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2.
Mol Genet Genomics ; 266(5): 740-6, 2002 Jan.
Article in English | MEDLINE | ID: mdl-11810247

ABSTRACT

Structural features of the wheat plastome were clarified by comparison of the complete sequence of wheat chloroplast DNA with those of rice and maize chloroplast genomes. The wheat plastome consists of a 134,545-bp circular molecule with 20,703-bp inverted repeats and the same gene content as the rice and maize plastomes. However, some structural divergence was found even in the coding regions of genes. These alterations are due to illegitimate recombination between two short direct repeats and/or replication slippage. Overall comparison of chloroplast DNAs among the three cereals indicated the presence of some hot-spot regions for length mutations. Whereas the region with clustered tRNA genes and that downstream of rbcL showed divergence in a species-specific manner, the deletion patterns of ORFs in the inverted-repeat regions and the borders between the inverted repeats and the small single-copy region support the notion that wheat and rice are related more closely to each other than to maize.


Subject(s)
DNA, Chloroplast/genetics , Triticum/genetics , Genome, Plant , Molecular Sequence Data , Open Reading Frames , Oryza/genetics , Phylogeny , Repetitive Sequences, Nucleic Acid , Species Specificity , Zea mays/genetics
3.
Thyroid ; 11(8): 725-31, 2001 Aug.
Article in English | MEDLINE | ID: mdl-11525264

ABSTRACT

7-Hydroxystaurosporine (UCN-01) is a selective protein kinase C (PKC) inhibitor and is being developed as a novel anticancer agent. Because of reports that PKC may be involved in the pathogenesis of some forms of thyroid cancers, we examined four thyroid carcinoma lines (FRO, KAT5, NPA, and WRO). These cells were found to have different susceptibility to UCN-01 treatment, and there appeared to be a correlation between UCN-01-induced death and expression levels of endogenous Bcl-2. KAT5 cells, which normally express a low amount of Bcl-2, exhibited significantly higher sensitivity to UCN-01-induced death than the other cell lines. Of interest, susceptibility did not relate to PKC activity or its inhibition by UCN-01. In order to investigate the role of Bcl-2 in UCN-01-induced death, KAT5 cells were transfected to overexpress Bcl-2. KAT5/Bcl-2 cells were capable of conferring resistance to UCN-01-induced death. Furthermore, upregulating of Bcl-2 by 1alpha,25-dihydroxyvitamin D3 (VD3) could protect primary thyroid cell from death induced by UCN-01. Both in situ TUNEL staining and the flow cytometric analysis of cytokeratin-18 (CK18) cleavage confirmed that UCN-01 was indeed inducing apoptosis, and that this effect was inhibited by increased expression of Bcl-2. These results suggest that the Bcl-2 can block the UCN-01-activated cell death pathway and that the expression of Bcl-2 is inversely related to thyroid carcinoma cell susceptibility to UCN-01. Therefore, the analysis of the expression of apoptosis suppressors provides a basis for the use of UCN-01 in the treatment of thyroid cancer.


Subject(s)
Alkaloids/pharmacology , Antineoplastic Agents/pharmacology , Apoptosis/drug effects , Carcinoma, Papillary/physiopathology , Proto-Oncogene Proteins c-bcl-2/metabolism , Thyroid Neoplasms/physiopathology , Vitamin D/analogs & derivatives , Cell Survival/drug effects , Drug Resistance , Humans , Protein Kinase C/metabolism , Proto-Oncogene Proteins/metabolism , Proto-Oncogene Proteins/pharmacology , Staurosporine/analogs & derivatives , Tumor Cells, Cultured , Vitamin D/pharmacology , bcl-2-Associated X Protein
4.
Plant Cell Physiol ; 40(12): 1287-96, 1999 Dec.
Article in English | MEDLINE | ID: mdl-10682349

ABSTRACT

A cDNA clone, 4B-1, previously isolated by differential screening is preferentially expressed in floral organs of Arabidopsis thaliana. Characterization of the full length cDNA and the genetic locus corresponding to 4B-1 cDNA revealed that it potentially encodes a myrosinase binding protein (MBP) which is presumably present in a large myrosinase complex. The deduced amino acid sequence of the polypeptide encoded by cDNA clone (designated f-AtMBP) appeared to consist of two parts: one region at the C-terminal half representing overall homology with AtMBP, an MBP homologue in A. thaliana, and the other at an extended N-terminal region of about 150 amino acids showing significant identity with the N-terminal region of the MBP-related protein reported in Brassica. Expression analysis by RNA blot and in situ hybridization showed that f-AtMBP was specifically expressed in floral meristems, pistils, stamens, petals, and ovules of immature flowers, but no expression was observed in the specialized cells called the myrosin cells in the hypocotyl and cotyledons of developing seeds where myrosinase enzymes are normally found. Although MBPs and MBP-related proteins are considered to be inducible by exogenous application of signal molecules and physical wounding, we found that f-AtMBP expression was not activated by such treatment, suggesting that f-AtMBP is a novel type of MBP specific to floral organs.


Subject(s)
Arabidopsis/genetics , Arabidopsis/metabolism , Carrier Proteins/genetics , Genes, Plant , Glycoproteins/genetics , Glycoside Hydrolases/metabolism , Plant Proteins/genetics , Amino Acid Sequence , Base Sequence , Brassica/genetics , Chromosome Mapping , DNA Primers/genetics , DNA, Complementary/genetics , DNA, Plant/genetics , Gene Expression , In Situ Hybridization, Fluorescence , Intracellular Signaling Peptides and Proteins , Molecular Sequence Data , Phylogeny , Sequence Homology, Amino Acid , Tissue Distribution
5.
Plant Mol Biol ; 38(4): 565-76, 1998 Nov 01.
Article in English | MEDLINE | ID: mdl-9747802

ABSTRACT

We have previously identified two cDNAs encoding vegetative storage proteins (VSPs) in Arabidopsis thaliana. Unlike soybean in which VSPs accumulate at high levels in leaves, A. thaliana VSP mRNAs are abundant in flowers. To understand tissue-specific expression and possible roles of VSPs on reproductive organ development, genes corresponding to VSPs (Vsp1 and Vsp2) and their putative promoters were characterized in this study. Genomic sequence analysis revealed that Vsp1 and Vsp2 resemble each other except in their introns, and that these two genes were organized in a tandem array with an interval of 6 kb in a region. The expression patterns of Vsp1 and Vsp2 were examined using transgenic A. thaliana plants carrying a promoter from Vsp1 or Vsp2 fused to a bacterial beta-glucuronidase (GUS) reporter gene. The promoter from Vsp1 expressed its effect in gynoecia, especially in styles, the basal and distal ends of ovaries and in siliques, whereas the promoter from Vsp2 showed its activity in vegetative shoots, petioles, peduncles and receptacles of floral organs. These results suggest that expression of Vsp1 and Vsp2 may be developmentally regulated in A. thaliana. In the transgenic plants, the GUS activity was induced by wounding in an area around the mid-rib of leaves. Therefore, Vsp1 and Vsp2 promoters appear to have elements required for both tissue specificity and wounding.


Subject(s)
Arabidopsis/genetics , Genes, Plant , Plant Proteins/genetics , Arabidopsis/growth & development , Arabidopsis/metabolism , Base Sequence , Chromosome Mapping , DNA Primers/genetics , Gene Expression Regulation, Developmental , Gene Expression Regulation, Plant , Genes, Reporter , Glucuronidase/genetics , Molecular Sequence Data , Plants, Genetically Modified , Promoter Regions, Genetic , RNA, Messenger/genetics , RNA, Messenger/metabolism , RNA, Plant/genetics , RNA, Plant/metabolism , Sequence Homology, Nucleic Acid , Tissue Distribution
6.
Plant Mol Biol ; 32(4): 759-65, 1996 Nov.
Article in English | MEDLINE | ID: mdl-8980528

ABSTRACT

Seventeen cDNA clones of genes corresponding to mRNAs expressed preferentially in floral organs of Arabidopsis thaliana were obtained by differential screening of a flower bud cDNA library, and classified into five groups (1A, 17A, 1B, 4B and 5B) by cross-hybridization and restriction analysis. Sequence analysis revealed that the 1A-1 and 17A-1 clones encode vegetative storage proteins (VSPs). The VSP mRNAs were detected in a small amount in leaves and increased to a limited level by wounding. Both 1B-1 and 5B-1 clones were homologous to transmembrane protein cDNAs. The protein encoded by 4B-1 clone contained a proline-rich region, but no homologous proteins were found in databases.


Subject(s)
Arabidopsis/genetics , DNA, Complementary/genetics , DNA, Plant/genetics , Gene Expression Regulation, Plant/physiology , Amino Acid Sequence , Cloning, Molecular , Molecular Sequence Data , Plant Leaves/chemistry , RNA, Messenger/analysis , Sequence Analysis, DNA , Sequence Homology, Amino Acid , Sequence Homology, Nucleic Acid
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