from 60 to 20 at the process end. During the composting process, the specific ultraviolet absorbance SUVA254, SUVA269 and the SUVA280 values increase confirmed the OM and hydrophilic compounds degradation, as well as substrate content oxidation into aromatic compounds. The Fourier Transform Infrared Spectroscopy (FTIR) analyses of the different samples collected during the process exhibited both OM biodegradation and mineralization. The 3 absorption ratios 1650/2845, 1525/2925 and 2920/1640 confirmed an aromaticity increase by aromatic structures biosynthesis, such as humic-like and fulvic-like substances, with the decomposition/transformation of aliphatic components, polysaccharides, and alcohols. Fluorescence excitation-emission matrix (FEEM) spectroscopy coupled with parallel factor analysis (PARAFAC) evidenced the dissolved organic matter (DOM) humification. A four-component model was obtained, i.e. humic-like component (S1, S2 and S3) and fulvic-like component (S4). The produced compost didn't exhibit any phytotoxicity evidenced by cress seed germination index exceeding 80%. All the analyses confirmed the good quality of the compost issued from mixed date palm waste and goat manure.


Subject(s)
Composting , Phoeniceae , Fertilizers , Humic Substances , Manure , Soil
14.
Tunis Med ; 98(10): 664-673, 2020 Oct.
Article in English | MEDLINE | ID: mdl-33479937

ABSTRACT

OBJECTIVE: Measure the overall and specific satisfaction rates of patients hospitalized in surgical services in Sahloul University Hospital in Sousse during the year 2018. METHODS: The study population was recruited by a quota sample of hospitalized patients in the surgical departments of Sahloul University Hospital in Sousse. Data collection was done via a patient satisfaction questionnaire, administered to outgoing patients. The questionnaire was composed of 33 items exploring technical, administrative, logistical and relational dimensions. Overall patient satisfaction, called "reactivity", was defined by a concomitant positive response to the three questions exploring satisfaction, recommendation and loyalty. RESULTS: A total of 735 patients hospitalized in six surgical departments were included (general surgery, orthopedics, maxillofacial surgery, urology, neurosurgery and cardiovascular surgery). The rates of "satisfaction", "recommendation" and "loyalty" of the patients were 71%, 70% and 69% respectively, equivalent to an "overall positive reactivity" of 62%, 95% CI [58,5%-65.5%], particularly low in the orthopedic department (43%). The logistics dimension was the least appreciated by patients, including room's condition, with almost 23% overall and 17% in the orthopedic department. CONCLUSION: The responsiveness of patients hospitalized in the surgical services of Sahloul University Hospital was low, particularly for items related to the hotel services in the hospital. Furthermore, plans to improve the quality of care and support the performance of public hospitals should pay close attention to the logistical dimension of patients' hospital stays.


Subject(s)
Hospitalization/statistics & numerical data , Patient Satisfaction/statistics & numerical data , Surgical Procedures, Operative/statistics & numerical data , Adult , Female , Hospitals, General , Hospitals, University , Humans , Length of Stay , Male , Middle Aged , Surveys and Questionnaires , Tunisia
15.
Pan Afr Med J ; 33: 237, 2019.
Article in English | MEDLINE | ID: mdl-31692731

ABSTRACT

The wrist is a rare location of septic arthritis. It often involves patients with preexisting joint disease which symptoms could be confused with infection making the diagnosis more difficult and usually delayed. It is often responsible for residual functional impairment and for a high mortality rate among vulnerable patients. We report 6 cases of septic arthritis of the wrist in 3 males and 3 females. The mean age was 32 years in the male patients and 66 in the female patients. All the women were followed for rheumatoid arthritis. Biological results showed elevated rates of white blood cells and c-reactive protein in all the patients. Joint fluid analyses showed elevated white blood cell count. The treatment was medico-surgical consisting in synovectomy, joint debridement and immobilization of the wrist. At the average follow-up of 1 year and 4 months, 3 patients recovered a perfect mobility of the wrist without any limitation of the range of motion nor the strength. Three patients developed stiffness of the wrist.


Subject(s)
Arthritis, Infectious/surgery , Debridement/methods , Wrist Joint/surgery , Adult , Aged , Arthritis, Infectious/diagnosis , Arthritis, Infectious/pathology , Arthritis, Rheumatoid/complications , Female , Follow-Up Studies , Humans , Male , Middle Aged , Range of Motion, Articular , Retrospective Studies , Treatment Outcome , Wrist Joint/pathology
16.
PLoS One ; 14(10): e0223943, 2019.
Article in English | MEDLINE | ID: mdl-31639141

ABSTRACT

Bioprospection for potential microbial biocontrol agents associated with three major insect pests of economic relevance for olive cultivation in the Mediterranean area, namely the olive fly, Bactrocera oleae, the olive moth, Prays oleae, and the olive psyllid, Euphyllura olivina, led to the isolation of several strains of readily cultivable Gram-negative, rod-shaped bacteria from Tunisian olive orchards. Determination of 16S ribosomal RNA encoding sequences identified the bacteria as members of the taxonomic genus Providencia (Enterobacterales; Morganellaceae). A more detailed molecular taxonomic analysis based on a previously established set of protein-encoding marker genes together with DNA-DNA hybridization and metabolic profiling studies led to the conclusion that the new isolates should be organized in a new species within this genus. With reference to their original insect association, the designation "Providencia entomophila" is proposed here for this hypothetical new taxon.


Subject(s)
Insecta/microbiology , Olea/parasitology , Pest Control, Biological , Providencia/genetics , Animals , Bacterial Physiological Phenomena , DNA, Bacterial/genetics , Metabolic Networks and Pathways , Olea/growth & development , Providencia/classification , Providencia/isolation & purification , Providencia/metabolism , RNA, Ribosomal, 16S/genetics
17.
Microorganisms ; 7(9)2019 Sep 03.
Article in English | MEDLINE | ID: mdl-31484434

ABSTRACT

Oomycete and fungal pathogens, mainly Phytophthora and Fusarium species, are notorious causal agents of huge economic losses and environmental damages. For instance, Phytophthora ramorum, Phytophthora cryptogea, Phytophthora plurivora and Fusarium solani cause significant losses in nurseries and in forest ecosystems. Chemical treatments, while harmful to the environment and human health, have been proved to have little or no impact on these species. Recently, biocontrol bacterial species were used to cope with these pathogens and have shown promising prospects towards sustainable and eco-friendly agricultural practices. Olive trees prone to Phytophthora and Fusarium disease outbreaks are suitable for habitat-adapted symbiotic strategies, to recover oomycetes and fungal pathogen biocontrol agents. Using this strategy, we showed that olive trees-associated microbiome represents a valuable source for microorganisms, promoting plant growth and healthy benefits in addition to being biocontrol agents against oomycete and fungal diseases. Isolation, characterization and screening of root microbiome of olive trees against numerous Phytophthora and other fungal pathogens have led to the identification of the Bacillus velezensis OEE1, with plant growth promotion (PGP) abilities and strong activity against major oomycete and fungal pathogens. Phylogenomic analysis of the strain OEE1 showed that B. velezensis suffers taxonomic imprecision that blurs species delimitation, impacting their biofertilizers' practical use. Genome mining of several B. velezensis strains available in the GenBank have highlighted a wide array of plant growth promoting rhizobacteria (PGPR) features, metals and antibiotics resistance and the degradation ability of phytotoxic aromatic compounds. Strain OEE1 harbours a large repertoire of secreted and volatile secondary metabolites. Rarefaction analysis of secondary metabolites richness in the B. velezenis genomes, unambiguously documented new secondary metabolites from ongoing genome sequencing efforts that warrants more efforts in order to assess the huge diversity in the species. Comparative genomics indicated that B. velezensis harbours a core genome endowed with PGP features and accessory genome encoding diverse secondary metabolites. Gas Chromatography-Mass Spectrometry (GC-MS) analysis of OEE1 Volatile Organic Compounds (VOCs) and Liquid Chromatography High Resolution Mas Spectrometry (LC-HRMS) analysis of secondary metabolites identified numerous molecules with PGP abilities that are known to interfere with pathogen development. Moreover, B. velezensis OEE1 proved effective in protecting olive trees against F. solani in greenhouse experiments and are able to inhabit olive tree roots. Our strategy provides an effective means for isolation of biocontrol agents against recalcitrant pathogens. Their genomic analysis provides necessary clues towards their efficient implementation as biofertilizers.

18.
Microorganisms ; 7(8)2019 Aug 09.
Article in English | MEDLINE | ID: mdl-31405010

ABSTRACT

Halophyte Limoniastrum monopetalum, an evergreen shrub inhabiting the Mediterranean region, has well-documented phytoremediation potential for metal removal from polluted sites. It is also considered to be a medicinal halophyte with potent activity against plant pathogens. Therefore, L. monopetalum may be a suitable candidate for isolating endophytic microbiota members that provide plant growth promotion (PGP) and resistance to abiotic stresses. Selected for biocontrol abilities, these endophytes may represent multifaceted and versatile biocontrol agents, combining pathogen biocontrol in addition to PGP and plant protection against abiotic stresses. In this study 117 root culturable bacterial endophytes, including Gram-positive (Bacillus and Brevibacillus), Gram-negative (Proteus, Providencia, Serratia, Pantoea, Klebsiella, Enterobacter and Pectobacterium) and actinomycete Nocardiopsis genera have been recovered from L. monopetalum. The collection exhibited high levels of biocontrol abilities against bacterial (Agrobacterium tumefaciens MAT2 and Pectobacterium carotovorum MAT3) and fungal (Alternaria alternata XSZJY-1, Rhizoctonia bataticola MAT1 and Fusarium oxysporum f. sp. radicis lycopersici FORL) pathogens. Several bacteria also showed PGP capacity and resistance to antibiotics and metals. A highly promising candidate Bacillus licheniformis LMRE 36 with high PGP, biocontrol, metal and antibiotic, resistance was subsequently tested in planta (potato and olive trees) for biocontrol of a collection of 14 highly damaging Fusarium species. LMRE 36 proved very effective against the collection in both species and against an emerging Fusarium sp. threatening olive trees culture in nurseries. These findings provide a demonstration of our pyramiding strategy. Our strategy was effective in combining desirable traits in biocontrol agents towards broad-spectrum resistance against pathogens and protection of crops from abiotic stresses. Stacking multiple desirable traits into a single biocontrol agent is achieved by first, careful selection of a host for endophytic microbiota recovery; second, stringent in vitro selection of candidates from the collection; and third, application of the selected biocontrol agents in planta experiments. That pyramiding strategy could be successfully used to mitigate effects of diverse biotic and abiotic stresses on plant growth and productivity. It is anticipated that the strategy will provide a new generation of biocontrol agents by targeting the microbiota of plants in hostile environments.

19.
Water Sci Technol ; 79(7): 1276-1286, 2019 Apr.
Article in English | MEDLINE | ID: mdl-31123227

ABSTRACT

This paper is built on the Fenton-like oxidation of p-hydroxybenzoic acid (p-HBZ) in the presence of H2O2 and 3%Fe supported on CeO2-TiO2 aerogels under mild conditions. These catalysts were deeply characterized by X-ray diffraction (XRD), hydrogen temperature programmed reduction (H2-TPR), transmission electron microscopy (TEM), scanning transmission electron microscopy (STEM) and X-ray photoelectron spectroscopy (XPS). The effect of thermal treatment, pH (2-3, 5, 7), H2O2/p-HBZ molar ratio (5, 15, 20, 25) and reaction temperature (25 °C, 40 °C and 60 °C) on the catalytic properties of supported Fe catalysts are studied. Our results highlight the role of CeO2 and the calcination of the catalyst to obtain the highest catalytic properties after 10 min: 73% of p-HBZ conversion and 52% of total organic carbon (TOC) abatement.


Subject(s)
Hydroxybenzoates/chemistry , Catalysis , Hydrogen Peroxide/chemistry , Iron/chemistry , Oxidation-Reduction , X-Ray Diffraction
20.
Biodegradation ; 30(4): 273-286, 2019 08.
Article in English | MEDLINE | ID: mdl-30523478

ABSTRACT

In the wake of an increased attention on the eco-friendly biopesticidal products and the rising market requirements for organic agents, lipopeptides compounds have been described as biological control agents which improve the overall health growth and development of plants. Nevertheless, their high production cost constitue the major flaw in their wide use to control plant diseases. The present article aims to formulate an economic media for lipopeptides production by Bacillus mojavensis A21 for application as natural fungicides for plant disease treatment. We herein demonstrated the suitability of the potato waste, as low cost substrate, for lipopeptides production. Moreover, sea water  was found to be a good mineral salts sources. In the second part of this study, we investigate the inhibitory activity of A21 lipopeptides against the phtopathogenic Fusarium sp. The in vitro test showed a minimal inhibitory concentration of about 0.3 mg/ml. The microscopic examination, of the treated Fusarium revealed an excessive lysis of the mycelia ultrastructure with destructed spores. The in vivo antagonist activity was confirmed towards the infected potato tubers. A21 lipopeptides are effective in decreasing by about 78.26% and 60.68% when applied as preventive and curative treatments, respectively, as compared to the untreated tubers.


Subject(s)
Bacillus , Fusarium , Antifungal Agents , Biodegradation, Environmental , Lipopeptides
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