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1.
J Med Chem ; 67(1): 774-781, 2024 01 11.
Article in English | MEDLINE | ID: mdl-38156904

ABSTRACT

SOS1 and SOS2 are guanine nucleotide exchange factors that mediate RTK-stimulated RAS activation. Selective SOS1:KRAS PPI inhibitors are currently under clinical investigation, whereas there are no reports to date of SOS2:KRAS PPI inhibitors. SOS2 activity is implicated in MAPK rebound when divergent SOS1 mutant cell lines are treated with the SOS1 inhibitor BI-3406; therefore, SOS2:KRAS inhibitors are of therapeutic interest. In this report, we detail a fragment-based screening strategy to identify X-ray cocrystal structures of five diverse fragment hits bound to SOS2.


Subject(s)
Furans , Guanine Nucleotide Exchange Factors , Proto-Oncogene Proteins p21(ras) , Quinazolines , X-Rays , Proto-Oncogene Proteins p21(ras)/genetics , Proto-Oncogene Proteins p21(ras)/metabolism , Guanine Nucleotide Exchange Factors/metabolism , Cell Line , SOS1 Protein/metabolism
2.
Bioorg Med Chem Lett ; 29(19): 126610, 2019 10 01.
Article in English | MEDLINE | ID: mdl-31471167

ABSTRACT

Focussed studies on imidazopyridine inhibitors of Plasmodium falciparum cyclic GMP-dependent protein kinase (PfPKG) have significantly advanced the series towards desirable in vitro property space. LLE-based approaches towards combining improvements in cell potency, key physicochemical parameters and structural novelty are described, and a structure-based design hypothesis relating to substituent regiochemistry has directed efforts towards key examples with well-balanced potency, ADME and kinase selectivity profiles.


Subject(s)
Bridged Bicyclo Compounds, Heterocyclic/pharmacology , Cyclic GMP-Dependent Protein Kinases/antagonists & inhibitors , Imidazoles/chemistry , Malaria/drug therapy , Plasmodium falciparum/drug effects , Protein Kinase Inhibitors/pharmacology , Pyridines/chemistry , Bridged Bicyclo Compounds, Heterocyclic/chemistry , Humans , Malaria/enzymology , Malaria/parasitology , Models, Molecular , Molecular Docking Simulation , Plasmodium falciparum/enzymology , Protein Conformation , Protein Kinase Inhibitors/chemistry
3.
Bioorg Med Chem Lett ; 29(3): 509-514, 2019 02 01.
Article in English | MEDLINE | ID: mdl-30553738

ABSTRACT

Development of a class of bicyclic inhibitors of the Plasmodium falciparum cyclic GMP-dependent protein kinase (PfPKG), starting from known compounds with activity against a related parasite PKG orthologue, is reported. Examination of key sub-structural elements led to new compounds with good levels of inhibitory activity against the recombinant kinase and in vitro activity against the parasite. Key examples were shown to possess encouraging in vitro ADME properties, and computational analysis provided valuable insight into the origins of the observed activity profiles.


Subject(s)
Antimalarials/pharmacology , Cyclic GMP-Dependent Protein Kinases/antagonists & inhibitors , Imidazoles/pharmacology , Plasmodium falciparum/drug effects , Protein Kinase Inhibitors/pharmacology , Pyridines/pharmacology , Antimalarials/chemical synthesis , Antimalarials/chemistry , Cyclic GMP-Dependent Protein Kinases/metabolism , Dose-Response Relationship, Drug , Imidazoles/chemical synthesis , Imidazoles/chemistry , Ligands , Molecular Structure , Parasitic Sensitivity Tests , Plasmodium falciparum/enzymology , Protein Kinase Inhibitors/chemical synthesis , Protein Kinase Inhibitors/chemistry , Pyridines/chemical synthesis , Pyridines/chemistry , Structure-Activity Relationship
4.
Bioorg Med Chem Lett ; 29(4): 668-673, 2019 02 15.
Article in English | MEDLINE | ID: mdl-30554956

ABSTRACT

Parkinson's disease is a relatively common neurological disorder with incidence increasing with age. Present treatments merely alleviate the symptoms and do not alter the course of the disease, thus identification of disease modifying therapies represents a significant unmet medical need. Mutations in the LRRK2 gene are risk-factors for developing PD and it has been hypothesized that the increased kinase activity of certain LRRK2 mutants are responsible for the damage of the dopaminergic neurons, thus LRRK2 inhibitors offer the potential to target an underlying cause of the disease. In this communication, we describe hit-to-lead medicinal chemistry program on a novel series of 5-azaindazoles. Compound 1, obtained from high-throughput screening was optimized to a highly potent, selective series of molecules with promising DMPK properties. Introduction of heterocycles at the 3-position were found to significantly increase the potency and kinase selectivity, whilst changes to the 4-chlorobenzyl group improved the physicochemical properties. Our series was licensed to a major pharmaceutical company for further development.


Subject(s)
Leucine-Rich Repeat Serine-Threonine Protein Kinase-2/antagonists & inhibitors , Protein Kinase Inhibitors/pharmacology , Animals , Humans , Parkinson Disease/metabolism
5.
Bioorg Med Chem Lett ; 28(19): 3168-3173, 2018 10 15.
Article in English | MEDLINE | ID: mdl-30174152

ABSTRACT

A series of trisubstituted thiazoles have been identified as potent inhibitors of Plasmodium falciparum (Pf) cGMP-dependent protein kinase (PfPKG) through template hopping from known Eimeria PKG (EtPKG) inhibitors. The thiazole series has yielded compounds with improved potency, kinase selectivity and good in vitro ADME properties. These compounds could be useful tools in the development of new anti-malarial drugs in the fight against drug resistant malaria.


Subject(s)
Antimalarials/pharmacology , Cyclic GMP-Dependent Protein Kinases/antagonists & inhibitors , Plasmodium falciparum/enzymology , Protein Kinase Inhibitors/pharmacology , Protozoan Proteins/antagonists & inhibitors , Thiazoles/pharmacology , Alkylation , Antimalarials/chemistry , Humans , Oxidation-Reduction , Protein Kinase Inhibitors/chemistry , Structure-Activity Relationship , Thiazoles/chemistry
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