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1.
Article in English | MEDLINE | ID: mdl-23756262

ABSTRACT

2-(Thiophen-2-yl)-1H-benzo[d]imidazole (TBI) was synthesized under microwave conditions and was characterized by FT-IR, dispersive Raman, (1)H-, (13)C-, DEPT-, HETCOR-NMR spectroscopies and density functional theory (DFT) computations. The FT-IR and dispersive Raman spectra of TBI were recorded in the regions 4000-400 cm(-1) and 4000-100 cm(-1). The experimental vibrational spectra were interpreted with the help of normal coordinate analysis based on DFT/B3LYP/6-311++G(d,p) theory level for the more stable tautomeric form (Tautomer 1). The complete vibrational assignments were performed on the basis of the potential energy distribution (PED) of the vibrational modes, calculated with scaled quantum mechanical (SQM) method. A satisfactory consistency between the experimental and theoretical findings was obtained. The frontier molecular orbitals (FMOs), atomic charges and NMR shifts of the two stable tautomeric forms were also obtained at the same theory level without any symmetry restrictions. In addition, the title compound was screened for its antimicrobial activity and was found to be exhibit antifungal and antibacterial effects.


Subject(s)
Anti-Infective Agents/chemistry , Imidazoles/chemistry , Thiophenes/chemistry , Anti-Infective Agents/pharmacology , Bacteria/drug effects , Bacterial Infections/drug therapy , Fungi/drug effects , Humans , Imidazoles/pharmacology , Magnetic Resonance Spectroscopy , Models, Molecular , Mycoses/drug therapy , Quantum Theory , Spectroscopy, Fourier Transform Infrared , Spectrum Analysis, Raman , Thiophenes/pharmacology
2.
Spectrochim Acta A Mol Biomol Spectrosc ; 103: 222-31, 2013 Feb 15.
Article in English | MEDLINE | ID: mdl-23261617

ABSTRACT

This study reports the structural characterization of a bis-benzimidazole derivative, 1,4-Bis(1-methyl-2-benzimidazolyl)benzene (BMBB), by using spectroscopic and quantum chemical methods. The BMBB molecule was synthesized under microwave conditions and was characterized by using single-crystal X-ray diffraction, FT-IR, dispersive Raman and NMR spectroscopies. The potential energy surface scan study was carried out for the conformation of the theoretical structure. Quantum chemical calculations of relative energies, molecular geometry, vibrational wavenumbers, frontier molecular orbitals, atomic charges and gauge including atomic orbital (GIAO) (1)H and (13)C-NMR chemical shifts of the compound were carried out by using density functional method (DFT) at B3LYP/6-311++G(d,p) theory level. The complete assignments of the vibrational modes were performed with DFT calculations combined with scaled quantum mechanics force field (SQMFF) methodology. A satisfactory consistency between the experimental and theoretical findings was obtained. On account of the relative energies, population analysis and XRD results, the most stable conformational form of the molecule was also determined.


Subject(s)
Benzene Derivatives/chemistry , Benzimidazoles/chemistry , Magnetic Resonance Spectroscopy , Models, Molecular , Quantum Theory , Spectroscopy, Fourier Transform Infrared , Spectrum Analysis, Raman , X-Ray Diffraction
3.
Article in English | MEDLINE | ID: mdl-22349891

ABSTRACT

A conformational analysis of the methanesulfonamide-N,N'-1,2-ethanediylbis (msen) was performed by using vibrational and NMR spectroscopies as well as theoretical computations. The possible stable conformers of msen on its potential energy surface were investigated by semi-empirical PM5 method and appropriate structures were defined with B3LYP hybrid density functional theory (DFT) method along with the basis sets of different size and type. Six different rotational isomers were found as the result of DFT calculation. The two isomer, called trans-trans-gauche(+)-eclipsed, synperiplanar (ttg(+)-e,bis) and trans-gauche(+)-gauche(-)-staggered, antiplanar (tg(+)g(-)-s,anti), were considered in the vibrational spectral analysis. The infrared (4000-30 cm(-1)) and Raman (4000-60 cm(-1)) spectra of msen were measured in solid state. For a complete assignment of the vibrational spectra, DFT calculations at B3LYP/6311-G(d,p) theory level combined with scaled quantum mechanics force field (SQMFF) methodology was performed. Furthermore, (13)C and (1)H NMR analyses were performed for six conformers at B3LYP/6-311++G(d,p) level of theory and compared with the experimental findings. Results from experimental and theoretical data showed the ttg(+)-e,bis to be the most stable form of a msen molecule.


Subject(s)
Anti-Infective Agents/chemistry , Ethane/analogs & derivatives , Sulfonamides/chemistry , Magnetic Resonance Spectroscopy , Models, Molecular , Molecular Conformation , Quantum Theory , Spectroscopy, Fourier Transform Infrared , Spectrum Analysis, Raman , Stereoisomerism
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