Brazilian Kayabi Indian accessions of peanut, Arachis hypogaea (Fabales, Fabaceae): origin, diversity and evolution.

Peanut is a crop of the Kayabi tribe, inhabiting the Xingu Indigenous Park, Brazil. Morphological analysis of Xingu accessions showed variation exceeding that described for cultivated peanuts. This raised questions as to the origin of the Xingu accessions: are they derived from different species, or is their diversity a result of different evolutionary and selection processes? To answer these questions, cytogenetic and genotyping analyses were conducted. The karyotypes of Xingu accessions analyzed are very similar to each other, to an A. hypogaea subsp. fastigiata accession and to the wild allotetraploid A. monticola. The accessions share the number and general morphology of the chromosomes; DAPI+ bands; 5S and 45S rDNA loci distribution and a high genomic affinity with A. duranensis and A. ipaënsis genomic probes. However, the number of CMA3+ bands differs from those determined for A. hypogaea and A. monticola, which are also different from each other. SNP genotyping grouped all Arachis allotetraploids into four taxonomic groups: Xingu accessions were closer to A. monticola and A. hypogaea subsp. hypogaea. Our data suggests that the morphological diversity within these accessions is not associated with a different origin and can be attributed to morphological plasticity and different selection by the Indian tribes.

Genomic characterisation of Arachis porphyrocalyx (Valls & C.E. Simpson, 2005) (Leguminosae): multiple origin of Arachis species with x = 9.

The genus Arachis Linnaeus, 1753 comprises four species with x = 9, three belong to the section Arachis: Arachis praecox (Krapov. W.C. Greg. & Valls, 1994), Arachis palustris (Krapov. W.C. Greg. & Valls, 1994) and Arachis decora (Krapov. W.C. Greg. & Valls, 1994) and only one belongs to the section Erectoides: Arachis porphyrocalyx (Valls & C.E. Simpson, 2005). Recently, the x = 9 species of section Arachis have been assigned to G genome, the latest described so far. The genomic relationship of Arachis porphyrocalyx with these species is controversial. In the present work, we carried out a karyotypic characterisation of Arachis porphyrocalyx to evaluate its genomic structure and analyse the origin of all x = 9 Arachis species. Arachis porphyrocalyx showed a karyotype formula of 14m+4st, one pair of A chromosomes, satellited chromosomes type 8, one pair of 45S rDNA sites in the SAT chromosomes, one pair of 5S rDNA sites and pericentromeric C-DAPI+ bands in all chromosomes. Karyotype structure indicates that Arachis porphyrocalyx does not share the same genome type with the other three x = 9 species and neither with the remaining Erectoides species. Taking into account the geographic distribution, morphological and cytogenetic features, the origin of species with x = 9 of the genus Arachis cannot be unique; instead, they originated at least twice in the evolutionary history of the genus.

Anthropometric parameters and permanent remission of comorbidities 10 years after open gastric bypass in a cohort with high prevalence of super-obesity / Parámetros antropométricos y remisión permanente de comorbilidades 10 años tras baipás gástrico abierto en una cohorte con alta prevalencia de super obesidad

Background and aim: Roux-en-Y gastric bypass (RYGB) is an effective treatment for weight loss in patients with morbid obesity. However, few studies have assessed its long-term efficacy in super-obese patients. The study objective was to analyse the long-term effectiveness of RYGB and its effect on improvement of comorbidities after 10 years of follow-up, and to compare the results depending on baseline BMI (<50kg/m2 vs ≥50kg/m2). Patients and methods: A retrospective study was conducted in 63 patients referred for RYGB with a 10-year or longer follow-up period. Mean BMI before surgery was 55kg/m2. Results: Mean BMI decreased to 38.1kg/m2 at 10 years of follow-up. The success rates according to Reinhold criteria modified by Christou and to Biron's criteria were 30.2% and 54% respectively. The corresponding rates in super-obese patients were 21.4% and 57.1%. Significant, stable improvement was seen in diabetes, dyslipidemia, hypertension, and sleep apnea. Conclusions: Sustained weight loss was achieved after gastric bypass, with a mean excess weight loss of 50.6% after 10 years despite the high prevalence of super-obesity. Comorbidity improvement was maintained (AU)

Antecedentes y objetivos: El baipás gástrico en Y de Roux (RYGB) es un tratamiento efectivo para la pérdida de peso en pacientes con obesidad mórbida. Sin embargo, en pocos estudios se ha evaluado su eficacia a largo plazo en pacientes con superobesidad (IMC ≥ 50kg/m2). El objetivo es analizar la efectividad del RYGB, su efecto sobre la mejoría de las comorbilidades tras 10 años de seguimiento y comparar los resultados en función del IMC inicial (<50kg/m2 vs ≥ 50kg/m2). Pacientes y métodos: Se realizó un estudio retrospectivo sobre 63 pacientes remitidos a RYGB con periodo de seguimiento igual o superior a 10 años. El IMC medio precirugía fue 55kg/m2. Resultados: El IMC medio descendió a 38,1kg/m2 a los 10 años de seguimiento. Las tasas de éxito según los criterios de Reinhold modificados por Christou y según los criterios de Biron fueron 30,2 y 54%. En pacientes con superobesidad estas tasas fueron 21,4 y 57,1%. Se observó remisión estable y significativa de la diabetes, hipertensión y apnea del sueño. Conclusiones:Tras la cirugía bariátrica se consiguió pérdida de peso sostenida, con un porcentaje de exceso de peso perdido de 50,6% a los 10 años a pesar de la alta prevalencia de superobesidad. La mejoría de las comorbilidades permaneció estable (AU)

Anthropometric parameters and permanent remission of comorbidities 10 years after open gastric bypass in a cohort with high prevalence of super-obesity.

BACKGROUND AND AIM: Roux-en-Y gastric bypass (RYGB) is an effective treatment for weight loss in patients with morbid obesity. However, few studies have assessed its long-term efficacy in super-obese patients. The study objective was to analyse the long-term effectiveness of RYGB and its effect on improvement of comorbidities after 10 years of follow-up, and to compare the results depending on baseline BMI (<50kg/m2 vs ≥50kg/m2). PATIENTS AND METHODS: A retrospective study was conducted in 63 patients referred for RYGB with a 10-year or longer follow-up period. Mean BMI before surgery was 55kg/m2. RESULTS: Mean BMI decreased to 38.1kg/m2 at 10 years of follow-up. The success rates according to Reinhold criteria modified by Christou and to Biron's criteria were 30.2% and 54% respectively. The corresponding rates in super-obese patients were 21.4% and 57.1%. Significant, stable improvement was seen in diabetes, dyslipidemia, hypertension, and sleep apnea. CONCLUSIONS: Sustained weight loss was achieved after gastric bypass, with a mean excess weight loss of 50.6% after 10 years despite the high prevalence of super-obesity. Comorbidity improvement was maintained.

Cytogenetic evidences on the evolutionary relationships between the tetraploids of the section Rhizomatosae and related diploid species (Arachis, Leguminosae).

Rhizomatosae is a taxonomic section of the South American genus Arachis, whose diagnostic character is the presence of rhizomes in all its species. This section is of particular evolutionary interest because it has three polyploid (A. pseudovillosa, A. nitida and A. glabrata, 2n = 4x = 40) and only one diploid (A. burkartii, 2n = 2x = 20) species. The phylogenetic relationships of these species as well as the polyploidy nature and the origin of the tetraploids are still controversial. The present study provides an exhaustive analysis of the karyotypes of all rhizomatous species and six closely related diploid species of the sections Erectoides and Procumbentes by cytogenetic mapping of DAPI/CMA heterochromatin bands and 5S and 18-26S rDNA loci. Chromosome banding showed variation in the DAPI heterochromatin distribution pattern, which, together with the number and distribution of rDNA loci, allowed the characterization of all species studied here. The bulk of chromosomal markers suggest that the three rhizomatous tetraploid species constitute a natural group and may have at least one common diploid ancestor. The cytogenetic data of the diploid species analyzed evidenced that the only rhizomatous diploid species-A. burkartii-has a karyotype pattern different from those of the rhizomatous tetraploids, showing that it is not likely the genome donor of the tetraploids and the non-monophyletic nature of the section Rhizomatosae. Thus, the tetraploid species should be excluded from the R genome, which should remain exclusively for A. burkartii. Instead, the karyotype features of these tetraploids are compatible with those of different species of the sections Erectoides and Procumbentes (E genome species), suggesting the hypothesis of multiple origins of these tetraploids. In addition, the polyploid nature and the group of diploid species closer to the tetraploids are discussed.

Corrigenda: Genomic characterisation of Arachis porphyrocalyx (Valls & C.E. Simpson, 2005) (Leguminosae): multiple origin of Arachis species with x = 9. Comparative Cytogenetics 11(1): 29-43. doi: 10.3897/CompCytogen.v11i1.10339.

[This corrects the article DOI: 10.3897/CompCytogen.v11i1.10339.].

Encefalopatía hiperamoniémica tras cistectomía radical y derivación urinaria. Tratamiento nutricional / Hyperammonemic encephalopathy after urinary diversion. Diet therapy

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Successful crosses between fungal-resistant wild species of Arachis (section Arachis) and Arachis hypogaea.

Peanut (Arachis hypogaea) is the fifth most produced oil crop worldwide. Besides lack of water, fungal diseases are the most limiting factors for the crop. Several species of Arachis are resistant to certain pests and diseases. This study aimed to successfully cross the A-genome with B-K-A genome wild species previously selected for fungal disease resistance, but that are still untested. We also aimed to polyplodize the amphihaploid chromosomes; cross the synthetic amphidiploids and A. hypogaea to introgress disease resistance genes into the cultivated peanut; and analyze pollen viability and morphological descriptors for all progenies and their parents. We selected 12 A-genome accessions as male parents and three B-genome species, one K-genome species, and one A-genome species as female parents. Of the 26 distinct cross combinations, 13 different interspecific AB-genome and three AA-genome hybrids were obtained. These sterile hybrids were polyploidized and five combinations produced tetraploid flowers. Next, 16 combinations were crossed between A. hypogaea and the synthetic amphidiploids, resulting in 11 different hybrid combinations. Our results confirm that it is possible to introgress resistance genes from wild species into the peanut using artificial hybridization, and that more species than previously reported can be used, thus enhancing the genetic variability in peanut genetic improvement programs.

Cytological and reproductive aspects in the Caespitosa group of Paspalum / Aspectos citológicos e reprodutivos no grupo Caespitosa do gênero Paspalum

Somatic chromosome numbers are reported for thirty four germplasm accessions of Paspalum, Caespitosa group, representing five different species. All five species have shown x=10 as the basic chromosome number. The diploid 2n=20 chromosome number was confirmed for P. chacoense and P. indecorum, as well as sexuality for the latter. This is the first report of the chromosome number and cytological behavior for P. ligulare (2n=20 and 40), P. pleostachyum (2n=20, 30 and 40) and P. redondense (2n=20 and 40). The present results document regular meiosis in diploid accessions, with primarily bivalent pairing at diakinesis and metaphase I. Polyploids of these species had irregular meiosis, with univalent, trivalent, and quadrivalent chromosome associations. Diploid accessions of P. pleostachyum and P. ligulare have shown a single meiotic embryo-sac, indicating sexual reproduction, while the triploid and one of the tetraploid accessions of P. pleostachyum have shown aposporic embryo-sacs of nucelar origin, and a few meiotic sacs, suggesting facultative apomixis. Identification of the new diploid accessions may prove useful for phylogenetic studies of Paspalum, as well as for breeding programs focusing on the forage potential of species of the Caespitosa group.

Números cromossômicos são reportados para trinta e quatro acessos, representando cinco espécies de Paspalum, grupo Caespitosa. Todos são múltiplos do número básico x=10. Confirmou-se o número diploide 2n=20 para P. chacoense e P. indecorum como, também, a sexualidade para P. indecorum. As contagens cromossômicas são inéditas para P. ligulare (2n=20 e 40), P. pleostachyum (2n=20, 30 e 40) e P. redondense (2n=20 e 40). A meiose foi regular nos diploides, com pareamento em bivalentes na diacinese e metáfase I, enquanto irregularidades, tais como univalentes, trivalentes e quadrivalentes, foram comuns nos poliploides. Acessos diploides de P. pleostachyum e P. ligulare mostraram um único saco embrionário meiótico em cada óvulo, indicando reprodução sexual. O acesso triploide e um dos tetraploides de P. pleostachyum evidenciaram sacos apospóricos e alguns sacos meióticos, sugerindo apomixia facultativa. A identificação dos novos acessos diploides poderá se mostrar bastante útil para o estudo filogenético do gênero, assim como para programas de melhoramento genético focados no potencial forrageiro das espécies do grupo Caespitosa.

Characterization of Brazilian accessions of wild Arachis species of section Arachis (Fabaceae) using heterochromatin detection and fluorescence in situ hybridization (FISH).

The cytogenetic characterization of Arachis species is useful for assessing the genomes present in this genus, for establishing the relationship among their representatives and for understanding the variability in the available germplasm. In this study, we used fluorescence in situ hybridization (FISH) to examine the distribution patterns of heterochromatin and rDNA genes in 12 Brazilian accessions of five species of the taxonomic section Arachis. The heterochromatic pattern varied considerably among the species: complements with centromeric bands in all of the chromosomes (A. hoehnei) and complements completely devoid of heterochromatin (A. gregoryi, A. magna) were observed. The number of 45S rDNA loci ranged from two (A. gregoryi) to eight (A. glandulifera), while the number of 5S rDNA loci was more conserved and varied from two (in most species) to four (A. hoehnei). In some species one pair of 5S rDNA loci was observed adjacent to 45S rDNA loci. The chromosomal markers revealed polymorphism in the three species with more than one accession (A. gregoryi, A. magna and A. valida) that were tested. The previous genome assignment for each of the species studied was confirmed, except for A. hoehnei. The intraspecific variability observed here suggests that an exhaustive cytogenetic and taxonomic analysis is still needed for some Arachis species.

Genetic variation in polyploid forage grass: assessing the molecular genetic variability in the Paspalum genus.

BACKGROUND: Paspalum (Poaceae) is an important genus of the tribe Paniceae, which includes several species of economic importance for foraging, turf and ornamental purposes, and has a complex taxonomical classification. Because of the widespread interest in several species of this genus, many accessions have been conserved in germplasm banks and distributed throughout various countries around the world, mainly for the purposes of cultivar development and cytogenetic studies. Correct identification of germplasms and quantification of their variability are necessary for the proper development of conservation and breeding programs. Evaluation of microsatellite markers in different species of Paspalum conserved in a germplasm bank allowed assessment of the genetic differences among them and assisted in their proper botanical classification. RESULTS: Seventeen new polymorphic microsatellites were developed for Paspalum atratum Swallen and Paspalum notatum Flüggé, twelve of which were transferred to 35 Paspalum species and used to evaluate their variability. Variable degrees of polymorphism were observed within the species. Based on distance-based methods and a Bayesian clustering approach, the accessions were divided into three main species groups, two of which corresponded to the previously described Plicatula and Notata Paspalum groups. In more accurate analyses of P. notatum accessions, the genetic variation that was evaluated used thirty simple sequence repeat (SSR) loci and revealed seven distinct genetic groups and a correspondence of these groups to the three botanical varieties of the species (P. notatum var. notatum, P. notatum var. saurae and P. notatum var. latiflorum). CONCLUSIONS: The molecular genetic approach employed in this study was able to distinguish many of the different taxa examined, except for species that belong to the Plicatula group, which has historically been recognized as a highly complex group. Our molecular genetic approach represents a valuable tool for species identification in the initial assessment of germplasm as well as for characterization, conservation and successful species hybridization.

Cytogenetic analyses in Paspalum L. reveal new diploid species and accessions / Análises citogenéticas em Paspalum L. revelam novas espécies e acessos diplóides

Chromosome numbers were counted in 126 new accessions of 50 Paspalum species from Brazil, Argentina, Paraguay and Bolivia. The chromosome numbers 2n=12, 20, 24, 30, 40, 50, 60, 80 were confirmed. Chromosome numbers for P. arenarium (2n=20), P. barretoi (2n=20), P. aff. ceresia (2n=40), P. corcovadense (2n=20), P. crispulum (2n=20), P. flaccidum (2n=40), P. nummularium (2n=20), P. scalare (2n=20), P. vescum (2n=20) and P. rectum (2n=20) and a diploid cytotype of P. malacophyllum are reported for the first time. The predominance of tetraploid accessions (43.6 percent) was confirmed, but an unusually high number of diploid species (44 percent) and accessions (35.7 percent) was found. These results open new perspectives for breeding programs, phylogenetic studies, and for research on apomixis control, since diploids of Paspalum are typically sexual.

O número cromossômico foi determinado para 126 novos acessos de 50 espécies de Paspalum do Brasil, Argentina, Paraguai e Bolívia. Foram verificados os números somáticos 2n=12, 20, 24, 30, 40, 50, 60 e 80. Estas são as primeiras contagens para P. arenarium (2n=20), P. barretoi (2n=20), P. aff. ceresia (2n=40), P. corcovadense (2n=20), P. crispulum (2n=20), P. flaccidum (2n=40), P. nummularium (2n=20), P. scalare (2n=20), P. vescum (2n=20) e P. rectum (2n=20). O nível diplóide (2n=20) é reportado pela primeira vez para P. malacophyllum. Os dados confirmam a predominância de acessos tetraplóides (43,6 por cento) no gênero e mostram um número incomumente elevado de espécies (44 por cento) e acessos diplóides (35,7 por cento). Estes resultados trazem novas perspectivas para programas de melhoramento, para estudos filogenéticos e para pesquisa orientada ao controle da apomixia, já que em Paspalum as plantas diplóides são tipicamente sexuais.

A preliminary approach to the phylogeny of the genus Paspalum (Poaceae).

The present work intends to clarify the phylogenetic relationships among the species of Paspalum L. belonging to the informal groups Notata/Linearia and Dilatata, and to raise some preliminary hypotheses on the phylogeny of the genus as a whole. A combined dataset including morphological and molecular characters was used to analyze 28 species of Paspalum plus some representatives of related genera of the tribe Paniceae. Analyses were performed using both parsimony and maximum likelihood. The monophyly of Paspalum is not supported nor contradicted. The circumscription of informal groups of Paspalum is discussed, as well as the cladistic treatment of allopolyploid taxa, especially those comprising the Dilatata group. The relationships of members of the Dilatata with their putative progenitors is confirmed, but the monophyly of the group as a whole is not. A close relationship between P. dilatatum Poir. and P. lividum Trin. ex Schltdl. is shown. Our analysis is consistent with the monophyly of a group comprising Notata+Linearia, with a monophyletic Notata group nested within it. The delimitation of the core Notata is proposed by including P. conduplicatum Canto-Dorow, Valls and Longhi-Wagner, P. notatum Flüggé, P. minus E. Fourn., P. pumilum Nees and P. subciliatum Chase.

Chromosome numbers and meiotic behavior of some Paspalum accessions

Chromosome number and meiotic behavior were evaluated in 36 Brazilian accessions of the grass Paspalum (which had never previously been analyzed) to determinate which accessions might be useful in interspecific hybridizations. The analysis showed that one accession of Paspalum coryphaeum was diploid (2n = 2x = 20) and one accession of Paspalum conspersum hexaploid (2n = 6x = 60), the remaining 34 accessions being tetraploid (2n = 4x = 40). The pairing configuration was typical for the ploidy level i.e. in the diploid, chromosomes paired as 10 bivalents, in tetraploids as bi-, tri- and quadrivalents, and in hexaploid as 30 bivalents. A low frequency of meiotic abnormalities (less than 10%) was observed in the diploid, hexaploid and some tetraploid accessions, although the majority of tetraploid accessions showed a high frequency of meiotic irregularities. The use of accessions with a low frequency of meiotic abnormalities in breeding programs is discussed

Localization of the 5S and 45S rDNA sites and cpDNA sequence analysis in species of the Quadrifaria group of Paspalum (Poaceae, Paniceae).

BACKGROUND AND AIMS: The Quadrifaria group of Paspalum (Poaceae, Paniceae) comprises species native to the subtropical and temperate regions of South America. The purpose of this research was to characterize the I genomes in five species of this group and to establish phylogenetic relationships among them. METHODS: Prometaphase chromatin condensation patterns, the physical location of 5S and 45S rDNA sites by fluorescence in situ hybridization (FISH), and sequences of five chloroplast non-coding regions were analysed. KEY RESULTS: The condensation patterns observed were highly conserved among diploid and tetraploid accessions studied and not influenced by the dyes used or by the FISH procedure, allowing the identification of almost all the chromosome pairs that carried the rDNA signals. The FISH analysis of 5S rDNA sites showed the same localization and a correspondence between the number of sites and ploidy level. In contrast, the distribution of 45S rDNA sites was variable. Two general patterns were observed with respect to the location of the 45S rDNA. The species and cytotypes Paspalum haumanii 2x, P. intermedium 2x, P. quadrifarium 4x and P. exaltatum 4x showed proximal sites on chromosome 8 and two to four distal sites in other chromosomes, while P. quarinii 4x and P. quadrifarium 2x showed only distal sites located on a variable number of small chromosomes and on the long arm of chromosome 1. The single most-parsimonious tree found from the phylogenetic analysis showed the Quadrifaria species partitioned in two clades, one of them includes P. haumanii 2x and P. intermedium 2x together with P. quadrifarium 4x and P. exaltatum 4x, while the other contains P. quadrifarium 2x and P. quarinii 4x. CONCLUSIONS: The subdivision found with FISH is consistent with the clades recovered with cpDNA data and both analyses suggest that the Quadrifaria group, as presently defined, is not monophyletic and its species belong in at least two clades.

Novos biótipos pentaplóides do grupo Dilatata de Paspalum L. (Gramineae) no Sul do Brasil / New pentaploid biotypes of the Dilatata group of Paspalum L. (Gramineae) from Southern Brazil

Paspalum dilatatum é uma gramínea nativa da América do Sul subtropical, com bom valor forrageiro e ampla variabilidade intraespecífica. Distintos tipos morfológicos, citológicos e reprodutivos têm sido citados para esta espécie. Paspalum dilatatum "Comum" é o biótipo de maior interesse agronômico. A constatação da importância da espécie como componente da produção de forragem de boa qualidade em campos naturais vem resultando em contínuo interesse pela possibilidade de seu melhor aproveitamento em cultivo. Entre o material do grupo Dilatata submetido à análise, seis acessos de classificação taxonômica não definida apresentaram morfologia distinta dos demais. Acredita-se que sejam resultantes de processos de hibridação natural em combinações antes desconhecidas. A análise mitótica evidenciou que todos possuem 2n=50 cromossomos. Três destes acessos mostraram características morfológicas intermediárias entre os biótipos "Virasoro" (4x, sexual) e "Uruguaiana" (6x, apomítico). A confirmação de ocorrência geográfica próxima reforça a hipótese de hibridação e evidencia uma ampliação da área de ocorrência do biótipo sexual envolvido neste cruzamento. Os outros acessos são, provavelmente, híbridos naturais entre P. dilatatum "Torres" e P. urvillei. Tais acessos mostram a inflorescência com eixo mais longo e com mais ramos que as plantas típicas do biótipo "Torres". A caracterização morfológica e citológica do material discrepante poderá levar ao estabelecimento de parâmetros seguros para sua diferenciação, que permitam sua inclusão em categorias taxonômicas adequadas. Sugere-se a origem destes novos biótipos pentaplóides distintos do "Comum", a partir de cruzamentos ocorridos no Sul do Brasil entre outros dois biótipos e espécies do grupo.