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DNA Seq ; 12(4): 215-27, 2001 Nov.
Article in English | MEDLINE | ID: mdl-11916256

ABSTRACT

A 46,823 bp region of human chromosome 5q23.1 encompassing the seven-exon lysyl oxidase gene was characterized at the primary sequence level. Approximately 17.4% of this region is comprised of repetitive elements. The gene colocalizes with microsatellite marker D5S467. It is flanked by two candidate nuclear matrix association regions (MARs). The 5' MAR centered at position 12,500 is of the AT-rich and curved DNA class. This is followed by a large CpG island containing fifty-seven putative regulatory elements which extend from just upstream of exon 1 to intron 2. The larger 3' MAR, spans position 35,050-39,750 and is characterized by a TG-rich kinked structure that also contains a topoisomerase II binding site. Based on these results model of the transcriptional regulation of the lysy/oxidase gene is presented.


Subject(s)
Protein-Lysine 6-Oxidase/genetics , Base Sequence , Computational Biology , Humans , Molecular Sequence Data , Promoter Regions, Genetic , Sequence Analysis, DNA
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