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1.
J Bacteriol ; 195(14): 3201-12, 2013 Jul.
Article in English | MEDLINE | ID: mdl-23667240

ABSTRACT

Flavobacterium johnsoniae cells move rapidly over surfaces by gliding motility. Gliding results from the movement of adhesins such as SprB and RemA along the cell surface. These adhesins are delivered to the cell surface by a Bacteroidetes-specific secretion system referred to as the type IX secretion system (T9SS). GldN, SprE, SprF, and SprT are involved in secretion by this system. Here we demonstrate that GldK, GldL, GldM, and SprA are each also involved in secretion. Nonpolar deletions of gldK, gldL, or gldM resulted in the absence of gliding motility and in T9SS defects. The mutant cells produced SprB and RemA proteins but failed to secrete them to the cell surface. The mutants were resistant to phages that use SprB or RemA as a receptor, and they failed to attach to glass, presumably because of the absence of cell surface adhesins. Deletion of sprA resulted in similar but slightly less dramatic phenotypes. sprA mutant cells failed to secrete SprB and RemA, but cells remained susceptible to some phages and retained some limited ability to glide. The phenotype of the sprA mutant was similar to those previously described for sprE and sprT mutants. SprA, SprE, and SprT are needed for secretion of SprB and RemA but may not be needed for secretion of other proteins targeted to the T9SS. Genetic and molecular experiments demonstrate that gldK, gldL, gldM, and gldN form an operon and suggest that the proteins encoded by these genes may interact to form part of the F. johnsoniae T9SS.


Subject(s)
Adhesins, Bacterial/metabolism , Bacterial Proteins/metabolism , Bacterial Secretion Systems , Flavobacterium/metabolism , Membrane Transport Proteins/metabolism , Bacterial Proteins/genetics , Flavobacterium/genetics , Flavobacterium/physiology , Gene Knockout Techniques , Locomotion , Membrane Transport Proteins/genetics , Operon
2.
Neurosci Lett ; 516(1): 9-14, 2012 May 10.
Article in English | MEDLINE | ID: mdl-22405972

ABSTRACT

Induced pluripotent stem cells (iPSCs) hold tremendous potential both as a biological tool to uncover the pathophysiology of disease by creating relevant cell models and as a source of stem cells for cell-based therapeutic applications. Typically, iPSCs have been derived by the transgenic overexpression of transcription factors associated with progenitor cell or stem cell function in fibroblasts derived from skin biopsies. However, the need for skin punch biopsies to derive fibroblasts for reprogramming can present a barrier to study participation among certain populations of individuals, including children with autism spectrum disorders (ASDs). In addition, the acquisition of skin punch biopsies in non-clinic settings presents a challenge. One potential mechanism to avoid these limitations would be the use of peripheral blood mononuclear cells (PBMCs) as the source of the cells for reprogramming. In this article we describe, for the first time, the derivation of iPSC lines from PBMCs isolated from the whole blood of autistic children, and their subsequent differentiation in GABAergic neurons.


Subject(s)
Child Development Disorders, Pervasive/pathology , GABAergic Neurons/cytology , Leukocytes, Mononuclear/cytology , Tissue Engineering/methods , Cell Differentiation , Cells, Cultured , Child , Humans , Pluripotent Stem Cells
3.
Neurobiol Aging ; 33(8): 1844.e1-9, 2012 Aug.
Article in English | MEDLINE | ID: mdl-22306846

ABSTRACT

Genetic studies on late-onset Alzheimer's disease (AD) have repeatedly mapped susceptibility loci onto chromosome 12q13, encompassing the vitamin D receptor (VDR) gene. Epidemiology studies have indicated vitamin D insufficiency as a risk factor for AD. Given that VDR is the major mediator for vitamin D's actions, we sought to clarify the role of VDR in late-onset AD. We conducted an association study in 492 late-onset AD cases and 496 controls with 80 tagging single nucleotide polymorphisms (SNPs). The strongest association was found at a promoter SNP rs11568820 (P = 9.1 × 10(-6), odds ratio (OR) = 1.69), which resides within the transcription factor Cdx-2 binding site and the SNP has been also known as CDX2. The risk-allele at rs11568820 is associated with lower VDR promoter activity (p < 10(-11)). The overexpression of VDR or vitamin D treatment suppressed amyloid precursor protein (APP) transcription in neuroblastoma cells (p < 0.001). We provide both statistical evidence and functional data suggesting VDR confers genetic risk for AD. Our findings are consistent with epidemiology studies suggesting that vitamin D insufficiency increases the risk of developing AD.


Subject(s)
Alzheimer Disease/epidemiology , Alzheimer Disease/genetics , Homeodomain Proteins/genetics , Receptors, Calcitriol/genetics , Trans-Activators/genetics , Vitamin D Deficiency/epidemiology , Vitamin D Deficiency/genetics , Aged , CDX2 Transcription Factor , Comorbidity , Female , Genetic Predisposition to Disease/epidemiology , Genetic Predisposition to Disease/genetics , Humans , Male , Prevalence , Risk Assessment , United States/epidemiology
4.
J Bacteriol ; 192(5): 1201-11, 2010 Mar.
Article in English | MEDLINE | ID: mdl-20038590

ABSTRACT

Cells of the gliding bacterium Flavobacterium johnsoniae move rapidly over surfaces. Mutations in gldN cause a partial defect in gliding. A novel bacteriophage selection strategy was used to aid construction of a strain with a deletion spanning gldN and the closely related gene gldO in an otherwise wild-type F. johnsoniae UW101 background. Bacteriophage transduction was used to move a gldN mutation into F. johnsoniae UW101 to allow phenotypic comparison with the gldNO deletion mutant. Cells of the gldN mutant formed nonspreading colonies on agar but retained some ability to glide in wet mounts. In contrast, cells of the gldNO deletion mutant were completely nonmotile, indicating that cells require GldN, or the GldN-like protein GldO, to glide. Recent results suggest that Porphyromonas gingivalis PorN, which is similar in sequence to GldN, has a role in protein secretion across the outer membrane. Cells of the F. johnsoniae gldNO deletion mutant were defective in localization of the motility protein SprB to the cell surface, suggesting that GldN may be involved in secretion of components of the motility machinery. Cells of the gldNO deletion mutant were also deficient in chitin utilization and were resistant to infection by bacteriophages, phenotypes that may also be related to defects in protein secretion.


Subject(s)
Bacterial Proteins/metabolism , Flavobacterium/physiology , Locomotion , Bacterial Proteins/genetics , Bacteriophages/growth & development , Chitin/metabolism , Gene Deletion , Gene Order , Genes, Bacterial , Genetics, Microbial/methods , Porphyromonas gingivalis/genetics , Protein Interaction Mapping , Selection, Genetic , Transduction, Genetic
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