Low-Energy Collisions of Protonated Enantiopure Amino Acids with Chiral Target Gases.

Here we report on the gas-phase interactions between protonated enantiopure amino acids (L- and D-enantiomers of Met, Phe, and Trp) and chiral target gases [(R)- and (S)-2-butanol, and (S)-1-phenylethanol] in 0.1-10.0 eV low-energy collisions. Two major processes are seen to occur over this collision energy regime, collision-induced dissociation and ion-molecule complex formation. Both processes were found to be independent of the stereo-chemical composition of the interacting ions and targets. These data shed light on the currently debated mechanisms of gas-phase chiral selectivity by demonstrating the inapplicability of the three-point model to these interactions, at least under single collision conditions. Graphical Abstract.

Activation energies for evaporation from protonated and deprotonated water clusters from mass spectra.

Experimental mass abundance spectra are used to extract evaporative activation energies (dissociation energies) for protonated water clusters, (H(2)O)(N)H(+), and deprotonated water clusters, (H(2)O)(N)OH(-), in the size range up to hundred molecules. The inversion is achieved by application of the shell correction method adapted from nuclear physics to the abundance spectra. The well known abundance anomaly for protonated clusters which occurs for N=20-22 is found to have the characteristic behavior of a shell closing, whereas other apparent magic numbers are only prominent peaks in the abundance spectra because of the instability of the evaporative precursor. For the deprotonated clusters, we find a similar shell closing for N=55-56.

Dissociative recombination cross section and branching ratios of protonated dimethyl disulfide and N-methylacetamide.

Dimethyl disulfide (DMDS) and N-methylacetamide are two first choice model systems that represent the disulfide bridge bonding and the peptide bonding in proteins. These molecules are therefore suitable for investigation of the mechanisms involved when proteins fragment under electron capture dissociation (ECD). The dissociative recombination cross sections for both protonated DMDS and protonated N-methylacetamide were determined at electron energies ranging from 0.001 to 0.3 eV. Also, the branching ratios at 0 eV center-of-mass collision energy were determined. The present results give support for the indirect mechanism of ECD, where free hydrogen atoms produced in the initial fragmentation step induce further decomposition. We suggest that both indirect and direct dissociations play a role in ECD.

How persistent is cyclopropyl upon nucleophilic substitution, and is frontside displacement possible? A model study.

Quantum chemical model calculations (MP2/6-31G(d,p)) demonstrate that frontside nucleophilic substitution is not possible in the reaction between water and protonated cyclopropanol. Instead, ring opening occurs, in accordance with a well-known disrotary ring-opening mechanism. When the cyclopropane ring is embedded in a stabilizing bicyclic structure, as in protonated bicyclo[3.1.0]hexanol, the mechanistic landscape changes. In this case frontside nucleophilic substitution occurs, and has a potential energy barrier which is lower than that of the corresponding backside substitution, which implies that the stereochemical outcome of this gas-phase nucleophilic substitution reaction is uncoupled from its kinetic order. This and similar results challenge the traditional view that nucleophilic substitution reactions should be categorized as being either S(N)1 or S(N)2.