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1.
Cytometry A ; 93(7): 737-748, 2018 07.
Article in English | MEDLINE | ID: mdl-30071155

ABSTRACT

Angiosperms have evolved a mechanism of double fertilization, which results in the production of a separate embryo (new individual) and endosperm (nutritive tissue). The flow cytometric seed screen (FCSS) was developed to infer plant reproduction modes based on endosperm-to-embryo DNA content ratio (Pind ). A ratio of 1.5 indicates sexual reproduction, whereas higher values of ≥2.0 are consistent with apomixis. Although FCSS has been successfully applied to the study of sexual and asexual plants, the limits of FCSS and particularly its potential for determination of reproduction modes in hemisexual plants have not been explored. Here, we evaluated the application of FCSS to the study of reproduction modes in two asymmetrically compensating allopolyploids (ACAs), Onosma arenaria and Rosa canina. These two species are characterized by the presence of asexually inherited univalent-forming and sexually inherited bivalent-forming chromosome sets. They both use asymmetric meiosis, which eliminates univalent-forming chromosome sets from the male gamete and retains them in the female gamete. Different chromosomal behavior in male and female meiosis in these plants is reflected in different theoretically derived Pind values, which deviate from a sexual 1.5 value. Here, we determined Pind FCSS-based values in seeds of ACAs, and compared the results to sexual species. As expected, we determined that the mean Pind is 1.51, 1.52, and 1.52 in the sexual plants, that is, Capsella bursa-pastoris, Crataegus monogyna, and O. pseudoarenaria, respectively. In the ACAs, different mean Pind values were determined for O. arenaria (1.61) and R. canina (1.82). These values are consistent with the theoretical Pind values determined based on models of chromosome inheritance. This study highlights the precision of flow cytometry in determining DNA content and it's utility in screening reproduction modes. Additionally, it advocates for more in-depth investigations into rapid screening of accessions where the Pind ratio has deviated from the 1.5 value typical of sexual species, which may indicate meiotic irregularities.


Subject(s)
Chromosomes, Plant/genetics , DNA, Plant/isolation & purification , Flow Cytometry/methods , Reproduction/genetics , Apomixis/genetics , Boraginaceae/genetics , Boraginaceae/growth & development , DNA, Plant/genetics , Endosperm/genetics , Endosperm/growth & development , Polyploidy , Rosa/genetics , Rosa/growth & development , Seeds/genetics , Seeds/growth & development
2.
J Virol Methods ; 111(2): 85-93, 2003 Aug.
Article in English | MEDLINE | ID: mdl-12880923

ABSTRACT

The principal aphid-borne viruses infecting Strawberry (Fragaria spp.) Strawberry crinkle virus (SCV), Strawberry mild yellow edge virus (SMYEV), Strawberry mottle virus (SMoV) and Strawberry vein banding virus (SVBV) can cause serious crop losses. In this paper, a multiplex reverse transcriptase polymerase chain reaction (RT-PCR) method is described for the simultaneous detection of all four viruses in combination with a plant mRNA specific internal control which can be used as an indicator of the effectiveness of the extraction and RT-PCR. In total, 18 strawberry isolates infected naturally were analysed by this method. Every combination of RNA virus was able to be detected and a full complement of all four viruses were found together in three isolates, all taken from wild strawberry (Fragaria chiloensis (L.) Duch.) in Chile. The upper detection limit for the four viruses was at an extract dilution of 1/200. The broad applicability of the RNA specific internal control primers-which produced a PCR fragment of the expected size in 25 of 27 plant species tested-combined with improvements, made in extraction methods described provides potentially a standard method for comparable RT-PCR analyses in a wide variety of plant species.


Subject(s)
Fragaria/virology , Plant Viruses/isolation & purification , RNA Viruses/isolation & purification , Reverse Transcriptase Polymerase Chain Reaction/methods , Animals , Aphids/virology , Atropa belladonna/enzymology , Atropa belladonna/genetics , NADH Dehydrogenase/genetics , Plant Diseases/virology , Plant Viruses/genetics , RNA Viruses/genetics , RNA, Messenger/genetics , RNA, Plant/genetics , RNA, Viral/analysis , RNA, Viral/isolation & purification , Reference Standards , Silicon Dioxide
3.
Arch Virol ; 145(4): 699-709, 2000.
Article in English | MEDLINE | ID: mdl-10893149

ABSTRACT

The 3'-part of the movement protein gene, the intergenic region and the complete coat protein gene of sixteen isolates of Prunus necrotic ringspot virus (PNRSV) from five different host species from the Czech Republic were sequenced in order to search for the bases of extensive variability of viroses caused by this pathogen. According to phylogenetic analyses all the 46 isolates sequenced to date split into three main groups, which correlated to a certain extend with their geographic origin. Modelled serological properties showed that all the new isolates belong to one serotype.


Subject(s)
Ilarvirus/classification , Amino Acid Sequence , Base Sequence , Capsid/analysis , Capsid/chemistry , Ilarvirus/genetics , Molecular Sequence Data , Open Reading Frames , Phylogeny , Plant Viral Movement Proteins , Viral Proteins/genetics
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