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1.
Cytometry B Clin Cytom ; 70(6): 432-42, 2006 Nov 15.
Article in English | MEDLINE | ID: mdl-16977636

ABSTRACT

BACKGROUND: Cytoadhesion of P. falciparum infected red blood cells (RBCs) to endothelial cells (ECs) is an important phenomenon that causes cerebral malaria in man. Reduced adhesion especially in thalassemia and hemoglobinopathies may be related to a protective mechanism against malaria in such people. METHODS: The cytoadherence assay was performed using both conventional and floating conditions between ECs (ECV 304) and P. falciparum infected and noninfected RBCs from both normal and thalassemia subjects. In floating condition, RBC was fluorescently labeled with anti-glycophorin A antibody, whereas EC was identified by surface expression of PECAM-1, CD-36, ICAM-1, and E-selectin. The condition of floating EC was similar to the condition for subcultivation as they can adhere or bind to any surface. The phosphatidylserine (PS) exposure was also determined by using flow cytometer. RESULTS: The adhesion of noninfected heterozygous thalassemic RBCs (all genotypes) to ECs was significantly increased as compared with normal RBCs (P < 0.02). Interestingly, after P. falciparum infection, the number of normal RBCs bound to ECs was significantly increased as compared with noninfected RBCs (P < 0.01), whereas heterozygous thalassemic RBCs infected by P. falciparum showed no significant difference compared with noninfected RBCs. In addition, we found a similar level of PS exposure in normal and thalassemic infected RBCs, which was related to the cytoadherence phenomenon. CONCLUSION: The reduced adhesion between heterozygous thalassemic RBCs infected by P. falciparum to ECs provides an explanation for their protective mechanism against malaria, as increased adhesion is a high risk for cerebral malaria and nonbinding infected RBCs can be removed by the reticuloendothelial system and other mechanism(s) in vivo.


Subject(s)
Endothelial Cells/ultrastructure , Erythrocytes/pathology , Erythrocytes/parasitology , Flow Cytometry/methods , Plasmodium falciparum , Thalassemia/pathology , Animals , Antigens, Differentiation/analysis , Antigens, Differentiation/biosynthesis , Cell Adhesion , Cell Adhesion Molecules/immunology , Endothelial Cells/metabolism , Erythrocytes/metabolism , Humans , Malaria, Cerebral/etiology , Sensitivity and Specificity
2.
FEMS Microbiol Lett ; 205(1): 83-9, 2001 Nov 27.
Article in English | MEDLINE | ID: mdl-11728720

ABSTRACT

Analysis of the nucleotide sequence downstream from the Xanthomonas oryzae pv. oryzae recA gene reveals two orfs designated orfX and recX. The former has the potential to code for a 5.6 kDa protein of unknown function while the latter encodes for a putative 14.6 kDa protein with homology to RecX from various bacteria. Northern blot analysis and RT-PCR results show that recA-orfX-recX are co-regulated and arranged in an operon. A recX mutant was constructed. The mutant has no obvious growth defects or stress response defects, except that it cannot support high-level expression of recA from an expression vector. Introduction of the plasmid containing recA into the recX mutant resulted in reduced transformation efficiency and all transformants tested had mutations with reduced RecA levels. Moreover, the recX mutant has reduced basal levels of RecA. This has not been observed in other bacteria. When inactivated recX was complemented in trans, both changes were reversed. recX mutation has no effect on the regulation of the recA promoter, suggesting that its effect on the RecA level could be post-transcriptional.


Subject(s)
Bacterial Proteins/genetics , Bacterial Proteins/metabolism , DNA-Binding Proteins , Gene Expression Regulation, Bacterial , Rec A Recombinases/genetics , Rec A Recombinases/metabolism , Xanthomonas/genetics , Blotting, Western , Mutation , Physical Chromosome Mapping , Plasmids/genetics , Polymerase Chain Reaction , Transcription, Genetic , Xanthomonas/metabolism , Xanthomonas/physiology
3.
FEMS Microbiol Lett ; 200(1): 111-6, 2001 Jun 12.
Article in English | MEDLINE | ID: mdl-11410358

ABSTRACT

Oxidant induced protection against peroxide killing was investigated in a prawn bacterial pathogen, Vibrio harveyi. Exposure to 250 microM H(2)O(2) induced adaptive protection against subsequent exposure to killing concentrations of H(2)O(2). In addition, 200 microM t-butyl hydroperoxide (tBOOH) induced cross protection to H(2)O(2) killing. On the other hand, peroxide pretreatment did not induce protection against tBOOH killing. Peroxide induced adaptive and cross protection responses required new protein synthesis and were abolished by addition of a protein synthesis inhibitor. Pretreatments of V. harveyi with 250 microM H(2)O(2) and 200 microM tBOOH induced an increase in peroxide scavenging enzymes, catalase and alkyl hydroperoxide reductase subunit C. In addition, stationary phase cells of V. harveyi were more resistant to H(2)O(2) and iodoacetamide killing but highly susceptible to tBOOH killing compared to exponential phase cells. Many aspects of the oxidative stress response of V. harveyi are different from those of other bacteria and these factors may be important for bacterial survival in the environment and during interactions with host shrimp.


Subject(s)
Adaptation, Biological , Bacterial Proteins , Decapoda/microbiology , Hydrogen Peroxide/toxicity , Vibrio/drug effects , Animals , Catalase/biosynthesis , Drug Resistance , Enzyme Induction , Oxidants/toxicity , Oxidative Stress , Peroxidases/biosynthesis , Peroxiredoxins , Vibrio Infections/veterinary
4.
J Bacteriol ; 182(23): 6845-9, 2000 Dec.
Article in English | MEDLINE | ID: mdl-11073935

ABSTRACT

Alkyl hydroperoxide reductase subunit C (AhpC) is the catalytic subunit responsible for alkyl peroxide metabolism. A Xanthomonas ahpC mutant was constructed. The mutant had increased sensitivity to organic peroxide killing, but was unexpectedly hyperresistant to H(2)O(2) killing. Analysis of peroxide detoxification enzymes in this mutant revealed differential alteration in catalase activities in that its bifunctional catalase-peroxidase enzyme and major monofunctional catalase (Kat1) increased severalfold, while levels of its third growth-phase-regulated catalase (KatE) did not change. The increase in catalase activities was a compensatory response to lack of AhpC, and the phenotype was complemented by expression of a functional ahpC gene. Regulation of the catalase compensatory response was complex. The Kat1 compensatory response increase in activity was mediated by OxyR, since it was abolished in an oxyR mutant. In contrast, the compensatory response increase in activity for the bifunctional catalase-peroxidase enzyme was mediated by an unknown regulator, independent of OxyR. Moreover, the mutation in ahpC appeared to convert OxyR from a reduced form to an oxidized form that activated genes in the OxyR regulon in uninduced cells. This complex regulation of the peroxide stress response in Xanthomonas differed from that in other bacteria.


Subject(s)
Catalase/metabolism , DNA-Binding Proteins , Oxidative Stress , Peroxidases/metabolism , Repressor Proteins/metabolism , Transcription Factors/metabolism , Xanthomonas/enzymology , Gene Expression Regulation, Bacterial , Hydrogen Peroxide/pharmacology , Mutagenesis , Peroxidases/genetics , Peroxiredoxins , Repressor Proteins/genetics , Transcription Factors/genetics , Xanthomonas/drug effects , Xanthomonas/genetics
5.
Appl Environ Microbiol ; 66(9): 4017-21, 2000 Sep.
Article in English | MEDLINE | ID: mdl-10966423

ABSTRACT

During plant-microbe interactions and in the environment, Xanthomonas campestris pv. phaseoli is likely to be exposed to high concentrations of multiple oxidants. Here, we show that simultaneous exposures of the bacteria to multiple oxidants affects cell survival in a complex manner. A superoxide generator (menadione) enhanced the lethal effect of an organic peroxide (tert-butyl hydroperoxide) by 1, 000-fold; conversely, treatment of cells with menadione plus H(2)O(2) resulted in 100-fold protection compared to that for cells treated with the individual oxidants. Treatment of X. campestris with a combination of H(2)O(2) and tert-butyl hydroperoxide elicited no additive or protective effect. High levels of catalase alone are sufficient to protect cells against the lethal effect of menadione plus H(2)O(2) and tert-butyl hydroperoxide plus H(2)O(2). These data suggest that H(2)O(2) is the lethal agent responsible for killing the bacteria as a result of these treatments. However, increased expression of individual genes for peroxide (alkyl hydroperoxide reductase, catalase)- and superoxide (superoxide dismutase)-scavenging enzymes or concerted induction of oxidative stress-protective genes by menadione gave no protection against killing by a combination of menadione plus tert-butyl hydroperoxide. However, X. campestris cells in the stationary phase and a spontaneous H(2)O(2)-resistant mutant (X. campestris pv. phaseoli HR) were more resistant to killing by menadione plus tert-butyl hydroperoxide. These findings give new insight into oxidant killing of Xanthomonas spp. that could be generally applied to other bacteria.


Subject(s)
Oxidants/pharmacology , Xanthomonas campestris/drug effects , Xanthomonas campestris/growth & development , Catalase/pharmacology , Drug Resistance, Microbial , Hydrogen Peroxide/pharmacology , Vitamin K/pharmacology , tert-Butylhydroperoxide/pharmacology
6.
Gene ; 241(2): 259-65, 2000 Jan 11.
Article in English | MEDLINE | ID: mdl-10675038

ABSTRACT

Analysis of the Xanthomonas campestris pv. phaseoli (Xp) catalase profile using an activity gel revealed at least two distinct monofunctional catalase isozymes denoted Kat1 and Kat2. Kat1 was expressed throughout growth, whereas Kat2 was expressed only during the stationary phase of growth. The nucleotide sequence of a previously isolated monofunctional catalase gene, Xp katE, was determined. The deduced amino acid sequence of Xp KatE showed a high percentage identity to an atypical group of monofunctional catalases that includes the well-characterized E. coli katE. Expression of Xp katE was growth phase-dependent but was not inducible by oxidants. In addition, growth of Xp in a carbon-starvation medium induced expression of the gene. An Xp katE mutant was constructed, and analysis of its catalase enzyme pattern showed that Xp katE coded for the Kat2 isozyme. Xp katE mutant had resistance levels similar to the parental strain against peroxide and superoxide killing at both exponential and stationary phases of growth. Interestingly, the level of total catalase activity in the mutant was similar to that of the parental strain even in stationary phase. These results suggest the existence of a novel compensatory mechanism for the activity of Xp catalase isozymes.


Subject(s)
Catalase/genetics , Gene Expression Regulation, Bacterial , Gene Expression Regulation, Enzymologic , Xanthomonas campestris/enzymology , Cloning, Molecular , Isoenzymes/genetics , Mutation , Xanthomonas campestris/genetics , Xanthomonas campestris/metabolism
7.
Biochem Pharmacol ; 59(11): 1337-44, 2000 Jun 01.
Article in English | MEDLINE | ID: mdl-10751542

ABSTRACT

Plasmodium falciparum infecting alpha-thalassemic erythrocytes (Hb H or Hb H/Hb Constant Spring) is resistant to artemisinin derivatives. Similar resistance, albeit at a much lower level, is shown by the parasite infecting beta-thalassemia/Hb E erythrocytes. The resistance is due to host-specific factors, one of which is the higher uptake of the drugs by thalassemic erythrocytes than normal erythrocytes, due to binding with Hb H. In addition to higher drug binding, incubation of artemisinin with alpha-thalassemic erythrocytes resulted in preferential inactivation of the drug. Both thalassemic and normal erythrocytes have the capability to inactivate the drug. Addition of serum can protect against inactivation by normal erythrocytes, but not by thalassemic erythrocytes. Incubation with either the hemolysate or the membrane fraction from these erythrocytes also resulted in preferential inactivation of the drug. The drug was also inactivated by purified Hb H. It is concluded that the ineffectiveness of artemisinin derivatives against P. falciparum infecting thalassemic erythrocytes is due partly to competition of the host cell components for binding with the drugs, and partly to inactivation of the drugs by the cell components.


Subject(s)
Antimalarials/pharmacology , Artemisinins , Erythrocytes/metabolism , Plasmodium falciparum/drug effects , Sesquiterpenes/pharmacology , Thalassemia/blood , Animals , Antimalarials/antagonists & inhibitors , Antimalarials/metabolism , Cell Membrane/metabolism , Cytosol/metabolism , Drug Resistance , Hemoglobin H/metabolism , Humans , In Vitro Techniques , Protective Agents/pharmacology , Serum Albumin/pharmacology , Sesquiterpenes/antagonists & inhibitors , Sesquiterpenes/metabolism , Thalassemia/metabolism
8.
FEMS Microbiol Lett ; 181(2): 217-23, 1999 Dec 15.
Article in English | MEDLINE | ID: mdl-10585541

ABSTRACT

Several versions of broad host range (BHR), L-arabinose-inducible expression vectors were constructed. These expression vectors were based on a high copy number BHR pBBR1MCS-4 replicon that could replicate in both enteric and non-enteric Gram-negative bacteria. Two versions of expression cassettes containing multiple cloning sites either with or without a ribosome binding site were placed under transcriptional control of the Escherichia coli BAD promoter and araC gene. Three versions of vectors containing ampicillin or kanamycin or tetracycline resistance genes as selectable markers were constructed. In all six new L-arabinose-inducible BHR expression vectors containing many unique cloning sites, selectable markers were made to facilitate cloning and expression of genes in various Gram-negative bacteria. A Tn9 chloramphenicol acetyl transferase (cat) gene was cloned into an expression vector, resulting in pBBad18Acat that was used to establish optimal expression conditions (addition of 0.02% L-arabinose to mid-exponential phase cells for at least 1 h) in a Xanthomonas campestris pv. phaseoli. Comparison of the Cat enzyme activities between uninduced and a 180-min L-arabinose-induced culture showed a greater than 150-fold increased Cat specific activity. In addition, L-arabinose induction of exponential phase cells harboring pBBad18Acat gave a higher amount of Cat than similarly treated stationary phase cells. The usefulness of the expression vector was also demonstrated in both enteric and non-enteric Gram-negative bacteria.


Subject(s)
Arabinose/pharmacology , Bacterial Proteins , Genetic Vectors/genetics , Transcription Factors , Xanthomonas/genetics , AraC Transcription Factor , Blotting, Western , Chloramphenicol O-Acetyltransferase/genetics , Chloramphenicol O-Acetyltransferase/metabolism , Dose-Response Relationship, Drug , Drug Resistance, Microbial , Escherichia coli/drug effects , Escherichia coli/genetics , Escherichia coli/metabolism , Escherichia coli Proteins , Gene Transfer Techniques , Genetic Vectors/drug effects , Pseudomonas aeruginosa/drug effects , Pseudomonas aeruginosa/genetics , Pseudomonas aeruginosa/metabolism , Repressor Proteins/genetics , Tetracycline/pharmacology , Time Factors , Xanthomonas/drug effects , Xanthomonas/enzymology
9.
Article in English | MEDLINE | ID: mdl-10926260

ABSTRACT

Nowadays, Thailand encounters a serious economic crisis. A clear consensus has been made that a cost-saving system must be the important tool. Both private and government organizations are engaged in this situation. We studied the cost-saving in the clinical laboratory. A questionnaire was distributed to 45 hospital laboratories located in Bangkok. Results showed that efforts to control the cost are the essential policy. There was a variety of factors contributing to the cost-saving process. The usage of public utility, non-recycle material and unnecessary utility were reconsidered. Besides, capital cost (wages and salary) personnel incentive are assessed. Forty three of the 45 respondents had attempted to reduce the cost via curtailing the unnecessary electricity. Eliminating the needless usage of telephone-call. water and unnecessary material was also an effective strategy. A reduction of 86.9%, 80 % and 80.0% of the mentioned factors respectively, was reported. An inventory system of the reagent, chemical and supplies was focused. Most of the laboratories have a policy on cost-saving by decreased the storage. Twenty eight of the 45 laboratories considered to purchase the cheaper with similar quality reagents instead. And some one would purchase a bulky pack when it is the best bargain. A specific system "contact reagent with a free rent instrument" has been used widely (33.3%). Finally, a new personnel management system has been chosen. Workload has rearranged and unnecessary extra-hour work was abandoned.


Subject(s)
Hospital Costs , Laboratories, Hospital/economics , Cost Control/methods , Equipment and Supplies/economics , Hospitals, Private/economics , Hospitals, Public/economics , Humans , Personnel Management/economics , Thailand
10.
Article in English | MEDLINE | ID: mdl-10926261

ABSTRACT

A good laboratory practice is the heart of clinical laboratory quality. One must establish a standard system in order to achieve the quality. However, standard system is not only the technical but also a state of the art. The socioeconomic and culture are the influence factors. At present, technique of reporting the blood smear examination is still a nation controversy. We surveyed the blood smear examination reporting system of the public hospital in Thailand. There were 77 hospitals participated in this study. A questionnaire comprised of 23 questions was distributed to 105 clinical laboratory staffs of the public health hospitals. Results showed that there was a diversity of blood smear examination reporting system. Generally, there were 2 ways of blood smear review. Every smeared slide and only abnormal slides were re-examined by the conventional technique. When an abnormal white blood cell blood picture was observed. The presence of either blast cell or atypical lymphocyte has clinical significance. A majority of laboratory would report in form "counting number of abnormal cell within 100% of the differential count". For other abnormalities of white blood cell; i.e. the neutrophils with toxic granules, most of laboratory reported as "presence". Interestingly, the red blood cell reporting system varied from laboratory to laboratory. There was a total of nine reporting patterns. Results indicated that pattern 4 (few or some, 1+,2+,3+,4+ are 5-10%, 11-25%, 26-50%, 51-75% and 51-100% cell/oil field, respectively) was the most popular one in reporting anisocytosis and poikilocytosis. However, the reporting pattern on red blood cell staining was difference. Pattern 4 and pattern 7 (grading by the size of central pallor) obtained a same popularity on the consideration of hypochromia. But the pattern 9 (few or some, 1+,2+,3+ are 0-1, 1-3, 4-6 and >6 cell/oil field, respectively) was the most frequently used in reporting of polychromasia. Fortunately we found that the reporting system for platelet was not complicated. A majority of laboratory chose the qualitative pattern (reporting as adequate, increased and decreased). Our study indicated that Thai clinical laboratory encounter a diversity of blood smear reporting system. Every clinical laboratory should pay a great attention to this circumstance. Since a good laboratory practice is a knot of the knot-bolt system of healthcare service, therefore, a nation standard system must be established in the near future.


Subject(s)
Hematologic Tests/standards , Laboratories, Hospital/standards , Quality Assurance, Health Care , Hospitals, Public , Humans , Reference Standards , Thailand
11.
Mol Pharmacol ; 53(3): 492-6, 1998 Mar.
Article in English | MEDLINE | ID: mdl-9495816

ABSTRACT

Dihydroartemisinin and other artemisinin derivatives are relatively ineffective against Plasmodium falciparum infecting alpha-thalassemic erythrocytes, namely hemoglobin (Hb) H or HbH/Hb Constant Spring erythrocytes, as compared with those infecting genetically normal erythrocytes. The variant erythrocytes accumulate radiolabeled dihydroartemisinin to a much higher extent than the normal ones, and the accumulated drug was retained after extensive washing, in contrast to the drug in normal erythrocytes which was mostly removed. At initial drug concentration of 1 mM, most (82-88%) of the drug was found in the cytosol fraction of both variant and normal erythrocytes. Binding of the drug to hemoglobins accounted for 40-70% of the total uptake. Hb H accounted for 10.9 +/- 2.7% and 12.4 +/- 6.2% of total protein in HbH and HbH/Hb Constant Spring erythrocytes. HbH bound with 28.7 +/- 6.7% of the drug, whereas HbH/Hb Constant Spring erythrocytes bound with 21.8 +/- 8.3% of the drug. Binding experiments showed that Hb H had 5-7 times the drug-binding capacity of Hb A. For Hb H, the maximum binding capacity (Bmax) = 1.67 +/- 0.17 mol/mol Hb, and the dissociation constant (Kd) = 66 +/- 17 microM, and for Hb A, Bmax = 0.74 +/- 0.18 mol/mol Hb and Kd = 224 +/- 15 microM. It is concluded that preferential binding of dihydroartemisinin to Hb H over Hb A accounts partly for the higher accumulation capacity of the alpha-thalassemic erythrocytes, which leads to its antimalarial ineffectiveness.


Subject(s)
Antimalarials/metabolism , Artemisinins , Erythrocytes/metabolism , Hemoglobin H/metabolism , Sesquiterpenes/metabolism , alpha-Thalassemia/blood , Animals , Antimalarials/pharmacology , Plasmodium falciparum/drug effects
12.
Gene ; 179(1): 33-7, 1996 Nov 07.
Article in English | MEDLINE | ID: mdl-8955626

ABSTRACT

Xanthomonas showed atypical regulation of catalase (Kat) and superoxide dismutase with respect to growth phase and response to various inducers. The highest levels of both enzymes were detected during early log phase of growth and declined as growth continued. This was in contrast to resistance levels to superoxides, H2O2 and organic peroxides, which reached maximum levels during stationary phase. Xanthomonas catalase was induced over six fold by superoxide generators and methyl methane sulfonate but weakly by H2O2. The regulation pattern of these enzymes could be important during plant/microbe interactions. To facilitate elucidation of Xanthomonas kat gene regulation, highly conserved regions of monofuctional Kat amino acid sequences were used to synthesize oligodeoxyribonucleotide primers for use in PCR reactions with Xanthomonas genomic DNA as templates. The Xanthomonas-specific PCR kat probe was used to isolate a functional kat from Xanthomonas campestris pv. phaseoli.


Subject(s)
Catalase/biosynthesis , Gene Expression Regulation, Bacterial , Oxidative Stress/genetics , Superoxide Dismutase/biosynthesis , Xanthomonas/genetics , Species Specificity , Xanthomonas/enzymology , Xanthomonas/growth & development
13.
J Bacteriol ; 178(12): 3578-84, 1996 Jun.
Article in English | MEDLINE | ID: mdl-8655557

ABSTRACT

Catalase is an important protective enzyme against H2O2 toxicity. Here, we report the characterization of a Xanthomonas oryzae pv. oryzae catalase gene (katX). The gene was localized and its nucleotide sequence was determined. The gene codes for a 77-kDa polypeptide. The deduced katX amino acid sequence shares regions of high identity with other monofunctional catalases in a range of organisms from bacteria to eukaryotes. The transcriptional regulation of katX was atypical of bacterial monofunctional kat genes. Northern (RNA) analysis showed that katX transcription was highly induced by treatments with low concentrations of menadione, a superoxide generator, and methyl methanesulfonate, a mutagen. It was only weakly induced by H2O2. Unlike in other bacteria, a high level of catalase in Xanthomonas spp. provided protection from the growth-inhibitory and killing effects of H2O2 but not from those of organic peroxides and superoxide generators. Unexpectedly, heterologous expression of katX in Escherichia coli was both growth phase and temperature dependent. Catalase activity in E. coli kat mutants harboring katX on an expression vector was detectable only when the cells entered the stationary phase of growth and at 28 degrees C. The patterns of transcription regulation, heterologous expression, and physiological function of katX are different from previously studied bacterial kat genes.


Subject(s)
Catalase/genetics , Hydrogen Peroxide/toxicity , Xanthomonas/enzymology , Amino Acid Sequence , Base Sequence , Cloning, Molecular , Enzyme Induction/drug effects , Gene Expression Regulation, Bacterial , Gene Expression Regulation, Enzymologic , Genes, Bacterial , Molecular Sequence Data , Restriction Mapping , Sequence Alignment , Sequence Homology, Amino Acid , Superoxides/pharmacology , Temperature , Xanthomonas/genetics , Xanthomonas/growth & development
14.
Appl Environ Microbiol ; 61(1): 393-6, 1995 Jan.
Article in English | MEDLINE | ID: mdl-16534917

ABSTRACT

The enzymes catalase and superoxide dismutase play major roles in protecting phytopathogenic bacteria from oxidative stress. In Xanthomonas species, these enzymes are regulated by both growth phase and oxygen tension. The highest enzyme levels were detected within 1 h of growth. Continued growth resulted in a decline of both enzyme activities. High oxygen tension was an inducing signal for both enzyme activities. An 80,000-Da monofunctional catalase and a manganese superoxide dismutase were the major forms of the enzymes detected at different stages of growth. The unusual regulatory patterns are common among several Xanthomonas strains tested and may be advantageous to Xanthomonas species during the initial stage of plant-microorganism interactions.

15.
Article in English | MEDLINE | ID: mdl-8629137

ABSTRACT

Drug resistance in tuberculosis (TB) has become a major public health threat, particularly when the disease cannot be 100% controlled by BCG vaccination. In Thailand, resistance to rifampicin, a major component of multidrug regimens of treatment, is the common cause of tuberculosis recurrence. The mechanism of rifampicin resistance involves alterations of the RNA polymerase subunit beta (rpo B) gene. Mutations in rpo B gene were often found to cluster within a region of 23 amino acids starting from amino acid residue 511 to residue 533. Direct PCR sequencing was utilized to compare base changes in rpo B gene in three rifampicin resistant phenotypes of M. tuberculosis isolated from Thai patients. The sequences showed one base substitution at codon 531 resulting in an amino acid change from serine (TCG) to leucine (TTG) in a multidrug resistant isolate compared to that of a sensitive isolate, whereas a point mutation at codon 516 causing a change from aspartic acid (GAC) to tyrosine (TAC) was detected in a multidrug resistant isolate from a HIV positive patient. In an isolate resistant only to rifampicin a double mutation at codon 531 changing serine (TCG) to phenylalanine (TTT) was found. No mutations were observed in the same region in streptomycin, ethambutol or isoniazid resistant isolates. This finding reports two new types of mutation (GAC to TAC at codon 516 and TCG to TTT at codon 531) and confirms a direct correlation between rpo B gene alteration and rifampicin resistant phenotype in M. tuberculosis.


Subject(s)
Drug Resistance, Microbial/genetics , Mycobacterium tuberculosis/genetics , RNA Polymerase II/genetics , Rifampin , Amino Acid Sequence , Base Sequence , DNA Primers , Humans , Molecular Sequence Data , Mycobacterium tuberculosis/enzymology , Mycobacterium tuberculosis/isolation & purification , Polymerase Chain Reaction , Thailand , Tuberculosis/microbiology
16.
Gene ; 143(1): 145-6, 1994 May 27.
Article in English | MEDLINE | ID: mdl-8200531

ABSTRACT

We have modified the positive-selection cloning vector pUN121 to expand the numbers of unique cloning sites by insertion of a multiple cloning site into the lambda cI gene without disrupting its repressor function, resulting in plasmid pSKM10. Plasmid pSKM10 has seven restriction enzyme sites suitable for general cloning purposes. A mobilizable version (pSKM11) of pSKM10 was constructed by insertion of the IncP mob sequence which permitted mobilization of the plasmid into a wide variety of Gram- bacteria.


Subject(s)
Bacteriophage lambda/genetics , Cloning, Molecular/methods , Genetic Vectors , Mutagenesis, Insertional/methods , Plasmids/genetics , Amino Acid Sequence , Base Sequence , DNA Transposable Elements , DNA, Viral , Genes, Viral , Molecular Sequence Data , Repressor Proteins/genetics
17.
Gene ; 124(1): 131-2, 1993 Feb 14.
Article in English | MEDLINE | ID: mdl-8382651

ABSTRACT

We have built a series of useful gene cassette plasmids to facilitate the construction of generalized and specialized cloning vectors. The gene cassettes consist of two promoter-less genes, cat and gus, a selectable marker gene (tet) and an IncP mob sequence. All of these genes in the cassette vectors are flanked by many unique restriction sites to facilitate their use in the construction of cloning vectors.


Subject(s)
Cloning, Molecular/methods , Mutagenesis, Insertional , Amino Acid Oxidoreductases/genetics , Chloramphenicol O-Acetyltransferase/genetics , Chloramphenicol O-Acetyltransferase/metabolism , DNA Transposable Elements , Genes, Bacterial , Genetic Markers , Genetic Vectors , Glucuronidase/genetics , Plasmids , Promoter Regions, Genetic , Restriction Mapping , Tetracycline Resistance/genetics
18.
J Med Assoc Thai ; 73(4): 202-5, 1990 Apr.
Article in English | MEDLINE | ID: mdl-2394956

ABSTRACT

Thirty-two unconcentrated urines were electrophoresed on cellogels in 0.05 M barbital buffer, pH 8.6, at 280 volts for 35 minutes. Instead of concentrating 100 fold, the urine samples were directly applied on the gel in volumes from 1.2 to 3.6 microliters and Coomassie dye was used for staining. This makes it possible to observe the protein patterns at trace concentration by reagent strips (about 0.05-0.2 g/l). This method is simple, convenient and suited for routine services.


Subject(s)
Electrophoresis/methods , Proteinuria/urine , Humans
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